BAC Information

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BAC

Clone NameB6Ng01-075N23
Chromosome12 (Build37)
Map Location 41,589,041 - 41,590,132
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043148, Arl4a, LOC100043606, Scin, Gm889, Ifrd1, EG629820, Zfp277, Dock4
Downstream geneLOC638487, LOC100043157, LOC100043162, Lrrn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075N23.bB6Ng01-075N23.g
ACCDH892307DH892308
length1,1081,097
definitionDH892307|Mus musculus domesticus DNA, BAC clone: B6Ng01-075N23, 5' end.DH892308|Mus musculus domesticus DNA, BAC clone: B6Ng01-075N23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatgctaaatctgtctggccttggccttttgccttttttttttt
tccttttttttttgtgttgggggtgatttttaatgactgctttatttcac
tagggtttatccatctgttcaaattgtttatctcatcctgatttaacttt
ggtaagtggtatctatgtagaaaattattcttttttaaaaaagatttgtt
tcaattttatgaagtacaggtttttttaaagtttgccctgtggttatctg
gatttctttggtgtctgtcattatgtcccccttttcattaagaaccattt
tttgtttcattgattttgtttttgttgttctctttctctctgttttattg
atttcagccctgagtttgattatttcttgctatctctcttttggggtatg
atttcttcttttggttctagagttttcagatgtgctgttaagttgctaat
ctcaaacatttgcctgtccttgaactcagttcatagcccagaatggtctt
gacctcatagagatcaacttgcctctgcctaccaagtgctgggaataaag
gtatatacattatgactacccagaaatctctacagttcttttattttttc
tgtaggcacatagtgctgtgaccttgccttttagactgttttgattgtat
cccatgtttgtttatgatatatattcattttcattcatgtgcactgactc
attttaatttttgcttttacctgttaagacttactgtccaactatgtggt
caattttggagaaagttccaaaagatgcagagaaggtttattcttttgtg
tttgggtaaaatgttctgtaaatatctgtctgtatcgtttgttttataat
gtacactagctctggcatttctctatttagtgtattagatgacttttcta
ttatgagagtggggtattgaagtctcccactttcagtgtgtaaggtcaat
atatgttttaagttgtacttgtatttctttttacatacgtgagtgtcttg
tatttgaacatagatgtaaaaactacatgtcatttcagtggatttttctt
catgaatatgcaaatgtctctccacatcttaatgattagttttaaggtga
acatatat
gaattctgaggttagacatgtttccttagctgtgatggttggtgacagct
atagtcgcatggcatcagaatggcagtgatacaagtcatcacaggcagag
tagtggagctgctgtacctgactcaggtcgcctccaggattagggggtag
gttatcaggagtgtaggtacagtcggctcacagctatatcactgaatttc
tgattctcaggaattgcgtttaaccaaatgaggtctcctcactttctacc
agctgctgctaactgccactgttctttgcaaggtaaaaagacctacctac
cccctcatccagagcgaaaccgctggggagaaaagcatccactctaggct
ttctgtgggattaactgggctttctcagtccagcttctccctgcctttct
ctccttcagcactcacagcctgtttcagatgttctcagtaaataaactgc
acagaaacctctttctcagaatgattttctggatctgagagccatgttag
tcagtcctgttacaagcgtttatatacaaacaactacggggacctagcct
tgaccgatttttgtgtcttaatattgactttacatttctatgggcaagag
atgaaaatggttttattatgtatgcacttcatgatagtatagtgtgggct
acatcttgtcatttgctaagtacctgtatttatcctatcagatatacaca
aaacacttatgtagtcagtcaagggattgcaagtactaactgaccgtggg
atgcttcctatccacagcttgggctctagaagaaagcaggtcatgcacgc
catgaagaattaaccagtaagcagcaccctaccatagtctctgcatcagc
tcctacctccagctttctgtcttgtttgagttccctatcctgactttcct
ttgatgatgaacagtgatatggaagtaatcctttccctccccaacttgct
ctttgggtccttgtggtttggtgcagcaatagaactctaactaaggcagc
cctcaacatattatcacaatgggggcttcccagatgacagtgtgagaagg
agtgtctgtaatctccctgggcaagcattagtaatgaattcctggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_41589041_41590132
seq2: B6Ng01-075N23.g_68_1164 (reverse)

seq1  TACCAGGAA-TCATTACT-ATGC-TGGCCAGGGAGATCACAGACACTCC-  46
      ||||||||| |||||||| |||| || |||||||||| ||||||||||| 
seq2  TACCAGGAATTCATTACTAATGCTTGCCCAGGGAGATTACAGACACTCCT  50

seq1  TCTCACACTGTCATCTGGGGAAGCCCCCATTGTGGATAATATGGTTGAGG  96
      |||||||||||||||| |||||||||||||||| |||||||| |||||||
seq2  TCTCACACTGTCATCT-GGGAAGCCCCCATTGT-GATAATAT-GTTGAGG  97

seq1  GCTGCCTTAGTTAGAGTTCTATTGCTGCACCAAACCACCAGGA-CCAAAG  145
      |||||||||||||||||||||||||||||||||||||| |||| ||||||
seq2  GCTGCCTTAGTTAGAGTTCTATTGCTGCACCAAACCACAAGGACCCAAAG  147

seq1  AGCAAGTTGGGGAGGGAAAGGATTACTTCCATATCACTGTTCATCATCAA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTTGGGGAGGGAAAGGATTACTTCCATATCACTGTTCATCATCAA  197

seq1  AGG-AAGTCAGGATA-GGAACTCAAACAAGACAGAAAGCTGGAGGTAGGA  243
      ||| ||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGGAAAGTCAGGATAGGGAACTCAAACAAGACAGAAAGCTGGAGGTAGGA  247

seq1  GCTGATGCAGAGACTATGGTAGGGTGCTGCTTACTGGTTAATTCTTCATG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGCAGAGACTATGGTAGGGTGCTGCTTACTGGTTAATTCTTCATG  297

seq1  GCGTGCATGACCTGCTTTCTTCTAGAGCCCAAGCTGTGGATAGGAAGCAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGCATGACCTGCTTTCTTCTAGAGCCCAAGCTGTGGATAGGAAGCAT  347

seq1  CCCACGGTCAGTTAGTACTTGCAAT-CCTTGACTGACTACATAAGTGTTT  392
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCCACGGTCAGTTAGTACTTGCAATCCCTTGACTGACTACATAAGTGTTT  397

seq1  TGTGTATATCTGATAGGATAAATACAGGTACTTAGCAAATGACAAGATGT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATATCTGATAGGATAAATACAGGTACTTAGCAAATGACAAGATGT  447

seq1  AGCCCACACTATACTATCATGAAGTGCATACATAATAAAACCATTTTCAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACACTATACTATCATGAAGTGCATACATAATAAAACCATTTTCAT  497

seq1  CTCTTGCCCATAGAAATGTAAAGTCAATATTAAGACACAAAAATCGGTCA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCCCATAGAAATGTAAAGTCAATATTAAGACACAAAAATCGGTCA  547

seq1  AGGCTAGGTCCCCGTAGTTGTTTGTATATAAACGCTTGTAACAGGACTGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGGTCCCCGTAGTTGTTTGTATATAAACGCTTGTAACAGGACTGA  597

seq1  CTAACATGGCTCTCAGATCCAGAAAATCATTCTGAGAAAGAGGTTTCTGT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATGGCTCTCAGATCCAGAAAATCATTCTGAGAAAGAGGTTTCTGT  647

seq1  GCAGTTTATTTACTGAGAACATCTGAAACAGGCTGTGAGTGCTGAAGGAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTATTTACTGAGAACATCTGAAACAGGCTGTGAGTGCTGAAGGAG  697

seq1  AGAAAGGCAGGGAGAAGCTGGACTGAGAAAGCCCAGTTAATCCCACAGAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGCAGGGAGAAGCTGGACTGAGAAAGCCCAGTTAATCCCACAGAA  747

seq1  AGCCTAGAGTGGATGCTTTTCTCCCCAGCGGTTTCGCTCTGGATGAGGGG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGAGTGGATGCTTTTCTCCCCAGCGGTTTCGCTCTGGATGAGGGG  797

seq1  GTAGGTAGGTCTTTTTACCTTGCAAAGAACAGTGGCAGTTAGCAGCAGCT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTAGGTCTTTTTACCTTGCAAAGAACAGTGGCAGTTAGCAGCAGCT  847

seq1  GGTAGAAAGTGAGGAGACCTCATTTGGTTAAACGCAATTCCTGAGAATCA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAAAGTGAGGAGACCTCATTTGGTTAAACGCAATTCCTGAGAATCA  897

seq1  GAAATTCAGTGATATAGCTGTGAGCCGACTGTACCTACACTCCTGATAAC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCAGTGATATAGCTGTGAGCCGACTGTACCTACACTCCTGATAAC  947

seq1  CTACCCCCTAATCCTGGAGGCGACCTGAGTCAGGTACAGCAGCTCCACTA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCCCTAATCCTGGAGGCGACCTGAGTCAGGTACAGCAGCTCCACTA  997

seq1  CTCTGCCTGTGATGACTTGTATCACTGCCATTCTGATGCCATGCGACTAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTGTGATGACTTGTATCACTGCCATTCTGATGCCATGCGACTAT  1047

seq1  AGCTGTCACCAACCATCACAGCTAAGGAAACATGTCTAACCTCAGAATTC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCACCAACCATCACAGCTAAGGAAACATGTCTAACCTCAGAATTC  1097