BAC Information

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BAC

Clone NameB6Ng01-074B13
Chromosome12 (Build37)
Map Location 47,296,976 - 47,298,035
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC664952, Nova1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074B13.bB6Ng01-074B13.g
ACCDH891038DH891039
length1,1651,049
definitionDH891038|Mus musculus domesticus DNA, BAC clone: B6Ng01-074B13, 5' end.DH891039|Mus musculus domesticus DNA, BAC clone: B6Ng01-074B13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccagaggatccagcaatacctctcctcagc
atatgccaacttgtaataaggacacatgctccactatgttcatagcagcc
ttatttataatagccagaagctggaaagaacctagatgcccctcaacaga
ggaatggatacagaaaatgtggtacatctacacaatggagtactactcag
ctattaaaatgaatgaatttatgaagttcctagccaaatggatggacctg
gagggcatcatcctgagtgaggtaacacattcacaaagaaactcacacaa
tatgtattcactgataagtggatattagccccaaacctaggatacccaag
atataagatataatttgttaaacacatgaaactcaagaagaatgaagact
gaagtgtggacactatgcccctccttagatttggaaacaaaacacccatg
gaaggagttacagagccaaagtttggagctgagatgaaaggatggaccat
gtagagactgccatatccagggatccaccccataatcagcatccaaacac
tgacaccattgcatacactagtaagattttattgaaaggacccagatgta
gctgtctcttgtgagactatgccggggcctagcaaacacagaagtggatg
ctcacagtcagctaatggatggatcatagggctcccaatggaggagctag
agaaagtagccaagagctaaagggatctgcaaccctatagtggaacaaca
ttatgactaaccagtaccccggagcttcttgactctagctgcatatatat
caaagatggctagtcggcatcactggaagagaggccattggacttgcaac
tttatatgcccagtacagggaacactaggccaaaaaaggggattggtggc
cagggggagatgtgg
gaattctttgaagagacaaatttttcctcctattattcagagttaaggca
aaaccagatagttattatcatgatatttacaaatacatatgtgtatactt
atgtgtgtatatgtgtatatgcacacatatatgtatagatatgtatatgt
atataccaatattatatatatatatatatatatatatatatgtatatata
ttctgcctggcctgtaagctccaactagtgtttgattccctagtactgga
atttgagcacctccactatattaggcttttctacctgctgaggattgaac
tcttgttcagcaaatactttactgactgaactataaccccagctgaagtt
taaagaattttcagtctttaaagtctgaggttctgatctctggatctcct
tggatagattatagactacactggtatttattgattcaatgaagccatct
cagggatagcaaaaatcaggagattctgggaccagggcagatctgtgtat
tggcctcttggcatattctttcttgtatatttctgttctctaagaatttc
tagattccagatggatgttgaaggcttacatgaagtaatttctcacatct
tcagataaaccttattaatatccacatttttaggtaagtcctactggcct
tcacatgttcaggtctagaatttcagccttacagactctttctaccagag
atctagagaaatccccagccttatattgcattggtcactgtaataaaagt
tggtatttaacagaaaccaggtctctcatgttctgagggttgggagtctc
tgggaaagaggccaatagtatctatttcaagggacgttttctgtcctaag
gttgcaaacttcaactgccttcttactgtgtccttaaatgactctgcaat
atgatatgttaggggtggaggaaagacagaaaataacaaagaaagaaatg
gaaggaaagggaggtaaattatttctggtatctatgatagtttgatgtga
tggcactagccataagcttccatattggatagtttattacacttgtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_47296976_47298035
seq2: B6Ng01-074B13.g_68_1116 (reverse)

seq1  TCCACCAAGTGGTAATAAAACATACAAATATGTGAGCTTATGGCTAGTGC  50
      |||| ||||| ||||||||  || | ||||||  ||||||||||||||||
seq2  TCCA-CAAGT-GTAATAAACTAT-CCAATATGGAAGCTTATGGCTAGTGC  47

seq1  CATTCACATTCAAACTATACATAGGAATACCAGAAATAATTTAACCTCCC  100
      || ||||| ||||||||| |||||  |||||||||||||||| |||||||
seq2  CA-TCACA-TCAAACTAT-CATAG--ATACCAGAAATAATTT-ACCTCCC  91

seq1  TTTCCTTCCATTTTCTTTCTTTGTTTATTTTTCTGTCTTTCCTCCACCCC  150
      |||||||||| ||||||||||||||   ||||||||||||||||||||||
seq2  TTTCCTTCCA-TTTCTTTCTTTGTT--ATTTTCTGTCTTTCCTCCACCCC  138

seq1  TAACATATCCTATTGCAGAGTCATTTAAGGACACAGTAAGAAGGCAGTTG  200
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAACATATCATATTGCAGAGTCATTTAAGGACACAGTAAGAAGGCAGTTG  188

seq1  AAGTTTGCAACCTTAGGACAG-AAACGTCCCTTGAAATAGATACTATTGG  249
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAGTTTGCAACCTTAGGACAGAAAACGTCCCTTGAAATAGATACTATTGG  238

seq1  CCTCTTTCCCAGAGACTCCCAACCCTCAGAACATGAGAGACCTGGTTTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTCCCAGAGACTCCCAACCCTCAGAACATGAGAGACCTGGTTTCT  288

seq1  GTTAAATACCAACTTTTATTACAGTGACCAATGCAATATAAGGCTGGGGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATACCAACTTTTATTACAGTGACCAATGCAATATAAGGCTGGGGA  338

seq1  TTTCTCTAGATCTCTGGTAGAAAGAGTCTGTAAGGCTGAAATTCTAGACC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTAGATCTCTGGTAGAAAGAGTCTGTAAGGCTGAAATTCTAGACC  388

seq1  TGAACATGTGAAGGCCAGTAGGACTTACCTAAAAATGTGGATATTAATAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATGTGAAGGCCAGTAGGACTTACCTAAAAATGTGGATATTAATAA  438

seq1  GGTTTATCTGAAGATGTGAGAAATTACTTCATGTAAGCCTTCAACATCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATCTGAAGATGTGAGAAATTACTTCATGTAAGCCTTCAACATCCA  488

seq1  TCTGGAATCTAGAAATTCTTAGAGAACAGAAATATACAAGAAAGAATATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATCTAGAAATTCTTAGAGAACAGAAATATACAAGAAAGAATATG  538

seq1  CCAAGAGGCCAATACACAGATCTGCCCTGGTCCCAGAATCTCCTGATTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGGCCAATACACAGATCTGCCCTGGTCCCAGAATCTCCTGATTTT  588

seq1  TGCTATCCCTGAGATGGCTTCATTGAATCAATAAATACCAGTGTAGTCTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCCCTGAGATGGCTTCATTGAATCAATAAATACCAGTGTAGTCTA  638

seq1  TAATCTATCCAAGGAGATCCAGAGATCAGAACCTCAGACTTTAAAGACTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTATCCAAGGAGATCCAGAGATCAGAACCTCAGACTTTAAAGACTG  688

seq1  AAAATTCTTTAAACTTCAGCTGGGGTTATAGTTCAGTCAGTAAAGTATTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTTTAAACTTCAGCTGGGGTTATAGTTCAGTCAGTAAAGTATTT  738

seq1  GCTGAACAAGAGTTCAATCCTCAGCAGGTAGAAAAGCCTAATATAGTGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAACAAGAGTTCAATCCTCAGCAGGTAGAAAAGCCTAATATAGTGGA  788

seq1  GGTGCTCAAATTCCAGTACTAGGGAATCAAACACTAGTTGGAGCTTACAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTCAAATTCCAGTACTAGGGAATCAAACACTAGTTGGAGCTTACAG  838

seq1  GCCAGGCAGAATATATATACATATATATATATATATATATATATATATAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCAGAATATATATACATATATATATATATATATATATATATATAA  888

seq1  TATTGGTATATACATATACATATCTATACATATATGTGTGCATATACACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTATATACATATACATATCTATACATATATGTGTGCATATACACA  938

seq1  TATACACACATAAGTATACACATATGTATTTGTAAATATCATGATAATAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACACATAAGTATACACATATGTATTTGTAAATATCATGATAATAA  988

seq1  CTATCTGGTTTTGCCTTAACTCTGAATAATAGGAGGAAAAATTTGTCTCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGGTTTTGCCTTAACTCTGAATAATAGGAGGAAAAATTTGTCTCT  1038

seq1  TCAAAGAATTC  1060
      |||||||||||
seq2  TCAAAGAATTC  1049