BAC Information

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BAC

Clone NameB6Ng01-070F08
Chromosome12 (Build37)
Map Location 8,690,116 - 8,824,297
singlet/doubletdoublet
Overlap genePum2, F730043H23, Sdc1
Upstream geneEG668388, Apob, 1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154
Downstream geneLaptm4a, Matn3, Wdr35, Ttc32, LOC633030, LOC100042238, Osr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070F08.bB6Ng01-070F08.g
ACCDH888369DH888370
length956328
definitionDH888369|Mus musculus domesticus DNA, BAC clone: B6Ng01-070F08, 5' end.DH888370|Mus musculus domesticus DNA, BAC clone: B6Ng01-070F08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,690,116 - 8,691,073)(8,823,992 - 8,824,297)
sequence
gaattctggcatggaatttacaattaaagtaaacttagaatttatttact
agttttattattactagtcttaccattcaatacctgcttttgttttttta
aatacaaattttattttgtatgatagtcctagaattttctgtttaaagaa
catagaataagttttaagtcgtgctgaagaatcttattcacaacccctct
taaaaatgtttttatgtatgtgggtgttttgcctatgtatatgtctgtgc
accatgtgtgtgcctggtattcaaagaaaccagaaggtgttgttggatct
cttagaactagaatttcagacaattgttatctgtgatattggtgctggga
attgaatccaggtcctctggaaaagcagtcacttagtgctcttaacagct
gagctatctctccagccctgcagccctggagcttgtcatctttaggatat
tttgattgttggtgagaagaaaatgatcaagaattcatggtttatttgaa
tgtctgaggggaaaagaatttcaattcatcattatctaaaaaagactcta
ttcaatttagatttgtacaaaccatatattttacactatttcatagataa
caataaacattttaaagcttttaactgttaaaaggtgttaattgttaaac
gccacaaatcattataaagttaagactattttatatagcctatatggaaa
agtacatatgttctttttttttttttttaagttgtctaggggaagttact
gggtttttttcccttggtattttttgtgttaacatttgcttaaaatgtta
ccatgagagattgcgagatgtcttagttggtagagtacctggcacatagt
catgaaaatcttattttggattcccagatggaacccacataaaaagccag
gcaaataatgcatatctataaccccatttgtgtgtgtgtgtgtgtggtgg
tggtgg
aacagattgtttgcacgggcatacatacatacatacatacatacatacat
agacacatacagagagagagagagagagagagagagtcccctccaatgga
aaggcaaatcaccttgaaattaacctcttttctaggagaaagtaatatag
cagcaggaagaatgacccaaggtaataaaacttttgtaacataataaggc
agaactctctctttttttgttgttttacatttgtatttatttattcattt
agttattcatgtatatgtatgtatgtatgtgtgtatgtatgtatgtatgt
gcgtgcgatcagtcggttggtgggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_8690116_8691073
seq2: B6Ng01-070F08.b_46_1001

seq1  GAATTCTGGCATGGAATTTACAATTAAAGTAAACTTAGAATTTATTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGCATGGAATTTACAATTAAAGTAAACTTAGAATTTATTTACT  50

seq1  AGTTTTATTATTACTAGTCTTACCATTCAATACCTGCTTTTGTTTTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTATTATTACTAGTCTTACCATTCAATACCTGCTTTTGTTTTTTTA  100

seq1  AATACAAATTTTATTTTGTATGATAGTCCTAGAATTTTCTGTTTAAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAATTTTATTTTGTATGATAGTCCTAGAATTTTCTGTTTAAAGAA  150

seq1  CATAGAATAAGTTTTAAGTCGTGCTGAAGAATCTTATTCACAACCCCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAATAAGTTTTAAGTCGTGCTGAAGAATCTTATTCACAACCCCTCT  200

seq1  TAAAAATGTTTTTATGTATGTGGGTGTTTTGCCTATGTATATGTCTGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGTTTTTATGTATGTGGGTGTTTTGCCTATGTATATGTCTGTGC  250

seq1  ACCATGTGTGTGCCTGGTATTCAAAGAAACCAGAAGGTGTTGTTGGATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTGTGTGCCTGGTATTCAAAGAAACCAGAAGGTGTTGTTGGATCT  300

seq1  CTTAGAACTAGAATTTCAGACAATTGTTATCTGTGATATTGGTGCTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAACTAGAATTTCAGACAATTGTTATCTGTGATATTGGTGCTGGGA  350

seq1  ATTGAATCCAGGTCCTCTGGAAAAGCAGTCACTTAGTGCTCTTAACAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATCCAGGTCCTCTGGAAAAGCAGTCACTTAGTGCTCTTAACAGCT  400

seq1  GAGCTATCTCTCCAGCCCTGCAGCCCTGGAGCTTGTCATCTTTAGGATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATCTCTCCAGCCCTGCAGCCCTGGAGCTTGTCATCTTTAGGATAT  450

seq1  TTTGATTGTTGGTGAGAAGAAAATGATCAAGAATTCATGGTTTATTTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTGTTGGTGAGAAGAAAATGATCAAGAATTCATGGTTTATTTGAA  500

seq1  TGTCTGAGGGGAAAAGAATTTCAATTCATCATTATCTAAAAAAGACTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAGGGGAAAAGAATTTCAATTCATCATTATCTAAAAAAGACTCTA  550

seq1  TTCAATTTAGATTTGTACAAACCATATATTTTACACTATTTCATAGATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTTAGATTTGTACAAACCATATATTTTACACTATTTCATAGATAA  600

seq1  CAATAAACATTTTAAAGCTTTTAACTGTTAAAAGGTGTTAATTGTTAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAACATTTTAAAGCTTTTAACTGTTAAAAGGTGTTAATTGTTAAAC  650

seq1  GCCACAAATCATTATAAAGTTAAGACTATTTTATATAGCCTATATGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAAATCATTATAAAGTTAAGACTATTTTATATAGCCTATATGGAAA  700

seq1  AGTACATATGTTCTTTTTTTTTTTTTTTAAGTTGTCTAGGGGAAGTTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATATGTTCTTTTTTTTTTTTTTTAAGTTGTCTAGGGGAAGTTACT  750

seq1  GGGTTTTTTTCCCTTGGTATTTTTTGTGTTAACATTTGCTTAAAATGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTTTTCCCTTGGTATTTTTTGTGTTAACATTTGCTTAAAATGTTA  800

seq1  CCATGAGAGATTGCGAGATGTCTTAGTTGGTAGAGTACCTGGCACATAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGAGATTGCGAGATGTCTTAGTTGGTAGAGTACCTGGCACATAGT  850

seq1  CATGAAAATCTTATTTTGGATTCCCAGATGGAACCCACATAAAAAGCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAATCTTATTTTGGATTCCCAGATGGAACCCACATAAAAAGCCAG  900

seq1  GCAAAATAATGCATATCTATAACCCCATTTTGTGTGTGTGTGTGTGTGGT  950
      || |||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GC-AAATAATGCATATCTATAACCCCA-TTTGTGTGTGTGTGTGTGTGGT  948

seq1  GGTGGTGG  958
      ||||||||
seq2  GGTGGTGG  956

seq1: chr12_8823992_8824297
seq2: B6Ng01-070F08.g_68_373 (reverse)

seq1  ACATACATACATACATACACACATACATACATACATATACATGAATAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATACATACATACACACATACATACATACATATACATGAATAACT  50

seq1  AAATGAATAAATAAATACAAATGTAAAACAACAAAAAAAGAGAGAGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATAAATAAATACAAATGTAAAACAACAAAAAAAGAGAGAGTTCT  100

seq1  GCCTTATTATGTTACAAAAGTTTTATTACCTTGGGTCATTCTTCCTGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTATTATGTTACAAAAGTTTTATTACCTTGGGTCATTCTTCCTGCTG  150

seq1  CTATATTACTTTCTCCTAGAAAAGAGGTTAATTTCAAGGTGATTTGCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTACTTTCTCCTAGAAAAGAGGTTAATTTCAAGGTGATTTGCCTT  200

seq1  TCCATTGGAGGGGACTCTCTCTCTCTCTCTCTCTCTCTCTGTATGTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGGAGGGGACTCTCTCTCTCTCTCTCTCTCTCTCTGTATGTGTCT  250

seq1  ATGTATGTATGTATGTATGTATGTATGTATGCCCGTGCAAACAATCTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTATGTATGTATGTATGTATGTATGCCCGTGCAAACAATCTGTT  300

seq1  GAATTC  306
      ||||||
seq2  GAATTC  306