BAC Information

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BAC

Clone NameB6Ng01-077H13
Chromosome12 (Build37)
Map Location 59,772,613 - 59,773,238
singlet/doubletsinglet
Overlap genenone
Upstream geneSstr1, Clec14a
Downstream geneLOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33, LOC665628, LOC238199, LOC665639, LOC665644
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077H13.bB6Ng01-077H13.g
ACCDH893434DH893435
length1,217980
definitionDH893434|Mus musculus domesticus DNA, BAC clone: B6Ng01-077H13, 5' end.DH893435|Mus musculus domesticus DNA, BAC clone: B6Ng01-077H13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttgaatcttg
tcaaatgctttttctgcatttaacgacatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcattcttggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcaagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgagt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgactcaactt
tggtacctggtatctgtacagaaatttgtttatttcatccaggttttcca
gttttgttgagtataaccttttgtagaaggatctgatggtgttttggatt
tcttcaagatctgttgttatgtctcccttttcttttctgattttgttaat
taggatttttgtccctgtgccctctagtgagtctagctaagggtttatct
atcttgttgattttctcaaagaaccaactcctcgtttggttaattctttg
aatagttcttcttgtttccacttggttgatttcacccctgagtttgatta
tttcctgctgtctactcctcttgggtgaatttgcttcctttttttctaga
gcttttagatgtgttgtcagctgctagtattgctctctcccgtttcttct
tggaggcactcagagctattgagtttcctcttagaaagctttccattggt
gtcccaaaggtttgggtacgtgtgcttcttttcattaaaatctaacaagt
ctttaatttctttcttattcctcctgaccaagtatcatggaagaagggtg
tgtcagtttccacgtgaaggtgctcctatttattgtatttgagacacgcc
taggctggctcgataagaactcattcgggatcatcaaattgattactgtg
tgaggcgtgctggagtc
gaattcagacactcccaggctccaggtatctctgtgatgatttgatttag
tgtcctttggacaatacccaagagtcatatggctggaccatgtaagagtt
ttattttcaattgattgaaaactaatttcccccatggctatacaaattca
cattcctatcagcagtaaataaagattgttcttctcccacgtcctcacca
gcatttgtttttatttgtttcatatatgtttctaggctaaatggagagcg
atggaagatcaaagcagtcttaatttgtgtgcccctggtaacttaggatg
tggaacaccttctcaagtttttattggctatctttgtttattattttgag
aggtatctagtcagttcaggaaccattttattggttgaatggtttgggtt
tgggaagtttaggtttcaccgttttttttatataacctagaaatgattcc
ctggcctgggagttaattagtgaagatacatttaccaatcagtactgcct
ccttactccactgactatttccttcactatgaaaaacctttctgctttcc
tgcactcccatattttaatgcttgtaattatttcttgtgcttttagtata
aaaaaattcagaaaatctttggctatgcctatgtcttcaactgtcttccc
tgtttctctgaaacactttcaaagttttaggacctagattcaggcctttg
atccattttgcattgattttctgtgcaggatgaaagagataaatctagtt
ttcattcttctatgtttggaaatttggttttcgcagcaccatttgttgaa
gaggctgtctttttcctctgtgcatggtttgatacatctgccaaagctta
ggtgattcactcaagtttatagaagcttcaaaccaaataccagagaattt
gctgtgtacatctcatctagaaatgctgcttaaagcaggcagtggtggca
catgccttgattccagcacttgggaggcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_59772613_59773238
seq2: B6Ng01-077H13.g_430_1050

seq1  GTCAGTTCAGGAACCATTTTATTGGTTGAATGGTTTGGGTTTGGGAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTTCAGGAACCATTTTATTGGTTGAATGGTTTGGGTTTGGGAAGTT  50

seq1  TAGGTTTCACCGTTTTTTTTATATAACCTAGAAATGATTCCCTGGCCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTCACCGTTTTTTTTATATAACCTAGAAATGATTCCCTGGCCTGG  100

seq1  GAGTTAATTAGTGAAGATACATTTACCAATCAGTACTGCCTCCTTACTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAATTAGTGAAGATACATTTACCAATCAGTACTGCCTCCTTACTCC  150

seq1  ACTGACTATTTCCTTCACTATGAAAAACCTTTCTGCTTTCCTGCACTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACTATTTCCTTCACTATGAAAAACCTTTCTGCTTTCCTGCACTCCC  200

seq1  ATATTTTAATGCTTGTAATTATTTCTTGTGCTTTTAGTATAAAAAAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTAATGCTTGTAATTATTTCTTGTGCTTTTAGTATAAAAAAATTC  250

seq1  AGAAAATCTTTGGCTATGCCTATGTCTTCAACTGTCTTCCCTGTTTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATCTTTGGCTATGCCTATGTCTTCAACTGTCTTCCCTGTTTCTCT  300

seq1  GAAACACTTTCAAAGTTTTAGGACCTAGATTCAGGCCTTTGATCCATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACTTTCAAAGTTTTAGGACCTAGATTCAGGCCTTTGATCCATTTT  350

seq1  GCATTGA-TTTCTGTGCAGGATGAAAGAGATAAATCTAG-TTTCATTCTT  398
      ||||||| ||||||||||||||||||||||||||||||| ||||||||||
seq2  GCATTGATTTTCTGTGCAGGATGAAAGAGATAAATCTAGTTTTCATTCTT  400

seq1  CTATGTTTGGAAATTTGGTTTTCGCAGCACCATTTGTTGAAGAGGCTGTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTTGGAAATTTGGTTTTCGCAGCACCATTTGTTGAAGAGGCTGTC  450

seq1  -TTTTCCTCTGTGCATGGTTTTGATACATCTGCCAAAGCTTAGGTGATTC  497
       ||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTTTCCTCTGTGCATGG-TTTGATACATCTGCCAAAGCTTAGGTGATTC  499

seq1  ACTCAAGTTTATAGAAGCTTCAAAACCAAAATACCAGAGAATTTGCTGTG  547
      ||||||||||||||||||||||||  | ||||||||||||||||||||||
seq2  ACTCAAGTTTATAGAAGCTTCAAA--CCAAATACCAGAGAATTTGCTGTG  547

seq1  GAACAACCTCATCTAGAAATGGCTGCATAAAGCAGGGCAGTGGTGGCACA  597
       |   | ||||||||||||| ||||| ||||||| |||||||||||||||
seq2  TA--CATCTCATCTAGAAAT-GCTGCTTAAAGCA-GGCAGTGGTGGCACA  593

seq1  TGCCTTTGATCCCAGCACTTGGGAGGCAG  626
      |||| ||||| ||||||||||||||||||
seq2  TGCC-TTGATTCCAGCACTTGGGAGGCAG  621