BAC Information

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BAC

Clone NameB6Ng01-068H22
Chromosome12 (Build37)
Map Location 37,463,210 - 37,464,321
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043579, LOC669866, Agr3, Agr2, Tspan13, EG432649, Bzw2, Ankmy2, 1700108M19Rik, Sostdc1, 4930579E17Rik, LOC638858
Downstream geneMeox2, A530016O06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068H22.bB6Ng01-068H22.g
ACCDH887067DH887068
length1,2401,103
definitionDH887067|Mus musculus domesticus DNA, BAC clone: B6Ng01-068H22, 5' end.DH887068|Mus musculus domesticus DNA, BAC clone: B6Ng01-068H22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgcttaaagcagagggaattccttgaattcatgccagcatga
ggctttaaggcttaggagacttaaaagcaaacaaacaaacacccatctct
tgtctcttctgctctttatgtggcccctcaggaaaggcaactttatttct
ctagcaaagagctccatttcttgttctgaggctgtagtctctgatgcaga
gaccctttcttttgcttattttaaaggtgtcactcattcctgggtgactg
gcaacaaccatgttctctttcaaagacttcaagaaagtgaagggacacca
ggtggtggtggtgcatgcctttaatcccagcacttgggaggcagaggcag
gtggatttctgagttcgaggccagcctggtctacagagtgagttccagga
cagccagagctacacagaaaaaccctgtcttgaaaacaaacaaacaaaca
aacaaacaaacaaacaagaaagtgaagggacaaggctggttcccccttct
ctagtccaagatttttacattccatcaatgaataaaaaattctccttaaa
atggggatacccaccggatgttcccagacaccaaggaaaagaaaggcttc
caggacccaacagttatgattttagcagagaaggggagatagaacctgaa
gagaccacctccagtagataggtatggcccctagttgtgggacagggcct
cacacccatctcaaagtttttaactcagtaatgtttctattcaaaagaag
aacagggacaagaaatggagtagagactaaaggatggaccatccaaggac
tgccccatctggagatccatcatgtctgcagacaccaaacctgatattga
tgcccttgccaagaggcactggctgacaggaacctggtatgactgtttct
tggaggtcagccagcaactgaccaatacagatgtggatgcttggatccaa
ccattaaactgagctcaggaccctggtcaggagctggcagaaagactgta
ggagctgaggggattgcaacctcatagaaagaacaacgttagcgctggac
cacccagtgcttcaaggactagacaccaccaggagtgtacgaaaaggatc
atgtttgagacatgaagcagatggcttgtctgaatcatgggaggggaaag
ccctgtatctggaaggttaagttcagcttaagggagatggaggaaggcgt
gtatggaacactctcataaaaaagggagcgagagagcgat
gaattctatctctcttgcatcatttcaatcatattcctagctggtggggt
gaaagtatctacttcataatagaagctacaccacaaagaaaggaggatgg
tgaaaaactggactaggagactgaagactggattctagccttaggcctta
gacttttttttatcttttatatatgtatatttttttacactttattccct
tcctggtccaccctctgactgttccacatcccataccttcttgggtggct
gacttatgcatagctgaccagaacctcaatttccaccactatgtcaggga
tattcctgattcaccctatcttatggtaatcaagataagaaacaggctat
ctctttacatcccaggacatcacccgcatttgagatatcagccatgtgca
ccatgccaaagactcaggaacgttgttattacgaactggaacttggaagg
catttcataagtgtggcagatggaaatatggaaggatggctcggctgaag
gaagaaggaaacatattcaatagcagcagaatcagaagtcctagcttgaa
aatctgcagttcaaggaggagaaagcttagcgcactagaatcacttacgc
catttatttcccttggcctagaattacgatgtctttcttaaataaaccca
ttgttggtccaggctgccagcaaatgatgtgcaggtccaaggcctactct
gaagtgttttgttggctgaatttcttggaatgataatcaattaaaatatt
tttcttgtgctttttgactggcaacgtttctgagctggagtaggcttaca
aggaaaacaagattctctgctacttgcccactatcagcacagcaacgttt
tcccttatggaagacgatcatcaagagaaatttcaggtaacaaaacgatt
ggtaaaagtttctctccctaccatggaagactgatgctactgaaaagaga
taagctgatgaaagcatatatatgtatagtcacactatgttctgccctct
attaatgcatggagatacacacatgcccatgtgtgttttttatgtttaac
ggtttggaaaaatttcttaaatacaggcaaactgggactcattattgagt
cca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_37463210_37464321
seq2: B6Ng01-068H22.g_68_1170

seq1  GAATTCTATCTCTCTTGCATCATTTCAATCATATTCCTAGCTGGTGGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCTCTCTTGCATCATTTCAATCATATTCCTAGCTGGTGGGGT  50

seq1  GAAAGTATCTACTTCATAATAGAAGCTACACCACAAAGAAAGGAGGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTATCTACTTCATAATAGAAGCTACACCACAAAGAAAGGAGGATGG  100

seq1  TGAAAAACTGGACTAGGAGACTGAAGACTGGATTCTAGCCTTAGGCCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAACTGGACTAGGAGACTGAAGACTGGATTCTAGCCTTAGGCCTTA  150

seq1  GACTTTTTTTTATCTTTTATATATGTATATTTTTTTACACTTTATTCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTTTTTATCTTTTATATATGTATATTTTTTTACACTTTATTCCCT  200

seq1  TCCTGGTCCACCCTCTGACTGTTCCACATCCCATACCTTCTTGGGTGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGTCCACCCTCTGACTGTTCCACATCCCATACCTTCTTGGGTGGCT  250

seq1  GACTTATGCATAGCTGACCAGAACCTCAATTTCCACCACTATGTCAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATGCATAGCTGACCAGAACCTCAATTTCCACCACTATGTCAGGGA  300

seq1  TATTCCTGATTCACCCTATCTTATGGTAATCAAGATAAGAAACAGGCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTGATTCACCCTATCTTATGGTAATCAAGATAAGAAACAGGCTAT  350

seq1  CTCTTTACATCCCAGGACATCACCCGCATTTGAGATATCAGCCATGTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTACATCCCAGGACATCACCCGCATTTGAGATATCAGCCATGTGCA  400

seq1  CCATGCCAAAGACTCAGGAACGTTGTTATTACGAACTGGAACTTGGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCAAAGACTCAGGAACGTTGTTATTACGAACTGGAACTTGGAAGG  450

seq1  CATTTCATAAGTGTGGCAGATGGAAATATGGAAGGATGGCTCGGCTGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCATAAGTGTGGCAGATGGAAATATGGAAGGATGGCTCGGCTGAAG  500

seq1  GAAGAAGGAAACATATTCAATAGCAGCAGAATCAGAAGTCCTAGCTTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGAAACATATTCAATAGCAGCAGAATCAGAAGTCCTAGCTTGAA  550

seq1  AATCTGCAGTTCAAGGAGGAGAAAGCTTAGCGCACTAGAATCACTTACGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCAGTTCAAGGAGGAGAAAGCTTAGCGCACTAGAATCACTTACGC  600

seq1  CATTTATTTCCCTTGGCCTAGAATTACGATGTCTTTCTTAAATAAACCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTTCCCTTGGCCTAGAATTACGATGTCTTTCTTAAATAAACCCA  650

seq1  TTGTTGGTCCAGGCTGCCAGCAAATGATGTGCAGGTCCAAGGCCTACTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGTCCAGGCTGCCAGCAAATGATGTGCAGGTCCAAGGCCTACTCT  700

seq1  GAAGTGTTTTGTTGGCTGAATTTCTTGGAATGATAATCAATTAAAATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTTTTGTTGGCTGAATTTCTTGGAATGATAATCAATTAAAATATT  750

seq1  TTTCTTGTGCTTTTTGACTGGCAACGTTTCTGAGCTGGAGTAGGCTTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTGCTTTTTGACTGGCAACGTTTCTGAGCTGGAGTAGGCTTACA  800

seq1  AGGAAAACAAGATTCTCTGCTACTTGCCCACTATCAGCACAGCAACGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAACAAGATTCTCTGCTACTTGCCCACTATCAGCACAGCAACGTTT  850

seq1  TCCCTTATGGAAGACGATCATCAAGAGAAAATTTCAGGTAACAAAAACGA  900
      ||||||||||||||||||||||||||| |||||||||||||| |||||||
seq2  TCCCTTATGGAAGACGATCATCAAGAG-AAATTTCAGGTAAC-AAAACGA  898

seq1  TTGGTAAAAGTTTCTCTCCCCTAACCATGGAAGACTGATGCTACTGAAAA  950
      ||||||||||||||||||||   |||||||||||||||||||||||||||
seq2  TTGGTAAAAGTTTCTCTCCC--TACCATGGAAGACTGATGCTACTGAAAA  946

seq1  GAAGATAAAGCTGATGAAAGCATATATATGTATAGTCACACTATGTTCTG  1000
      | |||| |||||||||||||||||||||||||||||||||||||||||||
seq2  G-AGAT-AAGCTGATGAAAGCATATATATGTATAGTCACACTATGTTCTG  994

seq1  CCCTCTATATATGCATGGAGATACACACATGCCCATGTGTG-TTTATATG  1049
      ||||||||  ||||||||||||||||||||||||||||||| ||| ||||
seq2  CCCTCTATTAATGCATGGAGATACACACATGCCCATGTGTGTTTTTTATG  1044

seq1  TTTTAACGTTTTGGAGATATTTTCATAAAATACAGCCAAACTTGGACTCA  1099
       ||||||| |||||| | ||||   | |||||||| |||||| |||||||
seq2  -TTTAACGGTTTGGAAAAATTT--CTTAAATACAGGCAAACTGGGACTCA  1091

seq1  TTATTGTAGTCCA  1112
      |||||| ||||||
seq2  TTATTG-AGTCCA  1103