BAC Information

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BAC

Clone NameB6Ng01-074D02
Chromosome12 (Build37)
Map Location 107,613,924 - 107,823,435
singlet/doubletdoublet
Overlap gene1700121N20Rik, LOC100041191, LOC100040451
Upstream gene2810011L19Rik, LOC100040339, EG668081, D430019H16Rik, Bdkrb2, Bdkrb1, 2410024A21Rik, 4933433P14Rik, Ak7, Papola, Vrk1, LOC100040386, LOC100040404, LOC100040420
Downstream geneLOC673604, LOC100040484, LOC382635, LOC100041251, LOC100040497
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074D02.bB6Ng01-074D02.g
ACCDH891112DH891113
length1,2361,045
definitionDH891112|Mus musculus domesticus DNA, BAC clone: B6Ng01-074D02, 5' end.DH891113|Mus musculus domesticus DNA, BAC clone: B6Ng01-074D02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,613,924 - 107,615,162)(107,822,390 - 107,823,435)
sequence
gaattctcctgaagacatttagagagacctgtcggacccaagcacactcc
tccaggctcattgggatataaccgagatccttaagaacggcgttgctcaa
tctcataaacaaaaatattttaattaactaatctgtttatgggtcggttc
ccattcctgcactttccgtttttattaaggtgaggcacgtcttctgggtg
actttctcacctcggaggcgaggaaccacaaggtctgtcctggccctgtc
attcacagacatccgcggatgacacgtctccacaacacactttgcacagc
gctgtttgtgggcagagcctccccccatagatactcctgtaattctatta
atgtggtcccatcaccatatggcgcaatgatgccaattacattgttgcaa
ccagcagatttctcagaatggaggccatcttcccagccaggacacaccct
cgttaccacgatccctctccccaagaacgggctgtctgtcaatgctgtcc
actagatttttttgactcccgattatttaatcaggatattcttggtggtt
ctaagaaggtgaagcgctacaagaggctggaatatttttcttttcatccc
cccccttttacaatatatgataaatacagcttttggcctgcacactgaag
gccactaggcttggatggtcttttgcttgtttgttagggttactgtgatg
tgtggcgcactcggcagctacccagacaaaacagctccagaaacaacagc
agcaaaagccactcgaagcaccccaagccacgcgggcttccttttgagct
cccaaatccaaggacttggagccggttctaaaacttctgacagtggccta
aaaacatgaaacaagggctgcatccccccctaggactctatgtaaaatac
accccaccctgtagaattacctccactccacgtgtcaaaatacagctgta
gctgtatagtacaatgctcataaatccgaaaatgtttaaaatgcccattg
tattttcaaagctctggaagagtcattttctagattagcaccctctcttc
ccaaccctgtgctaagcctgctcttttttttttcctttcctgattccaaa
tttcacataattattaagtgactttatcctcaggcctaaccttggccaat
tcagcagtcactggcggatagtgaactgcatgttctatgaatttgtaatt
gagaaatctcgtgctatagacactgttaacccagct
gaattctctgtctcagtttcaccaccagacatctagcaagaccctcacat
cttcctggtcttacgctcctctgacttcagggagctctagagaggtcttc
ttgtcctctcatcttagactttcaccacccaataccggccaactaccctt
gtgatggttgaccactggtttgcagagtcctgccctcaccctgctggaag
ggaacggaacggtggacacagcaaggagacatctcattcctgcccctgaa
gctgactggcagctgggtctctccagcaggtagtaaaccgtctccctaga
actgacatctggaagtagggtagataaatggctttctctggggtacctat
ttatctgattgaagcaaagcagggttggctacaggatttggctctgtgtt
gtgagatagcggcggcctttgatgggaagtaaaagccacatcaattggct
cttttgactgcatctgaatacttaggcttaatattcataccttaaagttt
gtagactggacagagcatcgccgcaggcttcagaagagttttctttttaa
tataaaatgaagactattttatttcctagtgaacaggtgagcgtgtgatg
tggtatgcacacactggtaagaaggagtcatggagagcacacatctagaa
ttttccagaagccataaagttttggctcagttcctaatgtagaggacaga
ggcatggatcaggaagcaaggaagggcccaatgaaatctttagactcttt
agaatcagaaggaagagaagttgtatggtggccaaatgatattaaacatc
taatatcctgtctgagtgctaaagtagactgagcaggatcccagattttc
atggctccatccccagaaactcaggagtttgtggctcagagaaggctttg
gatggcatactgagtgtctctgaaaccccatcctgtctcccctcacctgg
ctatggagggcgaagctgaagagcagctggtccctgcatgcctgtgctga
agatggaaatcccaggagcccacccggaaattctttctgtcactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_107613924_107615162
seq2: B6Ng01-074D02.b_47_1282

seq1  GAATTCTCCTGAAGACATTTAGAGAGACCTGTCGGACCCAAGCACACTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGAAGACATTTAGAGAGACCTGTCGGACCCAAGCACACTCC  50

seq1  TCCAGGCTCATTGGGATATAACCGAGATCCTTAAGAACGGCGTTGCTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCTCATTGGGATATAACCGAGATCCTTAAGAACGGCGTTGCTCAA  100

seq1  TCTCATAAACAAAAATATTTTAATTAACTAATCTGTTTATGGGTCGGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATAAACAAAAATATTTTAATTAACTAATCTGTTTATGGGTCGGTTC  150

seq1  CCATTCCTGCACTTTCCGTTTTTATTAAGGTGAGGCACGTCTTCTGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCTGCACTTTCCGTTTTTATTAAGGTGAGGCACGTCTTCTGGGTG  200

seq1  ACTTTCTCACCTCGGAGGCGAGGAACCACAAGGTCTGTCCTGGCCCTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTCACCTCGGAGGCGAGGAACCACAAGGTCTGTCCTGGCCCTGTC  250

seq1  ATTCACAGACATCCGCGGATGACACGTCTCCACAACACACTTTGCACAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAGACATCCGCGGATGACACGTCTCCACAACACACTTTGCACAGC  300

seq1  GCTGTTTGTGGGCAGAGCCTCCCCCCATAGATACTCCTGTAATTCTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTGTGGGCAGAGCCTCCCCCCATAGATACTCCTGTAATTCTATTA  350

seq1  ATGTGGTCCCATCACCATATGGCGCAATGATGCCAATTACATTGTTGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTCCCATCACCATATGGCGCAATGATGCCAATTACATTGTTGCAA  400

seq1  CCAGCAGATTTCTCAGAATGGAGGCCATCTTCCCAGCCAGGACACACCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGATTTCTCAGAATGGAGGCCATCTTCCCAGCCAGGACACACCCT  450

seq1  CGTTACCACGATCCCTCTCCCCAAGAACGGGCTGTCTGTCAATGCTGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTACCACGATCCCTCTCCCCAAGAACGGGCTGTCTGTCAATGCTGTCC  500

seq1  ACTAGATTTTTTTGACTCCCGATTATTTAATCAGGATATTCTTGGTGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGATTTTTTTGACTCCCGATTATTTAATCAGGATATTCTTGGTGGTT  550

seq1  CTAAGAAGGTGAAGCGCTACAAGAGGCTGGAATATTTTTCTTTTCATCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAGGTGAAGCGCTACAAGAGGCTGGAATATTTTTCTTTTCATCCC  600

seq1  CCCCCTTTTACAATATATGATAAATACAGCTTTTGGCCTGCACACTGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTTTACAATATATGATAAATACAGCTTTTGGCCTGCACACTGAAG  650

seq1  GCCACTAGGCTTGGATGGTCTTTTGCTTGTTTGTTAGGGTTACTGTGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTAGGCTTGGATGGTCTTTTGCTTGTTTGTTAGGGTTACTGTGATG  700

seq1  TGTGGCGCACTCGGCAGCTACCCAGACAAAACAGCTCCAGAAACAACAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCGCACTCGGCAGCTACCCAGACAAAACAGCTCCAGAAACAACAGC  750

seq1  AGCAAAAGCCACTCGAAGCACCCCAAGCCACGCGGGCTTCCTTTTGAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAGCCACTCGAAGCACCCCAAGCCACGCGGGCTTCCTTTTGAGCT  800

seq1  CCCAAATCCAAGGACTTGGAGCCGGTTCTAAAACTTCTGACAGTGGCCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATCCAAGGACTTGGAGCCGGTTCTAAAACTTCTGACAGTGGCCTA  850

seq1  AAAACATGAAACAAGGGCTGCATCCCCCCCTAGGACTCTATGTAAAATAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATGAAACAAGGGCTGCATCCCCCCCTAGGACTCTATGTAAAATAC  900

seq1  ACCCCACCCTGTAAGAATTACCTCCACTCCACGTGTCAAAATACAGCTGT  950
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACCCCACCCTGT-AGAATTACCTCCACTCCACGTGTCAAAATACAGCTGT  949

seq1  AGCTGTATAGTACAATGCCTCATAAATCCGAAAATGTTTAAAATGCCCAT  1000
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGCTGTATAGTACAATG-CTCATAAATCCGAAAATGTTTAAAATGCCCAT  998

seq1  TGTATTTTCAAAGCTCTGGAAGAGTCATTTTCTAGATTAGCACCCTCTCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTCAAAGCTCTGGAAGAGTCATTTTCTAGATTAGCACCCTCTCT  1048

seq1  TCCCCAACCCTGTGCTAAGCCTGCCTCTTTTTTTTTTCCTTTTCCTGATT  1100
      | ||||||||||||||||||||| ||||||||||||||| |||||||| |
seq2  T-CCCAACCCTGTGCTAAGCCTG-CTCTTTTTTTTTTCC-TTTCCTGA-T  1094

seq1  TCCATATTTCACAATAATTATTAAGTGGTCTTATCTCTCAGGC--TAGCT  1148
      |||| ||||||| ||||||||||||||   ||||| |||||||   | ||
seq2  TCCAAATTTCAC-ATAATTATTAAGTGACTTTATC-CTCAGGCCTAACCT  1142

seq1  TTGCCAATTCAGGCAGTCACTGGC-GATAGTG-ACTGCGTGTCTTATGAA  1196
      | ||||||||| |||||||||||| ||||||| ||||| |||  ||||||
seq2  TGGCCAATTCA-GCAGTCACTGGCGGATAGTGAACTGCATGTTCTATGAA  1191

seq1  TTAGTACATTTAGAAATCTCGTGCTA-AGACA-TGTT-ACCCAGCT  1239
      || ||| ||| ||||||||||||||| ||||| |||| ||||||||
seq2  TTTGTA-ATTGAGAAATCTCGTGCTATAGACACTGTTAACCCAGCT  1236

seq1: chr12_107822390_107823435
seq2: B6Ng01-074D02.g_68_1112 (reverse)

seq1  AAGTGACAG-AAGATTTCCCGGGTGGGCTCCTGGGATTT-CATCTCCAAG  48
      ||||||||| |||| || ||||||||||||||||||||| ||||| ||  
seq2  AAGTGACAGAAAGAATTTCCGGGTGGGCTCCTGGGATTTCCATCTTCA--  48

seq1  GCACAGGCATGCAGGGGACCAGGCTGCTCTTCAGCTTCGCCCTCCATAGC  98
      ||||||||||||| ||||||| ||||||||||||||||||||||||||||
seq2  GCACAGGCATGCA-GGGACCA-GCTGCTCTTCAGCTTCGCCCTCCATAGC  96

seq1  CAGGTGAGGGGAGACAGGATGGGGTTTCAGAGACACTCAGTATGCCATCC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGAGGGGAGACAGGATGGGGTTTCAGAGACACTCAGTATGCCATCC  146

seq1  AAAGCCTTCTCTGAGCCACAAACTCCTGAGTTTCTGGGGATGGAGCCATG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTTCTCTGAGCCACAAACTCCTGAGTTTCTGGGGATGGAGCCATG  196

seq1  AAAATCTGGGATCCTGCTCAGTCTACTTTAGCACTCAGACAGGATATTAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTGGGATCCTGCTCAGTCTACTTTAGCACTCAGACAGGATATTAG  246

seq1  ATGTTTAATATCATTTGGCCACCATACAACTTCTCTTCCTTCTGATTCTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAATATCATTTGGCCACCATACAACTTCTCTTCCTTCTGATTCTA  296

seq1  AAGAGTCTAAAGATTTCATTGGGCCCTTCCTTGCTTCCTGATCCATGCCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCTAAAGATTTCATTGGGCCCTTCCTTGCTTCCTGATCCATGCCT  346

seq1  CTGTCCTCTACATTAGGAACTGAGCC-AAACTTTATGGCTTCTGGAAAAT  397
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTGTCCTCTACATTAGGAACTGAGCCAAAACTTTATGGCTTCTGGAAAAT  396

seq1  TCTAGATGTGTGCTCTCCATGACTCCTTCTTACCAGTGTGTGCATACCAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATGTGTGCTCTCCATGACTCCTTCTTACCAGTGTGTGCATACCAC  446

seq1  ATCACACGCTCACCTGTTCACTAGGAAATAAAATAGTCTTCATTTTATAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACGCTCACCTGTTCACTAGGAAATAAAATAGTCTTCATTTTATAT  496

seq1  TAAAAAGAAAACTCTTCTGAAGCCTGCGGCGATGCTCTGTCCAGTCTACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAAAACTCTTCTGAAGCCTGCGGCGATGCTCTGTCCAGTCTACA  546

seq1  AACTTTAAGGTATGAATATTAAGCCTAAGTATTCAGATGCAGTCAAAAGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTAAGGTATGAATATTAAGCCTAAGTATTCAGATGCAGTCAAAAGA  596

seq1  GCCAATTGATGTGGCTTTTACTTCCCATCAAAGGCCGCCGCTATCTCACA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATTGATGTGGCTTTTACTTCCCATCAAAGGCCGCCGCTATCTCACA  646

seq1  ACACAGAGCCAAATCCTGTAGCCAACCCTGCTTTGCTTCAATCAGATAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGCCAAATCCTGTAGCCAACCCTGCTTTGCTTCAATCAGATAAA  696

seq1  TAGGTACCCCAGAGAAAGCCATTTATCTACCCTACTTCCAGATGTCAGTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTACCCCAGAGAAAGCCATTTATCTACCCTACTTCCAGATGTCAGTT  746

seq1  CTAGGGAGACGGTTTACTACCTGCTGGAGAGACCCAGCTGCCAGTCAGCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGAGACGGTTTACTACCTGCTGGAGAGACCCAGCTGCCAGTCAGCT  796

seq1  TCAGGGGCAGGAATGAGATGTCTCCTTGCTGTGTCCACCGTTCCGTTCCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGCAGGAATGAGATGTCTCCTTGCTGTGTCCACCGTTCCGTTCCC  846

seq1  TTCCAGCAGGGTGAGGGCAGGACTCTGCAAACCAGTGGTCAACCATCACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCAGGGTGAGGGCAGGACTCTGCAAACCAGTGGTCAACCATCACA  896

seq1  AGGGTAGTTGGCCGGTATTGGGTGGTGAAAGTCTAAGATGAGAGGACAAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGTTGGCCGGTATTGGGTGGTGAAAGTCTAAGATGAGAGGACAAG  946

seq1  AAGACCTCTCTAGAGCTCCCTGAAGTCAGAGGAGCGTAAGACCAGGAAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTCTCTAGAGCTCCCTGAAGTCAGAGGAGCGTAAGACCAGGAAGA  996

seq1  TGTGAGGGTCTTGCTAGATGTCTGGTGGTGAAACTGAGACAGAGAATTC  1046
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGGTCTTGCTAGATGTCTGGTGGTGAAACTGAGACAGAGAATTC  1045