MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-076B16
Chromosome	12 (Build37)
Map Location	53,382,290 - 53,383,405
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100039525, 6030408C04Rik, Scfd1, LOC620390, LOC100039578, Coch, Strn3, Ap4s1, Hectd1, EG544864, LOC100039476, Heatr5a, LOC676784, 6530401N04Rik, Gpr33, LOC100039627, Nubpl
Downstream gene	Arhgap5, Akap6, Npas3
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039525 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039525
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 59 ESTs, 6 Proteins

name	6030408C04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217558 MGI:2444298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scfd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76983 MGI:1924233
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620390 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620390
definition	note : high mobility group protein 1 pseudogene pseudo : _no_value

name	LOC100039578 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039578
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Coch (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12810 MGI:1278313
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Strn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94186 MGI:2151064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ap4s1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11782 MGI:1337065
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hectd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207304 MGI:2384768
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 244 ESTs, 5 Proteins

name	EG544864 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:544864 MGI:3643232
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs

name	LOC100039476 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039476
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Heatr5a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320487 MGI:2444133
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC676784 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676784
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	6530401N04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328092 MGI:1923485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr33 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14762 MGI:1277106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039627 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039627
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 ESTs, 5 Proteins

name	Nubpl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76826 MGI:1924076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arhgap5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11855 MGI:1332637
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akap6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238161 MGI:3050566
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Npas3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27386 MGI:1351610
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039525 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263236 GeneID:100039525
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 59 ESTs, 6 Proteins product : similar to ribosomal protein S11 transcript_id : XM_001473056.1

name	6030408C04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62821812 GeneID:217558 MGI:2444298
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6030408C04 gene transcript_id : NM_001015099.1

name	Scfd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802288 GeneID:76983 MGI:1924233
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sec1 family domain containing 1 transcript_id : NM_029825.2

name	Coch (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354323 GeneID:12810 MGI:1278313
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coagulation factor C homolog (Limulus polyphemus) transcript_id : NM_007728.3

name	Strn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16418468 GeneID:94186 MGI:2151064
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : striatin, calmodulin binding protein 3 transcript_id : NM_052973.1

name	Ap4s1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893151 GeneID:11782 MGI:1337065
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adaptor-related protein complex AP-4, sigma 1 transcript_id : NM_021710.2

name	Hectd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263230 GeneID:207304 MGI:2384768
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 244 ESTs, 5 Proteins product : HECT domain containing 1 transcript_id : XM_974905.2

name	EG544864 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392843 GeneID:544864 MGI:3643232
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs product : predicted gene, EG544864 transcript_id : XM_974939.1

name	LOC100039476 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263232 GeneID:100039476
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039476 transcript_id : XM_001472868.1

name	Heatr5a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130348 GeneID:320487 MGI:2444133
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HEAT repeat containing 5A transcript_id : NM_177171.4

name	6530401N04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384131 GeneID:328092 MGI:1923485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6530401N04 gene transcript_id : NM_029545.2

name	Gpr33 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33469078 GeneID:14762 MGI:1277106
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 33 transcript_id : NM_008159.1

name	LOC100039627 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263238 GeneID:100039627
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 ESTs, 5 Proteins product : similar to CD79A antigen (immunoglobulin-associated alpha) transcript_id : XM_001473232.1

name	Nubpl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110626046 GeneID:76826 MGI:1924076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleotide binding protein-like transcript_id : NM_029760.1

name	Arhgap5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86262150 GeneID:11855 MGI:1332637
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 5 transcript_id : NM_009706.2

name	Akap6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116517310 GeneID:238161 MGI:3050566
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein 6 transcript_id : NM_198111.2

name	Npas3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305318 GeneID:27386 MGI:1351610
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuronal PAS domain protein 3 transcript_id : NM_013780.1

name	LOC100039525 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263237 GeneID:100039525
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473106.1

name	6030408C04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62821813 CCDS:CCDS25900.1 GeneID:217558 MGI:2444298
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC217558 protein_id : NP_001015099.1

name	Scfd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037481 GeneID:76983 MGI:1924233
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006904 - vesicle docking during exocytosis [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence IEA] codon_start : 1 product : sec1 family domain containing 1 protein_id : NP_084101.1

name	Coch (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680956 CCDS:CCDS25901.1 GeneID:12810 MGI:1278313
definition	GO_process : GO:0007596 - blood coagulation [Evidence IEA] codon_start : 1 product : coagulation factor C homolog (Limulus polyphemus) protein_id : NP_031754.1

name	Strn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16418469 GeneID:94186 MGI:2151064
definition	GO_function : GO:0005516 - calmodulin binding [Evidence IEA] codon_start : 1 note : SG2NA beta isoform; nuclear autoantigen product : striatin, calmodulin binding protein 3 protein_id : NP_443205.1

name	Ap4s1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17998681 GeneID:11782 MGI:1337065
definition	GO_component : GO:0005905 - coated pit [Evidence IEA]; GO:0030662 - coated vesicle membrane [Evidence IEA]; GO:0005802 - Golgi trans face [Evidence TAS] GO_process : GO:0006886 - intracellular protein transport [Evidence TAS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence TAS] codon_start : 1 product : adaptor-related protein complex AP-4, sigma 1 protein_id : NP_068356.1

name	Hectd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263231 GeneID:207304 MGI:2384768
definition	codon_start : 1 product : HECT domain containing 1 protein_id : XP_979999.2

name	EG544864 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392844 GeneID:544864 MGI:3643232
definition	codon_start : 1 product : hypothetical protein protein_id : XP_980033.1

name	LOC100039476 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263233 GeneID:100039476
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472918.1

name	Heatr5a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38505263 CCDS:CCDS25902.1 GeneID:320487 MGI:2444133
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC320487 protein_id : NP_796145.2

name	6530401N04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31324532 CCDS:CCDS25903.1 GeneID:328092 MGI:1923485
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA] GO_process : GO:0019478 - D-amino acid catabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC328092 protein_id : NP_083821.1

name	Gpr33 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469079 CCDS:CCDS25904.1 GeneID:14762 MGI:1277106
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004982 - N-formyl peptide receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 33 protein_id : NP_032185.1

name	LOC100039627 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263239 GeneID:100039627
definition	codon_start : 1 product : similar to CD79A antigen (immunoglobulin-associated alpha) protein_id : XP_001473282.1

name	Nubpl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110626047 GeneID:76826 MGI:1924076
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : nucleotide binding protein-like protein_id : NP_084036.1

name	Arhgap5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86262151 GeneID:11855 MGI:1332637
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005100 - Rho GTPase activator activity [Evidence IEA] GO_process : GO:0008361 - regulation of cell size [Evidence IMP]; GO:0007266 - Rho protein signal transduction [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 product : Rho GTPase activating protein 5 protein_id : NP_033836.2

name	Akap6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116517311 GeneID:238161 MGI:3050566
definition	GO_component : GO:0005635 - nuclear envelope [Evidence ISS]; GO:0016529 - sarcoplasmic reticulum [Evidence ISS] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0051018 - protein kinase A binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : anchor protein 6; A-kinase anchoring protein alpha; A-kinase anchoring protein beta product : A kinase (PRKA) anchor protein 6 protein_id : NP_932779.2

name	Npas3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305319 CCDS:CCDS25907.1 GeneID:27386 MGI:1351610
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0007610 - behavior [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0042711 - maternal behavior [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0035176 - social behavior [Evidence IMP]; GO:0006350 - transcription [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 exception : mismatches in translation product : neuronal PAS domain protein 3 protein_id : NP_038808.1

name	LOC100039578 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039578
definition	number : 1 pseudo : _no_value

name	LOC676784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676784
definition	number : 1 pseudo : _no_value

name	LOC676784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676784
definition	number : 2 pseudo : _no_value

clone name	MSMg01-329O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529F11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-170H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268C05
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-076B16.b	B6Ng01-076B16.g
ACC	DH892468	DH892469
length	1,253	1,108
definition	DH892468\|Mus musculus domesticus DNA, BAC clone: B6Ng01-076B16, 5' end.	DH892469\|Mus musculus domesticus DNA, BAC clone: B6Ng01-076B16, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctgaaatgctcacgctaataacgatttagaagtccttgaaaaact ccaactatcaagacagaaacaagaagagagtatcagttagctagatgccc attaaagacatgtagtttttaattaaaatttttctcacaaaaaaaaaatg tcagaggcagagagcttccaacaaattctcttaaagacctgtgaagagat gttaccaccaccaagacatttaaagatgaggggtttcgattcttgccata ctccccactcaacttgcctattggcctgtctagaaatcagatgagcattt ggttataaacttaaccagatgagatgctatccctgctgctgttccaggtg tattttcattgcttgaacaaattaacacagccactggtactaagactgaa caggtatatggtgtcttgctagtcatccctgcaaagaaggaccatcggaa gcactttcctcgccgccagtaagtctagcattgtgccttcactgtctcac cttggggctataccaatcctctagccctagatcaaaatttagttcataag taacttcaacccttccccttccagaaggcaccacacaggtctattacacc aatgctgactggactcagctacgagcaacacattgtctaaaatgggaaag aaaattgacaaaaattcagacatctcagtgacaattttaacagtccagtg gtatggaatgtattgaaatatccctggaagggtgaaggagaagttggtgt ttctggctacttctataatcacaagagaggaatacacataatagatatct ttggattataaagacaacacattcctagatttggtaaattgtttggccta attactatggacatgaaaaccttagttttgagtggggctagaacagaaat gtctctgtagtagtcccagctactacagaagttccgttgccaccaaagcc atctcgtctgctaagtagatgccatagtggcttgcagagatgctatttgc gggttttgtgggcctcatgggtgagtcacactcagagcctacagattgtc atcttggcactcctatggactactaccctctggagaacaggtttagcttg atcaagggcttaggtactaagacttatgattaccatggccatcctgtggt tattaatactgaccaagttctctcctatgaactgagtgtcagctctcacc gtaaggctcgtacagttacttagcagacactccggtcacgtggattgtag att	gaattcttgatgagatccctgagtcttttaacacccaaaataatgacatc ttttgcaaactaagcactctttttactattgataacatttccttgtagtc agtagagggagcacaaggttctatcagatctatcagagaacagaagtgac atcacttgtaatggtatacaaagagtgtggtctaggacagctcttattgc ttcgtgtgtattaaactataaaaaattgaggattgccatgtagaaaggca agggtagaatgtttcaagttaagagattgtattttaagctgtgagattca tcacaagagaaaaattggcatgattcctttaaaatttacatttttggatg ataatgtgtagactggttaaagactaaaatgtcattttattggaagcttt gtctatgttacatttttcataacttctgagtattattagaggagtatttg aaatggttacttatatgaaatgcttgaaatttcggaacaataaaagaggg cgtttctgtaaaaggaccaaaaccttagtaagccctaaactgtgatggga tcaagaatttaattcttaaaaatgcagtatatgcttttgtttaaaaaaca tcatataccaaagtatctttataaacctgtctggtgctttctgtggtaga ttacacattgtgtgacatttggtgacatgaaaagtgattgctatccttgt aaggtttgaatggctctagtgtaggtacaaaggaactctgataaaatgga tgctaatggttaaggttaaatcactttcatctttctctagactctcgtgg caatcaaaataatgccaccgaacatttttatatctcttatatagatatat ttttaaaatgagcagctctttttagttaaatagggccagtgtaaataggt ccattttatatgctgagattgtagagttatagaatacattaacaaaacta gaagttagagctctgacgtctggtttaaagattactaaaatttcatgcgt gctaatctaaataagtgtttttgaaaatgagcacaagtagttttgatctt cgttttttgctaagtggccattttgtgccagggattctcattaggttggt tgctaaaa
quality values	Open. Hide. 61 41 19 38 61 53 43 47 61 61 35 43 47 47 61 38 43 47 61 61 61 55 55 61 55 12 15 12 12 14 23 41 19 11 37 41 40 59 52 61 61 61 61 59 59 59 59 61 61 61 61 59 59 61 61 61 59 61 59 59 59 59 61 61 59 59 61 59 52 59 45 36 37 43 28 26 55 52 61 61 61 59 61 59 59 52 61 61 59 59 59 61 59 59 61 61 61 61 59 61 61 61 61 59 55 37 55 61 59 49 59 59 44 49 45 61 61 59 44 55 59 59 59 61 59 59 59 61 61 59 59 59 59 59 61 59 55 55 59 59 61 59 59 59 59 59 59 61 61 61 59 59 59 49 61 59 59 59 59 59 61 59 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 59 61 61 61 59 61 59 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 59 59 59 61 59 61 61 61 61 59 59 52 61 61 61 61 59 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 59 61 61 59 61 52 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 52 55 61 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 45 61 61 61 61 61 61 61 61 61 61 61 61 61 53 39 53 61 61 39 61 53 52 47 46 53 53 53 53 53 53 47 57 57 57 53 53 47 53 53 50 57 53 53 57 57 57 57 57 57 57 53 57 57 57 53 53 53 57 50 53 57 57 53 57 53 57 47 53 53 53 53 53 53 53 57 57 57 53 57 57 53 57 57 53 53 57 57 47 47 34 47 28 35 33 47 43 34 57 57 53 45 38 57 57 53 47 38 57 52 52 20 57 42 33 57 53 53 47 47 34 53 57 41 38 30 53 53 57 46 41 31 57 52 43 50 45 53 41 32 50 36 57 40 37 42 50 57 43 47 52 33 43 24 38 34 50 46 37 57 46 50 42 42 57 57 57 50 57 39 40 52 9 42 34 28 52 52 53 38 46 37 17 41 47 24 41 33 53 39 30 40 37 52 30 41 37 53 46 29 52 32 52 42 53 42 41 39 40 42 44 37 52 35 52 40 40 47 57 33 45 27 40 27 30 34 32 40 37 48 34 40 40 40 40 48 44 40 33 40 32 40 32 57 40 29 43 34 35 32 33 34 40 46 32 30 30 27 29 31 31 36 38 29 30 44 31 48 34 37 30 30 17 51 47 40 29 28 30 46 29 28 36 34 15 51 44 45 47 26 31 29 29 24 48 20 28 39 29 28 29 29 29 29 28 29 29 29 29 46 51 34 25 33 39 35 35 20 38 51 51 34 24 29 31 29 36 39 39 30 22 28 29 29 29 35 28 29 24 43 51 38 30 34 20 29 28 41 29 29 24 38 31 28 6 6 10 33 51 26 29 20 28 38 24 28 34 34 29 16 23 34 32 15 31 39 22 31 18 12 30 20 23 27 17 15 46 8 36 9 51 14 18 23 23 31 21 28 16 15 29 31 33 27 33 25 39 30 22 27 17 33 22 31 25 34 15 34 34 17 25 31 39 28 24 23 29 20 21 12 38 13 16 13 22 31 20 30 28 51 28 28 20 23 51 19 29 38 51 14 17 9 23 35 21 28 34 14 30 14 16 33 39 27 23 23 33 13 30 19 15 6 13 9 16 14 10 5 17 8 30 28 21 21 10 9 6 30 22 22 29 18 25 26 11 20 28 9 16 18 17 5 5 15 24 31 14 11 20 14 27 19 16 14 26 25 25 25 27 34 15 10 10 12 21 6 10 9 33 26 6 5 8 17 8 26 15 23 14 24 16 13 24 20 23 15 13 10 9 24 13 4 3 9 7 4 6 25 10 22 12 17 11 7 14 11 16 8 22 6 13 17 8 23 11 15 16 11 13 23 18 3 4 13 18 11 14 8 16 8 13 13 4 3 13 7 10 5 19 13 3 3 1 3 11 13 14 5 6 5 5 6 5 4 6 10 19 16 4 2 3 8 9 20 10 6 3 1 3 8 5 2 4 3 6 4 3 3 4 2 4 2 5 4 12 5 5 11 13 4 6 5 4 3 3 5 9 7 13 20 4 7 8 20 8 9 3 4 8 7 13 5 7 4 3 3 4 3 3 4 6 9 6 4 6 4 4 2 4 4 16 4 3 4 12 2	Open. Hide. 61 49 52 40 15 17 13 12 11 9 23 16 59 36 59 40 52 59 59 59 61 59 61 61 61 61 61 61 61 59 59 61 59 61 61 61 59 59 59 61 61 59 59 59 61 59 59 59 52 49 28 30 36 43 44 41 36 36 61 61 61 59 59 59 59 61 59 61 61 59 59 59 55 59 59 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 59 59 59 61 44 55 44 59 61 61 61 61 61 61 59 59 59 61 59 61 61 59 59 61 61 59 52 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 52 55 61 61 61 61 55 55 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 52 61 61 61 61 61 61 53 61 53 61 61 53 61 61 61 61 61 61 61 61 53 61 53 61 53 61 61 61 61 53 61 61 61 61 61 61 61 61 50 47 52 61 61 53 61 61 61 61 61 61 61 61 61 52 61 61 52 61 61 61 61 39 61 50 61 53 61 42 37 61 53 61 61 61 61 61 61 61 53 61 61 61 53 53 57 53 53 47 53 53 53 53 57 57 57 57 57 57 57 53 57 53 37 38 47 53 53 57 53 53 53 57 57 46 57 57 53 53 53 47 43 57 57 57 53 45 53 53 57 57 47 50 53 38 57 53 53 57 53 57 50 57 53 57 57 42 57 42 50 57 53 57 53 53 42 52 41 35 53 45 52 33 57 53 52 50 53 45 57 53 57 42 53 53 53 50 50 38 38 53 57 53 34 50 57 38 38 31 53 53 57 57 57 41 34 43 53 41 30 57 52 50 53 43 41 57 52 53 45 57 39 52 43 26 26 10 53 53 37 39 53 36 57 53 33 53 52 52 44 52 47 57 38 50 19 46 28 34 39 28 57 37 23 38 37 18 30 42 53 37 53 41 24 30 57 57 53 32 57 57 39 28 48 40 36 44 52 36 57 57 33 48 30 47 29 52 18 44 45 57 37 37 53 34 48 32 57 23 36 31 39 41 24 57 38 40 26 37 37 40 29 37 35 33 37 41 53 30 29 44 46 31 31 29 29 36 27 51 51 44 41 35 29 31 36 27 47 18 45 47 32 46 41 30 27 29 51 46 51 29 37 29 29 39 39 35 48 28 31 31 28 35 33 29 29 28 25 29 38 22 13 46 51 51 48 33 51 51 43 29 29 31 21 33 21 23 33 35 34 28 51 51 51 46 28 26 35 28 24 46 24 28 29 24 51 29 25 32 16 26 27 26 17 39 51 25 17 29 33 29 28 43 29 23 35 51 51 39 28 27 17 21 21 29 33 28 43 22 17 11 24 29 15 35 23 43 23 21 27 29 28 21 29 39 15 14 23 33 21 43 29 22 24 38 15 51 51 31 25 26 29 22 23 28 13 28 28 26 19 29 25 22 33 18 32 8 9 15 23 27 27 15 34 21 5 32 19 28 51 18 15 38 8 30 17 26 17 28 31 35 23 22 30 6 18 10 5 16 15 33 5 18 22 17 19 8 6 7 6 15 9 9 4 5 6 22 5 7 7 32 38 39 13 8 20 30 34 20 17 12 7 8 15 7 28 13 31 11 12 21 10 9 23 26 9 5 7 15 17 13 23 27 4 4 20 30 37 42 13 12 31 9 20 13 7 11 8 10 24 26 9 19 5 27 12 5 4 10 4 4 3 18 26 12 3 7 11 2 5 12 8 5 4 8 7 5 18 3 4 4 16 9 15 9 5 27 30 26 19

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_53382290_53383405
seq2: B6Ng01-076B16.g_68_1175

seq1  GAATTCTTGATGAGATCCCTGAGTCTTTTAACACCCAAAATAATGACATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGATGAGATCCCTGAGTCTTTTAACACCCAAAATAATGACATC  50

seq1  TTTTGCAAACTAAGCACTCTTTTTACTATTGATAACATTTCCTTGTAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCAAACTAAGCACTCTTTTTACTATTGATAACATTTCCTTGTAGTC  100

seq1  AGTAGAGGGAGCACAAGGTTCTATCAGATCTATCAGAGAACAGAAGTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGGGAGCACAAGGTTCTATCAGATCTATCAGAGAACAGAAGTGAC  150

seq1  ATCACTTGTAATGGTATACAAAGAGTGTGGTCTAGGACAGCTCTTATTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTGTAATGGTATACAAAGAGTGTGGTCTAGGACAGCTCTTATTGC  200

seq1  TTCGTGTGTATTAAACTATAAAAAATTGAGGATTGCCATGTAGAAAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTGTGTATTAAACTATAAAAAATTGAGGATTGCCATGTAGAAAGGCA  250

seq1  AGGGTAGAATGTTTCAAGTTAAGAGATTGTATTTTAAGCTGTGAGATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGAATGTTTCAAGTTAAGAGATTGTATTTTAAGCTGTGAGATTCA  300

seq1  TCACAAGAGAAAAATTGGCATGATTCCTTTAAAATTTACATTTTTGGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGAGAAAAATTGGCATGATTCCTTTAAAATTTACATTTTTGGATG  350

seq1  ATAATGTGTAGACTGGTTAAAGACTAAAATGTCATTTTATTGGAAGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTGTAGACTGGTTAAAGACTAAAATGTCATTTTATTGGAAGCTTT  400

seq1  GTCTATGTTACATTTTTCATAACTTCTGAGTATTATTAGAGGAGTATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATGTTACATTTTTCATAACTTCTGAGTATTATTAGAGGAGTATTTG  450

seq1  AAATGGTTACTTATATGAAATGCTTGAAATTTCGGAACAATAAAAGAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTTACTTATATGAAATGCTTGAAATTTCGGAACAATAAAAGAGGG  500

seq1  CGTTTCTGTAAAAGGACCAAAACCTTAGTAAGCCCTAAACTGTGATGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCTGTAAAAGGACCAAAACCTTAGTAAGCCCTAAACTGTGATGGGA  550

seq1  TCAAGAATTTAATTCTTAAAAATGCAGTATATGCTTTTGTTTAAAAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAATTTAATTCTTAAAAATGCAGTATATGCTTTTGTTTAAAAAACA  600

seq1  TCATATACCAAAGTATCTTTATAAACCTGTCTGGTGCTTTCTGTGGTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATACCAAAGTATCTTTATAAACCTGTCTGGTGCTTTCTGTGGTAGA  650

seq1  TTACACATTGTGTGACATTTGGTGACATGAAAAGTGATTGCTATCCTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACATTGTGTGACATTTGGTGACATGAAAAGTGATTGCTATCCTTGT  700

seq1  AAGGTTTGAATGGCTCTAGTGTAGGTACAAAGGAACTCTGATAAAATGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTGAATGGCTCTAGTGTAGGTACAAAGGAACTCTGATAAAATGGA  750

seq1  TGCTAATGGTTAAGGTTAAATCACTTTCATCTTTCTCTAGACTCTCGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATGGTTAAGGTTAAATCACTTTCATCTTTCTCTAGACTCTCGTGG  800

seq1  CAATCAAAATAATGCCACCGAACATTTTTATATCTCTTATATAGATATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAAAATAATGCCACCGAACATTTTTATATCTCTTATATAGATATAT  850

seq1  TTTTAAAATGAGCAGCTCTTTTTAGTTAAATAGGGCCAGTGTAAATAGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATGAGCAGCTCTTTTTAGTTAAATAGGGCCAGTGTAAATAGGT  900

seq1  CCATTTTATATGCTGAGATTGTAGAGTTATAGAATACATTAACAAAACTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTATATGCTGAGATTGTAGAGTTATAGAATACATTAACAAAACTA  950

seq1  GAAGTTAGAGCTCTTGACGTCTGGTTTAAAGAATTACTAAAATTTCATGC  1000
      ||||||||||||| ||||||||||||||||| ||||||||||||||||||
seq2  GAAGTTAGAGCTC-TGACGTCTGGTTTAAAG-ATTACTAAAATTTCATGC  998

seq1  GGTGCTAATCTAAGATAGGTGTTTTTGAAAATGAGCACAAGTAGTTTTAG  1050
       |||||||||||| ||| |||||||||||||||||||||||||||||| |
seq2  -GTGCTAATCTAA-ATAAGTGTTTTTGAAAATGAGCACAAGTAGTTTT-G  1045

seq1  ATCTTCAGTTTTTTGCTAAGTGCCCATTTTGTGCAGGGTATTTTCTCATT  1100
      |||||| ||||||||||||||| |||||||||||  || |  ||||||||
seq2  ATCTTC-GTTTTTTGCTAAGTGGCCATTTTGTGCCAGGGA--TTCTCATT  1092

seq1  AGTTTGGTTGCTAAAA  1116
      || |||||||||||||
seq2  AGGTTGGTTGCTAAAA  1108

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Alignment Information