BAC Information

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BAC

Clone NameB6Ng01-076E18
Chromosome12 (Build37)
Map Location 71,247,984 - 71,411,718
singlet/doubletdoublet
Overlap geneGm804, Pygl, Trim9
Upstream geneRps29, Ppil5, Rpl36al, Mgat2, 1110034A24Rik, 9330151L19Rik, Pole2, Klhdc1, Klhdc2, Sdccag1, Arf6, LOC100040856, LOC100040862, Gm71, Sos2, LOC100040879, L2hgdh, Atp5s, Cdkl1, Map4k5, Spg3a, EG622339, Sav1, LOC100040999, Nin, ENSMUSG00000056391
Downstream geneTxndc1, LOC100040965, LOC100041061, Frmd6, Actr10, Psma3, 3110056K07Rik, Arid4a, Timm9, LOC100041035, 2700049A03Rik, LOC666162, Dact1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076E18.bB6Ng01-076E18.g
ACCDH892604DH892605
length797320
definitionDH892604|Mus musculus domesticus DNA, BAC clone: B6Ng01-076E18, 5' end.DH892605|Mus musculus domesticus DNA, BAC clone: B6Ng01-076E18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,410,923 - 71,411,718)(71,247,984 - 71,248,303)
sequence
gaattctcactgtgtgtgtgtgtgtgtgtatggtatgtatgtatgtatgt
atgtatgtatgtatatgtgtacatatatacacatatatgtcacatatata
tgtcatatatgtatcaattctcattacatatatgtaatgtacatatacat
ctatttatgtattcaaaataaattgttctttcatttgaacaatatgggaa
attatactaaaagccatatacctcccaattgaaagttttgcctttatttc
tatattttcccttgccaaaacaaatataaaaatataagtgatctgggttt
cccagttagtgttggtatgcacccctttgtggtgttttcttaccagatac
agatggctctatgcatgcctttcctaaatgagacctcacaacccttgagt
cataccccatcctgtttctctttgcacttcaagaccagacctcttgtcct
tactagtgctgggtgtgtcctgaacacggaagcataggcagccaggtagc
tttccgtggtgcccttgttggaacagtgactttgcacatcctcagaatga
ttttctaagctgtgtccattcccctgtatcagccactgctcagcacagct
ttcaccatccctccctaccccccagaagctctggtaagagacagaatgga
caaacgcatgtggcatcagaggcaggccagaacagtatcagtgaaagggg
acaggggactctgggaagaggctaatttgtgcaggagcccagagcctcaa
gtccactagaaatggcaggttaaatgctctcctacaggcggtaccag
ttgctaaccttgcttgcatctctgcctttgtcactgtcctctttgctggg
tctaaccttctcacctctgcattaacaccagacagcttacactgttggat
ggctctgtagaggaatggaggtgggccagagttctgtgagggacatttgg
gtctacaggataaatattgtttaacttcttagagggtcgaccttattcaa
agttgggacatagttctagaaaagcaagcaatgatggtataaggtggatt
agttgggagtaagtttggctataagtagagagaaagaagaagaagaggag
gagggagaagaagaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_71410923_71411718
seq2: B6Ng01-076E18.b_46_842 (reverse)

seq1  CTGGTACCGCCTGTAGGCGAGCATTTAACCTGCCATTTCTAGTGGACTTG  50
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTGGTACCGCCTGTAGGAGAGCATTTAACCTGCCATTTCTAGTGGACTTG  50

seq1  AGGCTCTGGGCTCCTGCAC-AATTAGCCTCTTCCCAGAGTCCCCTGTCCC  99
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGGCTCTGGGCTCCTGCACAAATTAGCCTCTTCCCAGAGTCCCCTGTCCC  100

seq1  CTTTCACTGATACTGTTCTGGCCTGCCTCTGATGCCACATGCGTTTGTCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACTGATACTGTTCTGGCCTGCCTCTGATGCCACATGCGTTTGTCC  150

seq1  ATTCTGTCTCTTACCAGAGCTTCTGGGGGGTAGGGAGGGATGGTGAAAGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTCTCTTACCAGAGCTTCTGGGGGGTAGGGAGGGATGGTGAAAGC  200

seq1  TGTGCTGAGCAGTGGCTGATACAGGGGAATGGACACAGCTTAGAAAATCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGAGCAGTGGCTGATACAGGGGAATGGACACAGCTTAGAAAATCA  250

seq1  TTCTGAGGATGTGCAAAGTCACTGTTCCAACAAGGGCACCACGGAAAGCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGGATGTGCAAAGTCACTGTTCCAACAAGGGCACCACGGAAAGCT  300

seq1  ACCTGGCTGCCTATGCTTCCGTGTTCAGGACACACCCAGCACTAGTAAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCTGCCTATGCTTCCGTGTTCAGGACACACCCAGCACTAGTAAGG  350

seq1  ACAAGAGGTCTGGTCTTGAAGTGCAAAGAGAAACAGGATGGGGTATGACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGGTCTGGTCTTGAAGTGCAAAGAGAAACAGGATGGGGTATGACT  400

seq1  CAAGGGTTGTGAGGTCTCATTTAGGAAAGGCATGCATAGAGCCATCTGTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTTGTGAGGTCTCATTTAGGAAAGGCATGCATAGAGCCATCTGTA  450

seq1  TCTGGTAAGAAAACACCACAAAGGGGTGCATACCAACACTAACTGGGAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTAAGAAAACACCACAAAGGGGTGCATACCAACACTAACTGGGAAA  500

seq1  CCCAGATCACTTATATTTTTATATTTGTTTTGGCAAGGGAAAATATAGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGATCACTTATATTTTTATATTTGTTTTGGCAAGGGAAAATATAGAA  550

seq1  ATAAAGGCAAAACTTTCAATTGGGAGGTATATGGCTTTTAGTATAATTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGCAAAACTTTCAATTGGGAGGTATATGGCTTTTAGTATAATTTC  600

seq1  CCATATTGTTCAAATGAAAGAACAATTTATTTTGAATACATAAATAGATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTGTTCAAATGAAAGAACAATTTATTTTGAATACATAAATAGATG  650

seq1  TATATGTACATTACATATATGTAATGAGAATTGATACATATATGACATAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTACATTACATATATGTAATGAGAATTGATACATATATGACATAT  700

seq1  ATATGTGACATATATGTGTATATATGTACACATATACATACATACATACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGACATATATGTGTATATATGTACACATATACATACATACATACA  750

seq1  TACATACATACATACCATACACACACACACACACACAGTGAGAATTC  796
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACATACATACCATACACACACACACACACACAGTGAGAATTC  797

seq1: chr12_71247984_71248303
seq2: B6Ng01-076E18.g_74_393

seq1  TTGCTAACCTTGCTTGCATCTCTGCCTTTGTCACTGTCCTCTTTGCTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAACCTTGCTTGCATCTCTGCCTTTGTCACTGTCCTCTTTGCTGGG  50

seq1  TCTAACCTTCTCACCTCTGCATTAACACCAGACAGCTTACACTGTTGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCTTCTCACCTCTGCATTAACACCAGACAGCTTACACTGTTGGAT  100

seq1  GGCTCTGTAGAGGAATGGAGGTGGGCCAGAGTTCTGTGAGGGACATTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGTAGAGGAATGGAGGTGGGCCAGAGTTCTGTGAGGGACATTTGG  150

seq1  GTCTACAGGATAAATATTGTTTAACTTCTTAGAGGGTCGACCTTATTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACAGGATAAATATTGTTTAACTTCTTAGAGGGTCGACCTTATTCAA  200

seq1  AGTTGGGACATAGTTCTAGAAAAGCAAGCAATGATGGTATAAGGTGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGACATAGTTCTAGAAAAGCAAGCAATGATGGTATAAGGTGGATT  250

seq1  AGTTGGGAGTAAGTTTGGCTATAAGTAGAGAGAAAGAAGAAGAAGAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGAGTAAGTTTGGCTATAAGTAGAGAGAAAGAAGAAGAAGAGGAG  300

seq1  GAGGGAGAAGAAGAGGAGGA  320
      ||||||||||||||||||||
seq2  GAGGGAGAAGAAGAGGAGGA  320