BAC Information

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BAC

Clone NameB6Ng01-073F01
Chromosome12 (Build37)
Map Location 66,117,081 - 66,117,759
singlet/doubletsinglet
Overlap geneA430041B07Rik
Upstream geneEG623046, LOC623123, LOC217645, LOC217647, Gm527, Klhl28
Downstream genePrpf39, Fkbp3, Fancm, C79407, Wdr20b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073F01.bB6Ng01-073F01.g
ACCDH890482DH890483
length9311,170
definitionDH890482|Mus musculus domesticus DNA, BAC clone: B6Ng01-073F01, 5' end.DH890483|Mus musculus domesticus DNA, BAC clone: B6Ng01-073F01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacctatgggtagaactcatgtacacacgtgcgtacacatgcac
acatacacacacacacaccgcaatgcctaacaaagttaactcaggtcctt
accttcacaatgttgcctacaacaagctcctgattgttttcagtgtctga
taaaagttgtttaatcccattaatacgatcacgaaagtcttttgcattta
ataatcctgttatgactttaatatactcagcactttctaaggaattacga
ggagctgattttctggggacttctcgaacttcagttacttccctaaaatg
aaaggtatatttcatttttacttccctacaaacccaaattaaaaattctt
attacaagttcaatttttatttctaagaaattctgtagcccacctgcatt
gggaacgccaatggtttactagaaagactcacaaagtcagcatagtttta
ctaatggctgagatttataaacagatagatagcaatcaaaatgtgcagag
ggaaaggcacatggatctaagtctaaagaacaccagacaaaagttttgtt
gttgttctttcatttgtctgattgatttaggttttttttttttgagacag
catcccactacatggttccttgcaggcttggaaactgtagacaagactgg
tctcaaattcacagaaatctactttgcctctgccgtcccagtgatgggat
taaaaatgtgtgccaccatgtctgcctagatgcaagcttttaaggaacct
gtcacagcagccctgcacagagcatcatgtgagatatagtctaacaagaa
gattattaaagataaagactcttccctggattgttatggtgtctgcctag
aatgtgacaaaattacagacaccttgaagtctccgtgaaggaaagcagct
cttctttatgttgtttatatgttcagacaat
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatatagggctccaat
gacgagctagagaagtagccaagaactaaagggatctgcagccctatagg
tgaacacattatgagctaacagtactccggagctctgactctagctgcat
tatatcaaagatggcctagtcggccatcactggaagagaggcccatacga
ctgcaaactttattgctcgatacagggattcaggtctaaaaggggtaatg
tgtgagcagcgggaggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_66117081_66117759
seq2: B6Ng01-073F01.b_39_717 (reverse)

seq1  AGGCAAAGTAGATTTCTGTGAATTTGAGACCAGTCTTGTCTACAGTTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAGTAGATTTCTGTGAATTTGAGACCAGTCTTGTCTACAGTTTCC  50

seq1  AAGCCTGCAAGGAACCATGTAGTGGGATGCTGTCTCAAAAAAAAAAAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGCAAGGAACCATGTAGTGGGATGCTGTCTCAAAAAAAAAAAACC  100

seq1  TAAATCAATCAGACAAATGAAAGAACAACAACAAAACTTTTGTCTGGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAATCAGACAAATGAAAGAACAACAACAAAACTTTTGTCTGGTGT  150

seq1  TCTTTAGACTTAGATCCATGTGCCTTTCCCTCTGCACATTTTGATTGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGACTTAGATCCATGTGCCTTTCCCTCTGCACATTTTGATTGCTA  200

seq1  TCTATCTGTTTATAAATCTCAGCCATTAGTAAAACTATGCTGACTTTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTGTTTATAAATCTCAGCCATTAGTAAAACTATGCTGACTTTGTG  250

seq1  AGTCTTTCTAGTAAACCATTGGCGTTCCCAATGCAGGTGGGCTACAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTCTAGTAAACCATTGGCGTTCCCAATGCAGGTGGGCTACAGAAT  300

seq1  TTCTTAGAAATAAAAATTGAACTTGTAATAAGAATTTTTAATTTGGGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGAAATAAAAATTGAACTTGTAATAAGAATTTTTAATTTGGGTTT  350

seq1  GTAGGGAAGTAAAAATGAAATATACCTTTCATTTTAGGGAAGTAACTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGAAGTAAAAATGAAATATACCTTTCATTTTAGGGAAGTAACTGAA  400

seq1  GTTCGAGAAGTCCCCAGAAAATCAGCTCCTCGTAATTCCTTAGAAAGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGAGAAGTCCCCAGAAAATCAGCTCCTCGTAATTCCTTAGAAAGTGC  450

seq1  TGAGTATATTAAAGTCATAACAGGATTATTAAATGCAAAAGACTTTCGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATATTAAAGTCATAACAGGATTATTAAATGCAAAAGACTTTCGTG  500

seq1  ATCGTATTAATGGGATTAAACAACTTTTATCAGACACTGAAAACAATCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTATTAATGGGATTAAACAACTTTTATCAGACACTGAAAACAATCAG  550

seq1  GAGCTTGTTGTAGGCAACATTGTGAAGGTAAGGACCTGAGTTAACTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGTTGTAGGCAACATTGTGAAGGTAAGGACCTGAGTTAACTTTGT  600

seq1  TAGGCATTGCGGTGTGTGTGTGTGTATGTGTGCATGTGTACGCACGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATTGCGGTGTGTGTGTGTGTATGTGTGCATGTGTACGCACGTGTG  650

seq1  TACATGAGTTCTACCCATAGGTGGAATTC  679
      |||||||||||||||||||||||||||||
seq2  TACATGAGTTCTACCCATAGGTGGAATTC  679