BAC Information

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BAC

Clone NameB6Ng01-073P12
Chromosome12 (Build37)
Map Location 113,254,749 - 113,394,115
singlet/doubletdoublet
Overlap geneTdrd9, A530050D06Rik, Kif26a
Upstream geneRcor1, 4930595D18Rik, Traf3, Amn, Cdc42bpb, A230065H16Rik, 1200009I06Rik, Tnfaip2, Gm266, Eif5, Mark3, Ckb, 6720458F09Rik, Bag5, 2810002N01Rik, Klc1, Xrcc3, Zfyve21, Ppp1r13b, LOC100041886, 2010107E04Rik, BC048943
Downstream geneA730018C14Rik, A530016L24Rik, Tmem179, 2610204M08Rik, Adssl1, Siva1, Akt1, EG382639, AW555464, LOC382640, Pld4, AI450948, LOC100041194, BC022687, Cdca4, Gpr132, Jag2, Nudt14, Brf1, Btbd6, Pacs2, Tex22, Mta1, Crip2, Crip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073P12.bB6Ng01-073P12.g
ACCDH890945DH890946
length964651
definitionDH890945|Mus musculus domesticus DNA, BAC clone: B6Ng01-073P12, 5' end.DH890946|Mus musculus domesticus DNA, BAC clone: B6Ng01-073P12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,393,153 - 113,394,115)(113,254,749 - 113,255,399)
sequence
gaattcaccaggctcaagcatacaagggggagccctgcagggcatgagag
gtccccagagatggcacagggctggagactggggtggggtgatcccagcc
aatgacccaggcccaggcggagggtaggctggcctgtttccagtctgact
cttctgctctgattttccactcagcaggaggctacaaagggaaggaagtg
tgtccgggtgcagccattagctcggcttgaaaggggccgcccagcgcagg
ctccagccccgaatccaggcccagctaccctttgttctgggccctctgaa
cagacctggaggcctctgcctgtcttaggggccacagcctctgaaataag
ccccctccccacagcaggaggcaagaatgaaagctaagcctaaggaagga
gagtccaccaggcccaacaacacagctaggcagagagcaggcgagaagcc
tgaccggccatcaagagcagaagtccattcaggcaccggacgggaagcaa
gcgggagagggagtggactcccatattcaggtccccactgagaaggtggc
caaaagtcatttgctcatctgtgctgttggctccggctccgggtatctca
ggcaagaggccttcctcctcccaacagctgccctgcaccccatccctgct
gcatcagctcccagtgggccaggacccaggtaggagcaagcctagaagta
gccaagtcaacgtttttgatccctcaccaccaccaccaccaccacccacc
cacccacgttgggggttggcagggctaaaccttaggccacttttccagtc
ctggtcacacagggtgaccaggctactcaacacattacggtgcagttggg
ctggggtgtggggattgtgacccacagcacttgaggcctacagagagcag
agcaactggtgggggttgggttcttcaaattcagcccaagcccttgtctc
tggagcagctggga
gaattcctttgggaattactgcctcaaaatcaaaaacatatgtgcataag
ccaagtaactgttatgttcctgcctcggtgcacactggctttcagggtgt
tctgtcctccttagccctcataaggggtatgaggtgagcatgtggtagtc
tgagactcagggaagcagcaacagcagcggcacaaggttctcctcaggtg
ggctgaggtctgaccaggcatcaggcttcaggcctcctgatggctgtact
ctctctcctctgctgaagtttcttgtcagagaggaccaggaaatgatgaa
ggcgccattgtagcctggctgtcaggagcctgactgtcagtgtgaaaggt
ggccacttttgcaactccacagcgcatgagccgctcccccatccttggta
gtagtgaaagatccccaaagggagaccctcactcaagcctcgggatgtgg
cgtggacccaagagagacgcggagaccgaaatggcgtacacacaaagcta
tttaataaagcggggggggggggggagccagcacgctggggccaagactc
atacacctctgcatagggtagaggagtctcgaccaaaactctaatttttc
acaagcttttaaaggcaaaaaccacaaactgggagggggaatggggaggg
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_113393153_113394115
seq2: B6Ng01-073P12.b_45_1008 (reverse)

seq1  TCCCAGCTGCTCCCGGAGACAAGGGCTTGGGCTGATTGTGAAGGACCCAG  50
      ||||||||||| || |||||||||||||||||||| | ||||| ||||| 
seq2  TCCCAGCTGCT-CCAGAGACAAGGGCTTGGGCTGAATTTGAAGAACCCAA  49

seq1  CCCC--ACAGTGGCTCTGCTCTCTGTGGGCCTC-AGTGCTGTGGGTCACA  97
      ||||   |||| |||||||||||||| |||||| ||||||||||||||||
seq2  CCCCCACCAGTTGCTCTGCTCTCTGTAGGCCTCAAGTGCTGTGGGTCACA  99

seq1  ATCCCCACACCCCAGCCCAACTGCACCGTAATGTGTTGAGTAGCCTGGTC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCACACCCCAGCCCAACTGCACCGTAATGTGTTGAGTAGCCTGGTC  149

seq1  ACCCTGTGTGACCAGGACTGGAAAAGTGGCCTAAGGTTTTAGCCCTGCCA  197
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACCCTGTGTGACCAGGACTGGAAAAGTGGCCTAAGG-TTTAGCCCTGCCA  198

seq1  ACCCCCAACGTGGGTGGGTGGGTGGTGGTGGTGGTGGTGGTGAGGGATCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAACGTGGGTGGGTGGGTGGTGGTGGTGGTGGTGGTGAGGGATCA  248

seq1  AAAACGTTGACTTGGCTACTTCTAGGCTTGCTCCTACCTGGGTCCTGGCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACGTTGACTTGGCTACTTCTAGGCTTGCTCCTACCTGGGTCCTGGCC  298

seq1  CACTGGGAGCTGATGCAGCAGGGATGGGGTGCAGGGCAGCTGTTGGGAGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGAGCTGATGCAGCAGGGATGGGGTGCAGGGCAGCTGTTGGGAGG  348

seq1  AGGAAGGCCTCTTGCCTGAGATACCCGGAGCCGGAGCCAACAGCACAGAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGCCTCTTGCCTGAGATACCCGGAGCCGGAGCCAACAGCACAGAT  398

seq1  GAGCAAATGACTTTTGGCCACCTTCTCAGTGGGGACCTGAATATGGGAGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAATGACTTTTGGCCACCTTCTCAGTGGGGACCTGAATATGGGAGT  448

seq1  CCACTCCCTCTCCCGCTTGCTTCCCGTCCGGTGCCTGAATGGACTTCTGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCTCTCCCGCTTGCTTCCCGTCCGGTGCCTGAATGGACTTCTGC  498

seq1  TCTTGATGGCCGGTCAGGCTTCTCGCCTGCTCTCTGCCTAGCTGTGTTGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATGGCCGGTCAGGCTTCTCGCCTGCTCTCTGCCTAGCTGTGTTGT  548

seq1  TGGGCCTGGTGGACTCTCCTTCCTTAGGCTTAGCTTTCATTCTTGCCTCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTGGTGGACTCTCCTTCCTTAGGCTTAGCTTTCATTCTTGCCTCC  598

seq1  TGCTGTGGGGAGGGGGCTTATTTCAGAGGCTGTGGCCCCTAAGACAGGCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGGGGAGGGGGCTTATTTCAGAGGCTGTGGCCCCTAAGACAGGCA  648

seq1  GAGGCCTCCAGGTCTGTTCAGAGGGCCCAGAACAAAGGGTAGCTGGGCCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCTCCAGGTCTGTTCAGAGGGCCCAGAACAAAGGGTAGCTGGGCCT  698

seq1  GGATTCGGGGCTGGAGCCTGCGCTGGGCGGCCCCTTTCAAGCCGAGCTAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCGGGGCTGGAGCCTGCGCTGGGCGGCCCCTTTCAAGCCGAGCTAA  748

seq1  TGGCTGCACCCGGACACACTTCCTTCCCTTTGTAGCCTCCTGCTGAGTGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCACCCGGACACACTTCCTTCCCTTTGTAGCCTCCTGCTGAGTGG  798

seq1  AAAATCAGAGCAGAAGAGTCAGACTGGAAACAGGCCAGCCTACCCTCCGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAGAGCAGAAGAGTCAGACTGGAAACAGGCCAGCCTACCCTCCGC  848

seq1  CTGGGCCTGGGTCATTGGCTGGGATCACCCCACCCCAGTCTCCAGCCCTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCTGGGTCATTGGCTGGGATCACCCCACCCCAGTCTCCAGCCCTG  898

seq1  TGCCATCTCTGGGGACCTCTCATGCCCTGCAGGGCTCCCCCTTGTATGCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCTCTGGGGACCTCTCATGCCCTGCAGGGCTCCCCCTTGTATGCT  948

seq1  TGAGCCTGGTGAATTC  963
      ||||||||||||||||
seq2  TGAGCCTGGTGAATTC  964

seq1: chr12_113254749_113255399
seq2: B6Ng01-073P12.g_70_720

seq1  GAATTCCTTTGGGAATTACTGCCTCAAAATCAAAAACATATGTGCATAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGGGAATTACTGCCTCAAAATCAAAAACATATGTGCATAAG  50

seq1  CCAAGTAACTGTTATGTTCCTGCCTCGGTGCACACTGGCTTTCAGGGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTAACTGTTATGTTCCTGCCTCGGTGCACACTGGCTTTCAGGGTGT  100

seq1  TCTGTCCTCCTTAGCCCTCATAAGGGGTATGAGGTGAGCATGTGGTAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTCCTTAGCCCTCATAAGGGGTATGAGGTGAGCATGTGGTAGTC  150

seq1  TGAGACTCAGGGAAGCAGCAACAGCAGCGGCACAAGGTTCTCCTCAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTCAGGGAAGCAGCAACAGCAGCGGCACAAGGTTCTCCTCAGGTG  200

seq1  GGCTGAGGTCTGACCAGGCATCAGGCTTCAGGCCTCCTGATGGCTGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGGTCTGACCAGGCATCAGGCTTCAGGCCTCCTGATGGCTGTACT  250

seq1  CTCTCTCCTCTGCTGAAGTTTCTTGTCAGAGAGGACCAGGAAATGATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCCTCTGCTGAAGTTTCTTGTCAGAGAGGACCAGGAAATGATGAA  300

seq1  GGCGCCATTGTAGCCTGGCTGTCAGGAGCCTGACTGTCAGTGTGAAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCCATTGTAGCCTGGCTGTCAGGAGCCTGACTGTCAGTGTGAAAGGT  350

seq1  GGCCACTTTTGCAACTCCACAGCGCATGAGCCGCTCCCCCATCCTTGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACTTTTGCAACTCCACAGCGCATGAGCCGCTCCCCCATCCTTGGTA  400

seq1  GTAGTGAAAGATCCCCAAAGGGAGACCCTCACTCAAGCCTCGGGATGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGAAAGATCCCCAAAGGGAGACCCTCACTCAAGCCTCGGGATGTGG  450

seq1  CGTGGACCCAAGAGAGACGCGGAGACCGAAATGGCGTACACACAAAGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGACCCAAGAGAGACGCGGAGACCGAAATGGCGTACACACAAAGCTA  500

seq1  TTTAATAAAGCGGGGGGGGGGGGGGAGCCAGCACGCTGGGGCCAAGACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAAAGCGGGGGGGGGGGGGGAGCCAGCACGCTGGGGCCAAGACTC  550

seq1  ATACACCTCTGCATAGGGTAGAGGAGTCTCGACCAAGACTCAAATTTTTC  600
      |||||||||||||||||||||||||||||||||||| |||| ||||||||
seq2  ATACACCTCTGCATAGGGTAGAGGAGTCTCGACCAAAACTCTAATTTTTC  600

seq1  ACAAGCTTTTAAAGGCAAAAACCACAAACTGGGAGGGGGAATGGGGAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTTTTAAAGGCAAAAACCACAAACTGGGAGGGGGAATGGGGAGGG  650

seq1  A  651
      |
seq2  A  651