BAC Information

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BAC

Clone NameB6Ng01-076I16
Chromosome12 (Build37)
Map Location 44,966,433 - 44,967,490
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039059, ENSMUSG00000066507
Downstream geneLOC100039081, LOC664854, Dnajb9, LOC100039062, Pnpla8, Nrcam, EG620025, Stxbp6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076I16.bB6Ng01-076I16.g
ACCDH892782DH892783
length1,0061,057
definitionDH892782|Mus musculus domesticus DNA, BAC clone: B6Ng01-076I16, 5' end.DH892783|Mus musculus domesticus DNA, BAC clone: B6Ng01-076I16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctatccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggaccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtagctaatggatggatacatgggtcccaatg
ggaggaagctatagaaagtacccaaggagcttatgggatcttcacctctt
agaggg
gaattcccatggtgcttgcctttgaaatatctcagaaaattagatatttt
tggttgcattttcagttatcttcctggcaagacacctacacatatttgtc
atcagtgagctgataagcatttaaaacagctactaaaattctcagctatg
aggacacatattatatgaactccagatttgaatatatgtaagaatattag
taaatttagtgactaagattgtatagcacaagaatataaagttaaatcag
tgaaaatgtataaacattcttgggaaaatctaatgtatttagtaataact
tgacaaaactcatgtttccaattacttggaaaggaaaagaatattcaata
atggtagtttagcagttgattaataaattcattgagcaaggatgaagatt
tgtctttttcttatattctatgccaaaatgagtgcttaaatataagaaca
aaatgaaagaaattgaagagaattcatagtttcatagattctgtaaagtc
atttttgagaagagcgtcacattccaggaagacattatgaagacagcagg
tagagtttagtgtaaaaggaaacctttctaaaaccattgtgaaataaaaa
tataaaaatgagcaggaatttagtaaagtagatgaaaggaaggcaaagtt
tcatgaattgatgagtaagttataaaaaattcttaaaaatacacactgta
ttgaaaagggggcaaaatacttaaggaagtttctataaataataactaaa
taaatatacaaataaataaaatgcccccaagccaatgaccttaggtgaat
gaatccaactttgctggccaaagaaatgacaattaaaacagtaagtacca
tcttccccaccacatttatatctaaatatatttgctggggctttaatttt
cttggcggataattgctctgattgtaaaataaagattcattttaatgaat
ataggtatctatgtgtttagcctggtgtactagtgttaacatttttcttg
ataagcaaataagttcataagaaatttaaacagttcccttggggggaaaa
aatggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_44966433_44967490
seq2: B6Ng01-076I16.g_69_1125 (reverse)

seq1  TTCCTTTTTTTCCCCCCAAGGG-ACTGTTTAATTTACTTATGAACTTATT  49
      |||| ||||||||||||||||| ||||||||| || ||||||||||||||
seq2  TTCCATTTTTTCCCCCCAAGGGAACTGTTTAAATTTCTTATGAACTTATT  50

seq1  TGCTTATCAAG-AAAATGTTAACACTAGGTACA-CAGGCTAAACACAATA  97
      ||||||||||| ||||||||||||||| ||||| |||||||||||| |||
seq2  TGCTTATCAAGAAAAATGTTAACACTA-GTACACCAGGCTAAACAC-ATA  98

seq1  GATACCTATATTCATTAAAATGAATCTTTATTTTTACAATCAGAGCAATT  147
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GATACCTATATTCATTAAAATGAATCTTTA-TTTTACAATCAGAGCAATT  147

seq1  ATCCGCCAAGAAAATTAAAGCCCCAGCAAATATATTTAAGATATAAATGT  197
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATCCGCCAAGAAAATTAAAGCCCCAGCAAATATATTT-AGATATAAATGT  196

seq1  GGTGGGGAAGATGGTACTTACTGTTTTAATTGTCATTTCTTTGGCCAGCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGAAGATGGTACTTACTGTTTTAATTGTCATTTCTTTGGCCAGCA  246

seq1  AAGTTGGATTCATTCACCTAAGGTCATTGGCTTGGGGGCATTTTATTTAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGATTCATTCACCTAAGGTCATTGGCTTGGGGGCATTTTATTTAT  296

seq1  TTGTATATTTATTTAGTTATTATTTATAGAAACTTCCTTAAGTATTTTGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATATTTATTTAGTTATTATTTATAGAAACTTCCTTAAGTATTTTGC  346

seq1  CCCCTTTTCAATACAGTGTGTATTTTTAAGAATTTTTTATAACTTACTCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTTCAATACAGTGTGTATTTTTAAGAATTTTTTATAACTTACTCA  396

seq1  TCAATTCATGAAACTTTGCCTTCCTTTCATCTACTTTACTAAATTCCTGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCATGAAACTTTGCCTTCCTTTCATCTACTTTACTAAATTCCTGC  446

seq1  TCATTTTTATATTTTTATTTCACAATGGTTTTAGAAAGGTTTCCTTTTAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTATATTTTTATTTCACAATGGTTTTAGAAAGGTTTCCTTTTAC  496

seq1  ACTAAACTCTACCTGCTGTCTTCATAATGTCTTCCTGGAATGTGACGCTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACTCTACCTGCTGTCTTCATAATGTCTTCCTGGAATGTGACGCTC  546

seq1  TTCTCAAAAATGACTTTACAGAATCTATGAAACTATGAATTCTCTTCAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAAAATGACTTTACAGAATCTATGAAACTATGAATTCTCTTCAAT  596

seq1  TTCTTTCATTTTGTTCTTATATTTAAGCACTCATTTTGGCATAGAATATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCATTTTGTTCTTATATTTAAGCACTCATTTTGGCATAGAATATA  646

seq1  AGAAAAAGACAAATCTTCATCCTTGCTCAATGAATTTATTAATCAACTGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGACAAATCTTCATCCTTGCTCAATGAATTTATTAATCAACTGC  696

seq1  TAAACTACCATTATTGAATATTCTTTTCCTTTCCAAGTAATTGGAAACAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTACCATTATTGAATATTCTTTTCCTTTCCAAGTAATTGGAAACAT  746

seq1  GAGTTTTGTCAAGTTATTACTAAATACATTAGATTTTCCCAAGAATGTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTGTCAAGTTATTACTAAATACATTAGATTTTCCCAAGAATGTTT  796

seq1  ATACATTTTCACTGATTTAACTTTATATTCTTGTGCTATACAATCTTAGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTTCACTGATTTAACTTTATATTCTTGTGCTATACAATCTTAGT  846

seq1  CACTAAATTTACTAATATTCTTACATATATTCAAATCTGGAGTTCATATA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAATTTACTAATATTCTTACATATATTCAAATCTGGAGTTCATATA  896

seq1  ATATGTGTCCTCATAGCTGAGAATTTTAGTAGCTGTTTTAAATGCTTATC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGTCCTCATAGCTGAGAATTTTAGTAGCTGTTTTAAATGCTTATC  946

seq1  AGCTCACTGATGACAAATATGTGTAGGTGTCTTGCCAGGAAGATAACTGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACTGATGACAAATATGTGTAGGTGTCTTGCCAGGAAGATAACTGA  996

seq1  AAATGCAACCAAAAATATCTAATTTTCTGAGATATTTCAAAGGCAAGCAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAACCAAAAATATCTAATTTTCTGAGATATTTCAAAGGCAAGCAC  1046

seq1  CATGGGAATTC  1058
      |||||||||||
seq2  CATGGGAATTC  1057