BAC Information

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BAC

Clone NameB6Ng01-073O12
Chromosome12 (Build37)
Map Location 113,494,090 - 113,675,976
singlet/doubletdoublet
Overlap geneA730018C14Rik
Upstream geneTraf3, Amn, Cdc42bpb, A230065H16Rik, 1200009I06Rik, Tnfaip2, Gm266, Eif5, Mark3, Ckb, 6720458F09Rik, Bag5, 2810002N01Rik, Klc1, Xrcc3, Zfyve21, Ppp1r13b, LOC100041886, 2010107E04Rik, BC048943, Tdrd9, A530050D06Rik, Kif26a
Downstream geneA530016L24Rik, Tmem179, 2610204M08Rik, Adssl1, Siva1, Akt1, EG382639, AW555464, LOC382640, Pld4, AI450948, LOC100041194, BC022687, Cdca4, Gpr132, Jag2, Nudt14, Brf1, Btbd6, Pacs2, Tex22, Mta1, Crip2, Crip1, 4930427A07Rik, LOC676349, Tmem121, Igh, Igh-2, Gm900, Igh-1b, Igh-3, Ighg1, AI324046, LOC668370, LOC668375, EG382645, Igh-5, Igh-6, Ighj4, Ighj3, Ighj2, Ighj1, Ighd4-1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073O12.bB6Ng01-073O12.g
ACCDH890898DH890899
length2101,069
definitionDH890898|Mus musculus domesticus DNA, BAC clone: B6Ng01-073O12, 5' end.DH890899|Mus musculus domesticus DNA, BAC clone: B6Ng01-073O12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,675,767 - 113,675,976)(113,494,090 - 113,495,165)
sequence
gaattccctggaataatccaaactctaatccgttgccttcaacaggggct
ggtcctaacccctgacttatgtcccctgagaaatttctgccagctgcaca
gggtcttccttctcccgaaccttggagtttttagagaaatccaactgtct
tctgtctttctcttaggcctgttcgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgt
gaattctcacacctgcagtgaagagcttggtacccaccatctgccccgtc
tgtccagctaactccaaattccagcccgtgtgggtggtggtgtccacagg
atattgtcattgacattgatgggctcttctcttgttcagggagacatagg
gcatctccttttctgtatcatggggaggctggctcccacacttgtactgg
gatgagacactctggtccctgccagccctgctttctggaatccagtctct
tcaatcatggttcatgggtctaagcttttttatagattaatatctattct
tgctgtaaagctctgaaatcatgaccaatgtaccatgttgcacattacag
tttgggtctggactattctcaaggcccgtgtgaaggagagttggctccta
gcctggtctccatccagagatggtggaagcatgggagatgcgtcctagag
atgcttaggtcactacgtattgaccgggcatgtaacaggtttcttcatct
gtcctttgtcgtttctggcaaccaggcagaaagtctaatttaggttgaaa
gctgtgagtctgattgagggtagattgaaacccccaaacaatccttctgt
cttcataagtgtgtattctcaagaaaaagctggctaacactccgtgtgtc
cccaagaactgtatcacacagcattgtcctgtcttttgtcccagtgtctc
ccctgtttcccagtcatcactacctcactctgacttctggcaaatggttc
ttgttgtttttgtttgtttcttgttctaaagtgtctccagagtttggctt
tttgcagagcactgtattgtgggaactctacagtccaagacttgcatact
ggcttctcttcctttgtatgctcattgaaggttcagaccttagacttgat
atctccagtcctcttttccctgaatggtgctgcatgcacaaatggaggta
ctgggaattgctattccagtgacccatggagatatcttgggttgcttccg
gttttagcaccacgactgatctaagccgcttatcatttaaggtgggattt
gtatggacgtatagttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_113675767_113675976
seq2: B6Ng01-073O12.b_44_253 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACGAACAGGCCTAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACGAACAGGCCTAAGA  50

seq1  GAAAGACAGAAGACAGTTGGATTTCTCTAAAAACTCCAAGGTTCGGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACAGAAGACAGTTGGATTTCTCTAAAAACTCCAAGGTTCGGGAGA  100

seq1  AGGAAGACCCTGTGCAGCTGGCAGAAATTTCTCAGGGGACATAAGTCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGACCCTGTGCAGCTGGCAGAAATTTCTCAGGGGACATAAGTCAGG  150

seq1  GGTTAGGACCAGCCCCTGTTGAAGGCAACGGATTAGAGTTTGGATTATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGGACCAGCCCCTGTTGAAGGCAACGGATTAGAGTTTGGATTATTC  200

seq1  CAGGGAATTC  210
      ||||||||||
seq2  CAGGGAATTC  210

seq1: chr12_113494090_113495165
seq2: B6Ng01-073O12.g_71_1139

seq1  GAATTCTCACACCAGCAGTGAAGAGCTTGGTACCCACCATCTGCCCCGTC  50
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACACCTGCAGTGAAGAGCTTGGTACCCACCATCTGCCCCGTC  50

seq1  TGTCCAGCTAACTCCAAATTCCAGCCCGTGTGGGTGGTGGTGTCCACAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGCTAACTCCAAATTCCAGCCCGTGTGGGTGGTGGTGTCCACAGG  100

seq1  ATATTGTCATTGACATTGATGGGCTCTTCTCTTGTTCAGGGAGACATAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTCATTGACATTGATGGGCTCTTCTCTTGTTCAGGGAGACATAGG  150

seq1  GCATCTCCTTTTCTGTATCATGGGGAGGCTGGCTCCCACACTTGTACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCCTTTTCTGTATCATGGGGAGGCTGGCTCCCACACTTGTACTGG  200

seq1  GATGAGACACTCTGGTCCCTGCCAGCCCTGCTTTCTGGAATCCAGTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGACACTCTGGTCCCTGCCAGCCCTGCTTTCTGGAATCCAGTCTCT  250

seq1  TCAATCATGGTTCATGGGTCTAAGCTTTTTTATAGATTAATATCTATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCATGGTTCATGGGTCTAAGCTTTTTTATAGATTAATATCTATTCT  300

seq1  TGCTGTAAAGCTCTGAAATCATGACCAATGTACCATGTTGCACATTACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTAAAGCTCTGAAATCATGACCAATGTACCATGTTGCACATTACAG  350

seq1  TTTGGGTCTGGACTATTCTCAAGGCCCGTGTGAAGGAGAGTTGGCTCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTCTGGACTATTCTCAAGGCCCGTGTGAAGGAGAGTTGGCTCCTA  400

seq1  GCCTGGTCTCCATCCAGAGATGGTGGAAGCATGGGAGATGCGTCCTAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCTCCATCCAGAGATGGTGGAAGCATGGGAGATGCGTCCTAGAG  450

seq1  ATGCTTAGGTCACTACGTATTGACCGGGCATGTAACAGGTTTCTTCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAGGTCACTACGTATTGACCGGGCATGTAACAGGTTTCTTCATCT  500

seq1  GTCCTTTGTCGTTTCTGGCAACCAGGCAGAAAGTCTAATTTAGGTTGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTGTCGTTTCTGGCAACCAGGCAGAAAGTCTAATTTAGGTTGAAA  550

seq1  GCTGTGAGTCTGATTGAGGGTAGATTGAAACCCCCAAACAATCCTTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGAGTCTGATTGAGGGTAGATTGAAACCCCCAAACAATCCTTCTGT  600

seq1  CTTCATAAGTGTGTATTCTCAAGAAAAAGCTGGCTAACACTCCGTGTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAAGTGTGTATTCTCAAGAAAAAGCTGGCTAACACTCCGTGTGTC  650

seq1  CCCAAGAACTGTATCACACAGCATTGTCCTGTCTTTTGTCCCAGTGTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGAACTGTATCACACAGCATTGTCCTGTCTTTTGTCCCAGTGTCTC  700

seq1  CCCTGTTTCCCAGTCATCACTACCTCACTCTGACTTCTGGCAAATGGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTTCCCAGTCATCACTACCTCACTCTGACTTCTGGCAAATGGTTC  750

seq1  TTGTTGTTTTTGTTTGTTTCTTGTTCTAAAGTGTCTCCAGAGTTTGGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTTTTGTTTGTTTCTTGTTCTAAAGTGTCTCCAGAGTTTGGCTT  800

seq1  TTTGCAGAGCACTGTATTGTGGGAACTCCACAGTCCAAGACTTGCATACT  850
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTGCAGAGCACTGTATTGTGGGAACTCTACAGTCCAAGACTTGCATACT  850

seq1  GGCTTCTCTTCCTTTGTAATGCTCATTGAAGGTTCAGACCTTAGACTTGA  900
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGCTTCTCTTCCTTTGT-ATGCTCATTGAAGGTTCAGACCTTAGACTTGA  899

seq1  TATCTCCAGTCCTCTTTTCCCTGAATGGTGCTGCAGTGCACAAATGGAGG  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATCTCCAGTCCTCTTTTCCCTGAATGGTGCTGCA-TGCACAAATGGAGG  948

seq1  TACTGGGAATTGCTTATCCAGTGACCCATGGAAGGATATCTT-GGTTGCT  999
      ||||||||||||||  ||||||||||||||||  |||||||| |||||||
seq2  TACTGGGAATTGCTATTCCAGTGACCCATGGA--GATATCTTGGGTTGCT  996

seq1  TCCGGTTTTTAGCAACCACGAACGAACGAAGCCGCTATAAACATTTTAGG  1049
      ||||| ||||||| |||||||  || | |||||||  | | ||||| |||
seq2  TCCGG-TTTTAGC-ACCACGACTGATCTAAGCCGC--TTATCATTTAAGG  1042

seq1  TGGGATTTTGTATGGACGTA-AGTTTTC  1076
      ||||| |||||||||||||| |||||||
seq2  TGGGA-TTTGTATGGACGTATAGTTTTC  1069