BAC Information

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BAC

Clone NameB6Ng01-072K01
Chromosome12 (Build37)
Map Location 96,308,155 - 96,454,929
singlet/doubletdoublet
Overlap geneLOC100039603
Upstream geneLOC217786
Downstream geneLOC667688, Flrt2, 1700019M22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072K01.bB6Ng01-072K01.g
ACCDH889992DH889993
length1,1101,086
definitionDH889992|Mus musculus domesticus DNA, BAC clone: B6Ng01-072K01, 5' end.DH889993|Mus musculus domesticus DNA, BAC clone: B6Ng01-072K01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,453,818 - 96,454,929)(96,308,155 - 96,309,245)
sequence
gaattccaaggtctaacagttcaacagattaacaatgtgggttatttatg
ttgtgggaagctacagaataatttaagggcaacatagtgattattattaa
agaactcggtaaaatatgagctcagaccaagtgtaagatgtggttcatac
ataattccaaataaacaaatgaaacaggtgaaattcatcttcagaatatg
aagcaagcagccaagtatggtgacttataaaaatttccagtgacttggaa
ggcccatctgggagtatgatgaatttctcaaatgcctgaataacacagtg
agaatcttctcaaacaaatgaacaaaagcaaataaaaatccaaccaaaac
aaacaaaaatcaaaagtaaatgtgttcttcaatttcggggaaggattgat
agtgaacttgggagaaaaactttctggaatgatataaattatttatttct
tattgaggatcatattttaacaaaacatacctaggtttcagaaacaacta
ataattcatttcatttcaagcaaatattatctctgattaaaaagatattt
attggtaggcaccttatccattctttatccattttcctgcagtcttcatt
gcatggagctaccttttatttctttcttcttttctctttcatggaattca
tatctgaaggctgaagctttcataaatatcttacactggggttatattga
atatgtgaggaccaaagatcatttaatagggtaaaatattaaataagtgt
attgtggtcgttaggaatttgaaggtaggtattttgaatatattattatt
ggaaatgtcttatttactatatataatatttattagaatgtacttgtctg
gttaacactcgataaggagaatgatagaaaacatcatgatcctgtctttt
tgtatgtgtatcagtctgtactgtctgtggtttcacagtcaggtttagga
agcttacaattagcttctgtctgatggtatttcacgagaaaatcagacac
gtaattcactccaagcctccttgttcccttagtaggagtctttttactgc
ttcatagacaagctcccacccttcctgcagggcatcattcagtaattctt
attttacttg
gaattccattacagcagactataaatgcttaaagcagaataaggtgtaga
caaggtgttgtaagtgttgctattagagagcagatgggtaaaaaaagcac
tttcatgtaatatctgagcacagagctgaaggaagtgaggcagaagccct
gcaaaaggagcagaaagagctaatgccttcgggaagaactagcatcctgc
ttctgagagtttccaagggaagcactgactgtgacaaggacactgaaaag
agagtccaggaactctccttgtgggtgcatcagataggacatgaatggat
tgcatttaataaatagggaagtgaccagtgagcagtgatttaaaaagttc
ctgtgacagcatctgaccttcattttaaagagatggctgtggatcttttg
caactagattataaaattaaaggataaattagagacctgggaggtgcctc
taaaagtatccaaaggaactatgatgatacctcccttgttattttctgtt
gacacacaggataaatgtaaagtatgatcttggataatttcaaaatgaag
attagagatttttttttagagtagggtaagcagttaatatttctgttgcc
aaaaagtttgtaaaacttcttgaatttcatggaactacagcataattctt
aaagcttacaaaataatcaaatgtcttttgataaaaaatatggcaatcat
tttttgctacttagttgtttagaaattaaccatctggaattaactaaata
tccatataataaattaattttctcacactaaatatttttaaattgttatt
tttgttgaataagcttattggcttatatattattggtagtgatagatgta
ctagaaaaatagtgccttaaaatttacataagttttaaaataatgtttaa
atataaaacagtcaacattttcttggaaaaagcaaatgtagtggcaacta
gcaaaatagtaaagcctaagttaaatcctatttgtatttatataaataag
tgacatcagagacatacggtcttaggtgctagtgtttaataactgcatgc
caagtcgaagtttgtattttatggaaatatttaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_96453818_96454929
seq2: B6Ng01-072K01.b_43_1152 (reverse)

seq1  CAAGTAAAATAAGAATTACTTGAATGGATGCCCTGCAGG-AGAGTGGGAG  49
      ||||||||||||||||||| ||||| ||||||||||||| || |||||||
seq2  CAAGTAAAATAAGAATTAC-TGAAT-GATGCCCTGCAGGAAGGGTGGGAG  48

seq1  CTGGTCTATGAAGCAGT-AAAAGACTCCTACTAAGGG-ACAAGGGAGCTT  97
      || |||||||||||||| ||||||||||||||||||| ||||||  ||||
seq2  CTTGTCTATGAAGCAGTAAAAAGACTCCTACTAAGGGAACAAGGAGGCTT  98

seq1  GGAGTGAATTACGTGTCTGATTTTTCTCGTGAAATACCATCAGACAGAAG  147
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GGAGTGAATTACGTGTCTGA-TTTTCTCGTGAAATACCATCAGACAGAAG  147

seq1  CTAATTGTAAGCTTCCTAAACCCTGAACTGTGAAACCACAGACAGTACAG  197
      |||||||||||||||||||| |||| ||||||||||||||||||||||||
seq2  CTAATTGTAAGCTTCCTAAA-CCTG-ACTGTGAAACCACAGACAGTACAG  195

seq1  ACTGATACACATACAAAAAGACAGGATCATGATGTTTTCTATCATTCTCC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATACACATACAAAAAGACAGGATCATGATGTTTTCTATCATTCTCC  245

seq1  TTATCGAGTGTTAACCAGACAAGTACATTCTAATAAATATTATATATAGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCGAGTGTTAACCAGACAAGTACATTCTAATAAATATTATATATAGT  295

seq1  AAATAAGACATTTCCAATAATAATATATTCAAAATACCTACCTTCAAATT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGACATTTCCAATAATAATATATTCAAAATACCTACCTTCAAATT  345

seq1  CCTAACGACCACAATACACTTATTTAATATTTTACCCTATTAAATGATCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACGACCACAATACACTTATTTAATATTTTACCCTATTAAATGATCT  395

seq1  TTGGTCCTCACATATTCAATATAACCCCAGTGTAAGATATTTATGAAAGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCCTCACATATTCAATATAACCCCAGTGTAAGATATTTATGAAAGC  445

seq1  TTCAGCCTTCAGATATGAATTCCATGAAAGAGAAAAGAAGAAAGAAATAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCTTCAGATATGAATTCCATGAAAGAGAAAAGAAGAAAGAAATAA  495

seq1  AAGGTAGCTCCATGCAATGAAGACTGCAGGAAAATGGATAAAGAATGGAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGCTCCATGCAATGAAGACTGCAGGAAAATGGATAAAGAATGGAT  545

seq1  AAGGTGCCTACCAATAAATATCTTTTTAATCAGAGATAATATTTGCTTGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGCCTACCAATAAATATCTTTTTAATCAGAGATAATATTTGCTTGA  595

seq1  AATGAAATGAATTATTAGTTGTTTCTGAAACCTAGGTATGTTTTGTTAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATGAATTATTAGTTGTTTCTGAAACCTAGGTATGTTTTGTTAAA  645

seq1  ATATGATCCTCAATAAGAAATAAATAATTTATATCATTCCAGAAAGTTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATCCTCAATAAGAAATAAATAATTTATATCATTCCAGAAAGTTTT  695

seq1  TCTCCCAAGTTCACTATCAATCCTTCCCCGAAATTGAAGAACACATTTAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCAAGTTCACTATCAATCCTTCCCCGAAATTGAAGAACACATTTAC  745

seq1  TTTTGATTTTTGTTTGTTTTGGTTGGATTTTTATTTGCTTTTGTTCATTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATTTTTGTTTGTTTTGGTTGGATTTTTATTTGCTTTTGTTCATTT  795

seq1  GTTTGAGAAGATTCTCACTGTGTTATTCAGGCATTTGAGAAATTCATCAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGAAGATTCTCACTGTGTTATTCAGGCATTTGAGAAATTCATCAT  845

seq1  ACTCCCAGATGGGCCTTCCAAGTCACTGGAAATTTTTATAAGTCACCATA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCAGATGGGCCTTCCAAGTCACTGGAAATTTTTATAAGTCACCATA  895

seq1  CTTGGCTGCTTGCTTCATATTCTGAAGATGAATTTCACCTGTTTCATTTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTGCTTGCTTCATATTCTGAAGATGAATTTCACCTGTTTCATTTG  945

seq1  TTTATTTGGAATTATGTATGAACCACATCTTACACTTGGTCTGAGCTCAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGGAATTATGTATGAACCACATCTTACACTTGGTCTGAGCTCAT  995

seq1  ATTTTACCGAGTTCTTTAATAATAATCACTATGTTGCCCTTAAATTATTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACCGAGTTCTTTAATAATAATCACTATGTTGCCCTTAAATTATTC  1045

seq1  TGTAGCTTCCCACAACATAAATAACCCACATTGTTAATCTGTTGAACTGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTTCCCACAACATAAATAACCCACATTGTTAATCTGTTGAACTGT  1095

seq1  TAGACCTTGGAATTC  1112
      |||||||||||||||
seq2  TAGACCTTGGAATTC  1110

seq1: chr12_96308155_96309245
seq2: B6Ng01-072K01.g_64_1149

seq1  GAATTCCATTACAGCAGACTATAAATGCTTAAAGCAGAATAAGGTGTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTACAGCAGACTATAAATGCTTAAAGCAGAATAAGGTGTAGA  50

seq1  CAAGGTGTTGTAAGTGTTGCTATTAGAGAGCAGATGGGTAAAAAAAGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTGTTGTAAGTGTTGCTATTAGAGAGCAGATGGGTAAAAAAAGCAC  100

seq1  TTTCATGTAATATCTGAGCACAGAGCTGAAGGAAGTGAGGCAGAAGCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGTAATATCTGAGCACAGAGCTGAAGGAAGTGAGGCAGAAGCCCT  150

seq1  GCAAAAGGAGCAGAAAGAGCTAATGCCTTCGGGAAGAACTAGCATCCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGGAGCAGAAAGAGCTAATGCCTTCGGGAAGAACTAGCATCCTGC  200

seq1  TTCTGAGAGTTTCCAAGGGAAGCACTGACTGTGACAAGGACACTGAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGAGTTTCCAAGGGAAGCACTGACTGTGACAAGGACACTGAAAAG  250

seq1  AGAGTCCAGGAACTCTCCTTGTGGGTGCATCAGATAGGACATGAATGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCAGGAACTCTCCTTGTGGGTGCATCAGATAGGACATGAATGGAT  300

seq1  TGCATTTAATAAATAGGGAAGTGACCAGTGAGCAGTGATTTAAAAAGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTAATAAATAGGGAAGTGACCAGTGAGCAGTGATTTAAAAAGTTC  350

seq1  CTGTGACAGCATCTGACCTTCATTTTAAAGAGATGGCTGTGGATCTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACAGCATCTGACCTTCATTTTAAAGAGATGGCTGTGGATCTTTTG  400

seq1  CAACTAGATTATAAAATTAAAGGATAAATTAGAGACCTGGGAGGTGCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGATTATAAAATTAAAGGATAAATTAGAGACCTGGGAGGTGCCTC  450

seq1  TAAAAGTATCCAAAGGAACTATGATGATACCTCCCTTGTTATTTTCTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTATCCAAAGGAACTATGATGATACCTCCCTTGTTATTTTCTGTT  500

seq1  GACACACAGGATAAATGTAAAGTATGATCTTGGATAATTTCAAAATGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACAGGATAAATGTAAAGTATGATCTTGGATAATTTCAAAATGAAG  550

seq1  ATTAGAGATTTTTTTTTAGAGTAGGGTAAGCAGTTAATATTTCTGTTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGATTTTTTTTTAGAGTAGGGTAAGCAGTTAATATTTCTGTTGCC  600

seq1  AAAAAGTTTGTAAAACTTCTTGAATTTCATGGAACTACAGCATAATTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTTTGTAAAACTTCTTGAATTTCATGGAACTACAGCATAATTCTT  650

seq1  AAAGCTTACAAAATAATCAAATGTCTTTTGATAAAAAATATGGCAATCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTACAAAATAATCAAATGTCTTTTGATAAAAAATATGGCAATCAT  700

seq1  TTTTTGCTACTTAGTTGTTTAGAAATTAACCATCTGGAATTAACTAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCTACTTAGTTGTTTAGAAATTAACCATCTGGAATTAACTAAATA  750

seq1  TCCATATAATAAATTAATTTTCTCACACTAAATATTTTTAAATTGTTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATAATAAATTAATTTTCTCACACTAAATATTTTTAAATTGTTATT  800

seq1  TTTGTTGAATAAGCTTATTGGCTTATATATTATTGGTAGTGATAGATGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGAATAAGCTTATTGGCTTATATATTATTGGTAGTGATAGATGTA  850

seq1  CTAGAAAAATAGTGCCTTAAAATTTACATAAGTTTTAAAATAATGTTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAAATAGTGCCTTAAAATTTACATAAGTTTTAAAATAATGTTTAA  900

seq1  ATATAAAACAGTCAACATTTTCTTGGAAAAAGCAAATGTAGTGGCAACTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAACAGTCAACATTTTCTTGGAAAAAGCAAATGTAGTGGCAACTA  950

seq1  GCAAAATAGTAAAGCCTAAGTTAAATCCTATTTGTATTTATATAAATAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCAAAATAGTAAAGCCTAAGTTAAATCCTATTTGTATTTATATAAAT-AA  999

seq1  GTGACATCCAGAGACATACCGGTCTTAGGTGCTAAGTGTTTAATAACTGC  1050
      ||||||| |||||||||| |||||||||||||| ||||||||||||||||
seq2  GTGACAT-CAGAGACATA-CGGTCTTAGGTGCT-AGTGTTTAATAACTGC  1046

seq1  ATGCCAAAGTCGAAGTTTGTATTTTAATGAAATATTTAATG  1091
      ||||| ||||||||||||||||||||  |||||||||||||
seq2  ATGCC-AAGTCGAAGTTTGTATTTTATGGAAATATTTAATG  1086