BAC Information

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BAC

Clone NameB6Ng01-068B23
Chromosome12 (Build37)
Map Location 90,422,616 - 90,446,706
singlet/doubletdoublet
Overlap geneNrxn3
Upstream geneEG638008, EG666862, EG435337, LOC100039154, LOC633093, LOC667440, LOC100039383, EG266459, LOC667475, LOC620915, LOC435314, Adck1, LOC100039261, EG666915
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068B23.bB6Ng01-068B23.g
ACCDH886804DH886805
length1,121879
definitionDH886804|Mus musculus domesticus DNA, BAC clone: B6Ng01-068B23, 5' end.DH886805|Mus musculus domesticus DNA, BAC clone: B6Ng01-068B23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,445,570 - 90,446,706)(90,422,616 - 90,423,491)
sequence
gaattcatgagtgcagcagctctatcacgtccaaaagacattactgtttt
gcaacattcctgcccaacctctgagttttatgcaagaaatatttggaatc
atcctgatgtgtatgcccttgtagcttgagagtctccctttgtcttattc
ttttgtccctgaacttcaaaatgattaaatctctattcagaagcaaaaca
caatggtgacaggtgacttctgattctttgctccaatgggactatcagaa
tctgcagtgatttgtccttccttgacactgctgattagaatgcccttccc
tgggaacctcctgcttatttggcttacatgataccattttctttctggtg
attctcttaatttttttaggtctaccctcccttaaattttggtttctttg
aatacgtgtgcaatctttaacattgctcttcctaggttttctgtattctg
attaaagttatagtcttaactatataaactgaacgctaatctccacggaa
acaagtgcctccaactcaacgtatcaaaaatagcacaaactcctcccaaa
tctccgaattctatgtcactgtggtgctttgaataggttatatggtctcc
agagatttgtgtgtttgaatgtttccctataggaagtgtggcactatgaa
gaggtgtggttattgcagaggacgtatgtcattagggataggctttaagg
tttcagatactcaaaccaagcccagtgttacattctcaccctgctacctg
ccaatctagaactctcagttacctttccagtaccaggtctgctgcatacc
accgcaattcctgccatgatgataattgactaaatctctgaactataagc
cagccccaacaaatgttttcttttataaaaataactgtggtaatggtgtc
tcttcacaacaatagaaaccctaacaaatctaccttccttattacattat
attgacaatatcagctttcgtctactgcttagactaaatctaagaaacag
catacagtatctctctggactttataagttgtgttttaaacaaacaaact
actgttgcaaatgactgtagcatttctaagaacgagttgtgtgtgatata
aatcgtttgtcaaaaagccaa
gaattctcagtagaaaaggaagcatttcttttggtaagcagatgtggcta
acctggggggtgggagtgggggcatagttgattatgactcatttacttag
tgtcagtttgacttacaagtccacagctccctggaatcactcaggacctt
agagaggttagctgggagcatgtggcatatcctgagtgattatcacaggg
acagataaagtccagaagtctttcaaatcctgattatactgtgtcatctt
ggacactcactgactcttaggcatcaacctttttcttcataacataaagg
cattaaatcaggcaatccctaaaataccttgtaatttgaaaacttattgt
tttgacagatttcttctctaattatatggaaaatattaagcatggtctgg
tacattaaataacatccttgtaccttgcttttttgtgtgtcaagattgtc
ccctttgaagggtcctccaatgattaatgtaaactctgcattgctctcct
ggctcatcattctatctaggtggtcacagtgcatagttcaggtttttaca
gaagacacccattagttggccatgtgtagtacaaaggaccacccagcagt
tgtgcatgtccctctctgtagagagagagctgagttatgacaactgcatc
tgattatcttctgttctagatcagtgtcgtttccaggtctgttgtctagt
tgtattttaacaaatatgttttatcacaaatgagaaagagagattatgat
aatagacagggcaatagagattatttttgaatgtatttcagacacacaga
cagtgtcaagtttctgcttcctgacttttttgaggctagtttttgaaaac
atgcaccagacataaatacattgtgtgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_90445570_90446706
seq2: B6Ng01-068B23.b_43_1163 (reverse)

seq1  TTGGCTTTTCTGACCATACGATTTATATCACAACAACCAAACTCTGTCTT  50
      ||||||||| ||| || ||||||||||||||    ||  ||||| ||  |
seq2  TTGGCTTTT-TGA-CAAACGATTTATATCAC----ACACAACTC-GTTCT  43

seq1  TAGAAATGGCTACAGGTCAATATGCAAACAGGTAGTTGTGTTTGTTTTAA  100
      ||||||| |||||| ||| || ||| |||| |||||| |||||| |||||
seq2  TAGAAAT-GCTACA-GTC-ATTTGC-AACA-GTAGTT-TGTTTG-TTTAA  86

seq1  AACACAACTTTATAAAGGTCCAGAGAGATACTGTATGCTGTTTCTTAGAT  150
      |||||||| ||||||| |||||||||||||||||||||||||||||||||
seq2  AACACAAC-TTATAAA-GTCCAGAGAGATACTGTATGCTGTTTCTTAGAT  134

seq1  TTAGTCTAAGCAGTAGACGAAAGCTGATATTGTCAATATAATGTAATAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTAAGCAGTAGACGAAAGCTGATATTGTCAATATAATGTAATAAG  184

seq1  GAAGGTAGATTTGTTAGGGTTTCTATTGTTGTGAAGAGACACCATTACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTAGATTTGTTAGGGTTTCTATTGTTGTGAAGAGACACCATTACCA  234

seq1  CAGTTATTTTTATAAAAGAAAACATTTGTTGGGGCTGGCTTATAGTTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATTTTTATAAAAGAAAACATTTGTTGGGGCTGGCTTATAGTTCAG  284

seq1  AGATTTAGTCAATTATCATCATGGCAGGAATTGCGGTGGTATGCAGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAGTCAATTATCATCATGGCAGGAATTGCGGTGGTATGCAGCAGA  334

seq1  CCTGGTACTGGAAAGGTAACTGAGAGTTCTAGATTGGCAGGTAGCAGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTACTGGAAAGGTAACTGAGAGTTCTAGATTGGCAGGTAGCAGGGT  384

seq1  GAGAATGTAACACTGGGCTTGGTTTGAGTATCTGAAACCTTAAAGCCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGTAACACTGGGCTTGGTTTGAGTATCTGAAACCTTAAAGCCTAT  434

seq1  CCCTAATGACATACGTCCTCTGCAATAACCACACCTCTTCATAGTGCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAATGACATACGTCCTCTGCAATAACCACACCTCTTCATAGTGCCAC  484

seq1  ACTTCCTATAGGGAAACATTCAAACACACAAATCTCTGGAGACCATATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTATAGGGAAACATTCAAACACACAAATCTCTGGAGACCATATAA  534

seq1  CCTATTCAAAGCACCACAGTGACATAGAATTCGGAGATTTGGGAGGAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCAAAGCACCACAGTGACATAGAATTCGGAGATTTGGGAGGAGTT  584

seq1  TGTGCTATTTTTGATACGTTGAGTTGGAGGCACTTGTTTCCGTGGAGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTATTTTTGATACGTTGAGTTGGAGGCACTTGTTTCCGTGGAGATT  634

seq1  AGCGTTCAGTTTATATAGTTAAGACTATAACTTTAATCAGAATACAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTTCAGTTTATATAGTTAAGACTATAACTTTAATCAGAATACAGAAA  684

seq1  ACCTAGGAAGAGCAATGTTAAAGATTGCACACGTATTCAAAGAAACCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGGAAGAGCAATGTTAAAGATTGCACACGTATTCAAAGAAACCAAA  734

seq1  ATTTAAGGGAGGGTAGACCTAAAAAAATTAAGAGAATCACCAGAAAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGGGAGGGTAGACCTAAAAAAATTAAGAGAATCACCAGAAAGAAA  784

seq1  ATGGTATCATGTAAGCCAAATAAGCAGGAGGTTCCCAGGGAAGGGCATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATCATGTAAGCCAAATAAGCAGGAGGTTCCCAGGGAAGGGCATTC  834

seq1  TAATCAGCAGTGTCAAGGAAGGACAAATCACTGCAGATTCTGATAGTCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGCAGTGTCAAGGAAGGACAAATCACTGCAGATTCTGATAGTCCC  884

seq1  ATTGGAGCAAAGAATCAGAAGTCACCTGTCACCATTGTGTTTTGCTTCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGCAAAGAATCAGAAGTCACCTGTCACCATTGTGTTTTGCTTCTG  934

seq1  AATAGAGATTTAATCATTTTGAAGTTCAGGGACAAAAGAATAAGACAAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGATTTAATCATTTTGAAGTTCAGGGACAAAAGAATAAGACAAAG  984

seq1  GGAGACTCTCAAGCTACAAGGGCATACACATCAGGATGATTCCAAATATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACTCTCAAGCTACAAGGGCATACACATCAGGATGATTCCAAATATT  1034

seq1  TCTTGCATAAAACTCAGAGGTTGGGCAGGAATGTTGCAAAACAGTAATGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCATAAAACTCAGAGGTTGGGCAGGAATGTTGCAAAACAGTAATGT  1084

seq1  CTTTTGGACGTGATAGAGCTGCTGCACTCATGAATTC  1137
      |||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGACGTGATAGAGCTGCTGCACTCATGAATTC  1121

seq1: chr12_90422616_90423491
seq2: B6Ng01-068B23.g_65_943

seq1  GAATTCTCAGTAGAAAAGGAAGCATTTCTTTTGGTAAGCAGATGTGGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTAGAAAAGGAAGCATTTCTTTTGGTAAGCAGATGTGGCTA  50

seq1  ACCTGGGGGGTGGGAGTGGGGGCATAGTTGATTATGACTCATTTACTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGGGGTGGGAGTGGGGGCATAGTTGATTATGACTCATTTACTTAG  100

seq1  TGTCAGTTTGACTTACAAGTCCACAGCTCCCTGGAATCACTCAGGACCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTTTGACTTACAAGTCCACAGCTCCCTGGAATCACTCAGGACCTT  150

seq1  AGAGAGGTTAGCTGGGAGCATGTGGCATATCCTGAGTGATTATCACAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGTTAGCTGGGAGCATGTGGCATATCCTGAGTGATTATCACAGGG  200

seq1  ACAGATAAAGTCCAGAAGTCTTTCAAATCCTGATTATACTGTGTCATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATAAAGTCCAGAAGTCTTTCAAATCCTGATTATACTGTGTCATCTT  250

seq1  GGACACTCACTGACTCTTAGGCATCAACCTTTTTCTTCATAACATAAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACTCACTGACTCTTAGGCATCAACCTTTTTCTTCATAACATAAAGG  300

seq1  CATTAAATCAGGCAATCCCTAAAATACCTTGTAATTTGAAAACTTATTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATCAGGCAATCCCTAAAATACCTTGTAATTTGAAAACTTATTGT  350

seq1  TTTGACAGATTTCTTCTCTAATTATATGGAAAATATTAAGCATGGTCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACAGATTTCTTCTCTAATTATATGGAAAATATTAAGCATGGTCTGG  400

seq1  TACATTAAATAACATCCTTGTACCTTGCTTTTTTGTGTGTCAAGATTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTAAATAACATCCTTGTACCTTGCTTTTTTGTGTGTCAAGATTGTC  450

seq1  CCCTTTGAAGGGTCCTCCAATGATTAATGTAAACTCTGCATTGCTCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGAAGGGTCCTCCAATGATTAATGTAAACTCTGCATTGCTCTCCT  500

seq1  GGCTCATCATTCTATCTAGGTGGTCACAGTGCATAGTTCAGGTTTTTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATCATTCTATCTAGGTGGTCACAGTGCATAGTTCAGGTTTTTACA  550

seq1  GAAGACACCCATTAGTTGGCCATGTGTAGTACAAAGGACCACCCAGCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACACCCATTAGTTGGCCATGTGTAGTACAAAGGACCACCCAGCAGT  600

seq1  TGTGCATGTCCCTCTCTGTAGAGAGAGAGCTGAGTTATGACAACTGCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGTCCCTCTCTGTAGAGAGAGAGCTGAGTTATGACAACTGCATC  650

seq1  TGATTATCTTCTGTTCTAGATCAGTGTCGTTTCCAGGTCTGTTGTCTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATCTTCTGTTCTAGATCAGTGTCGTTTCCAGGTCTGTTGTCTAGT  700

seq1  TGTATTTTAACAAATATGTTTTATCACAAATGAG-AAGAGAGATTATGAT  749
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGTATTTTAACAAATATGTTTTATCACAAATGAGAAAGAGAGATTATGAT  750

seq1  AATAGACAGGGCAATAGAGATTA-TTTTGAATGTATTTCAGACACACAGA  798
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AATAGACAGGGCAATAGAGATTATTTTTGAATGTATTTCAGACACACAGA  800

seq1  CAGTGTCAAGTTTCTGCTTCCTGAC-TTTTTGAGGCTAG-TTTTGAAAAC  846
      ||||||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  CAGTGTCAAGTTTCTGCTTCCTGACTTTTTTGAGGCTAGTTTTTGAAAAC  850

seq1  ATGCACCAGACATAAATACATGTGTGTGTG  876
      ||||||||||||||||||||| |||||| |
seq2  ATGCACCAGACATAAATACAT-TGTGTGAG  879