BAC Information

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BAC

Clone NameB6Ng01-078G14
Chromosome12 (Build37)
Map Location 14,045,003 - 14,166,485
singlet/doubletdoublet
Overlap geneAW125753
Upstream geneLOC628449, Ddx1, LOC627199, LOC627189, LOC100043243, LOC100042396, LOC238091, EG633789, LOC668481
Downstream geneLOC100043256, Map1lc3-ps7, LOC668492, LOC100042426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078G14.bB6Ng01-078G14.g
ACCDH894116DH894117
length8991,014
definitionDH894116|Mus musculus domesticus DNA, BAC clone: B6Ng01-078G14, 5' end.DH894117|Mus musculus domesticus DNA, BAC clone: B6Ng01-078G14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,045,003 - 14,045,899)(14,165,459 - 14,166,485)
sequence
gaattcagcatgcataaccttagataaccgccactatgctttccagaaat
tatggaaccagatagcatttccttaaagaatctacagcttgttttctatg
gctctttatattgtagatttttctcatttctaattaacctttgcacccca
actgcctaggacaatgacagtggcatactttagacaatcaatgattgaat
gaataaaaggttgaagactcttgtgagatgaaaatttcccttttaaaaaa
ttttaatttggtttaatttgttatgagttaacatgatctcttctttaaaa
aaaatttggagttgaaaaatagtgattttctttcttcttgaaattaaata
ttgaaaggaggcctgtagcaaagtcttcagtattagtatgtcaagatcat
tatctgttctctgagatcatgttcaggggcctaaaataaagtctcttaag
ctgtgtgctccagcctctgcctttattgtcccattgcccaggcacttttg
tcccatctgtcttttctgattctatgtagttgtttttaacattcaccaac
tgacaaaccaagtaagccatgcttagtttgttatgtgacttctctactgg
gagttttgtttgtagctcactagcttgtttttttccatagacaacgggat
gacagtgtgtggctctccacagtttctgatacctgggatacagtgctagc
ttagtactgaaggatgtgacttctctaatctggaaagagccagatacagt
agctcatgcctgcagtgttagcattttaaaaagtagagacaggagtatga
ggaggctatcctcagctacataagtctgagactagcctgggctatatgtc
accctgtctaaaagaaggaaggaaggaaggaggaaggatgaatgaagga
gaattcttaatacttaccaaagtcattcttctgatacagacacggtacta
aataaatgaatatattctcacatttaatattgatcaaaggctcctatgga
aggatattattctctgtatttcataggtaagatgaattaggaatttagct
gggcatggtagcgcatgcctttaattccagcacttgggaggcagaggcag
gcagatttctgagttcgagtccagcctgatctacagagtgagttccagga
cagccagggctacacaaagaaaccctgtcttgaaaataaaaaaatcggaa
tcaggtatctcatgcaatgttatacaatgtcaggtagcaggaccacagct
tgaaactgtgtatggtaaagtagagcctttgtgctaaagccagtttgtga
ttaaaaaaaaaaaaaaaaaaaaagcaagctctgatgtttggatctaaggc
aaagacacagacaccagtaaaattaagagaacatcactactagaggaatg
atggagcaagaacaagaagacatgtatgaattcagctgcttgactttggt
gatgtagacataggcttaaatatgtgtttgtaggagtagttgctaagtat
atgtttttaaatagaaactatattaactatgtgctgtctctggatagagt
catacttttgacatcttgaaagcatataaatatatcattatgtgaaagat
aaatgttaagcaagaaacaaatcatcattggggagttaaaaaaaatatcc
cgtggcacaagaaaacaacaggatgaacaagtaaagcaccatccggcagc
ccctactttctttgctgttttagaataaccacttatccgcctttgtttag
cattaaagtgtctctgccaataactaatgcagttattaatgtctgccaga
gattccttacttctgtggcttagattttaaggaagtagttcaggcaggta
gtgggaagaaagggagttgagtgcgacatgaagggtgagcagaagaaggg
agaagagtaagtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_14045003_14045899
seq2: B6Ng01-078G14.b_34_932

seq1  GAATTCAGCATGCATAACCTTAGATAA-AGCCACTATGCTTTCCAGAAAT  49
      |||||||||||||||||||||||||||  |||||||||||||||||||||
seq2  GAATTCAGCATGCATAACCTTAGATAACCGCCACTATGCTTTCCAGAAAT  50

seq1  TATGGAACCAGATAGCATTTCCTTAAAGAATCTACAGCTTGTTTTCTATG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAACCAGATAGCATTTCCTTAAAGAATCTACAGCTTGTTTTCTATG  100

seq1  GCTCTTTATATTGTAGATTTTTCTCATTTCTAATTAACCTTTGCACCCCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTATATTGTAGATTTTTCTCATTTCTAATTAACCTTTGCACCCCA  150

seq1  ACTGCCTAGGACAATGACAGTGGCATACTTTAGACAATCAATGATTGAAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTAGGACAATGACAGTGGCATACTTTAGACAATCAATGATTGAAT  200

seq1  GAATAAAAGGTTGAAGACTCTTGTGAGATGAAAATTTCCCTTTTAAAAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAAGGTTGAAGACTCTTGTGAGATGAAAATTTCCCTTTTAAAAAA  250

seq1  TTTTAATTTGGTTTAATTTGTTATGAGTTAACATGATCTCTTCTTTAAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTTGGTTTAATTTGTTATGAGTTAACATGATCTCTTCTTTAAAA  300

seq1  AAAATTTGGAGTTGAAAAATAGTGATTTTCTTTCTTCTTGAAATTAAATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTGGAGTTGAAAAATAGTGATTTTCTTTCTTCTTGAAATTAAATA  350

seq1  TTGAAAGGAGGCCTGTAGCAAAGTCTTCAGTATTAGTATGTCAAGATCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGGAGGCCTGTAGCAAAGTCTTCAGTATTAGTATGTCAAGATCAT  400

seq1  TATCTGTTCTCTGAGATCATGTTCAGGGGCCTAAAATAAAGTCTCTTAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTTCTCTGAGATCATGTTCAGGGGCCTAAAATAAAGTCTCTTAAG  450

seq1  CTGTGTGCTCCAGCCTCTGCCTTTATTGTCCCATTGCCCAGGCACTTTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGCTCCAGCCTCTGCCTTTATTGTCCCATTGCCCAGGCACTTTTG  500

seq1  TCCCATCTGTCTTTTCTGATTCTATGTAGTTGTTTTTAACATTCACCAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCTGTCTTTTCTGATTCTATGTAGTTGTTTTTAACATTCACCAAC  550

seq1  TGACAAACCAAGTAAGCCATGCTTAGTTTGTTATGTGACTTCTCTACTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAACCAAGTAAGCCATGCTTAGTTTGTTATGTGACTTCTCTACTGG  600

seq1  GAGTTTTGTTTGTAGCTCACTAGCTTGTTTTTTTCCATAGACAACGGGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTGTTTGTAGCTCACTAGCTTGTTTTTTTCCATAGACAACGGGAT  650

seq1  GACAGTGTGTGGCTCTCCACAGTTTCTGATACCTGGGATACAGTGCTAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTGTGTGGCTCTCCACAGTTTCTGATACCTGGGATACAGTGCTAGC  700

seq1  TTAGTACTGAAGGATGTGACTTCTCTAATCTGGAAAGAGCCAGATACAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTACTGAAGGATGTGACTTCTCTAATCTGGAAAGAGCCAGATACAGT  750

seq1  AGCTCATGCCTGCAGTGTTAGCA-TTTAAAAAGTAGAGACAGGAGTATGA  798
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGCTCATGCCTGCAGTGTTAGCATTTTAAAAAGTAGAGACAGGAGTATGA  800

seq1  GGAGGCTATCCTCAGCTACATAAGTCTGAGACTAGCCTGGGCTATATGTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTATCCTCAGCTACATAAGTCTGAGACTAGCCTGGGCTATATGTC  850

seq1  ACCCTGTCTAAA--AAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG  896
      ||||||||||||  ||| |||||||||||| ||||||| | ||| |||||
seq2  ACCCTGTCTAAAAGAAGGAAGGAAGGAAGG-AGGAAGG-ATGAATGAAGG  898

seq1  A  897
      |
seq2  A  899

seq1: chr12_14165459_14166485
seq2: B6Ng01-078G14.g_71_1084 (reverse)

seq1  CTACTT-CTTTTCTTCCCCTTCTCTCCTTGCTCACCCCTCTCCATGTCGC  49
      |||||| || ||||  ||||||| ||  ||||||||   || ||||||||
seq2  CTACTTACTCTTCT--CCCTTCT-TC--TGCTCACC---CTTCATGTCGC  42

seq1  ACTTCAACTTCCCTTTTCCTTTCCCACTCCCTGCCCTGAACTTACTTCCT  99
      || ||||| |||||||    |||||||| |||| ||||||| ||||||| 
seq2  AC-TCAAC-TCCCTTT---CTTCCCACTACCTG-CCTGAAC-TACTTCC-  84

seq1  TTAAAATCTAAGCCACAG-AGTAGGGAATCTCTGGCAGACATTAATAACT  148
      |||||||||||||||||| |||| ||||||||||||||||||||||||||
seq2  TTAAAATCTAAGCCACAGAAGTAAGGAATCTCTGGCAGACATTAATAACT  134

seq1  GCATTAGTTATTGGCAGAGACACTTTAATGCTAAACAAAGGCGGATAAGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAGTTATTGGCAGAGACACTTTAATGCTAAACAAAGGCGGATAAGT  184

seq1  GGTTATTCTAAAACAGCAAAGAAAGTAGGGGCTGCCGGATGGTGCTTTAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTCTAAAACAGCAAAGAAAGTAGGGGCTGCCGGATGGTGCTTTAC  234

seq1  TTGTTCATCCTGTTGTTTTCTTGTGCCACGGGATATTTTTTTTAACTCCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCATCCTGTTGTTTTCTTGTGCCACGGGATATTTTTTTTAACTCCC  284

seq1  C-ATGATGATTTGTTTCTTGCTTAACATTTATCTTTCACATAATGATATA  347
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATGATTTGTTTCTTGCTTAACATTTATCTTTCACATAATGATATA  334

seq1  TTTATATGCTTTCAAGATGTCAAAAGTATGACTCTATCCAGAGACAGCAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATGCTTTCAAGATGTCAAAAGTATGACTCTATCCAGAGACAGCAC  384

seq1  ATAGTTAATATAGTTTCTATTTAAAAACATATACTTAGCAACTACTCCTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTAATATAGTTTCTATTTAAAAACATATACTTAGCAACTACTCCTA  434

seq1  CAAACACATATTTAAGCCTATGTCTACATCACCAAAGTCAAGCAGCTGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACATATTTAAGCCTATGTCTACATCACCAAAGTCAAGCAGCTGAA  484

seq1  TTCATACATGTCTTCTTGTTCTTGCTCCATCATTCCTCTAGTAGTGATGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACATGTCTTCTTGTTCTTGCTCCATCATTCCTCTAGTAGTGATGT  534

seq1  TCTCTTAATTTTACTGGTGTCTGTGTCTTTGCCTTAGATCCAAACATCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAATTTTACTGGTGTCTGTGTCTTTGCCTTAGATCCAAACATCAG  584

seq1  AGCTTGCTTTTTTTTTTTTTTTTTTTTTAATCACAAACTGGCTTTAGCAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCTTTTTTTTTTTTTTTTTTTTTAATCACAAACTGGCTTTAGCAC  634

seq1  AAAGGCTCTACTTTACCATACACAGTTTCAAGCTGTGGTCCTGCTACCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTCTACTTTACCATACACAGTTTCAAGCTGTGGTCCTGCTACCTG  684

seq1  ACATTGTATAACATTGCATGAGATACCTGATTCCGATTTTTTTATTTTCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTATAACATTGCATGAGATACCTGATTCCGATTTTTTTATTTTCA  734

seq1  AGACAGGGTTTCTTTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGGTTTCTTTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAG  784

seq1  ATCAGGCTGGACTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGCTGGACTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTG  834

seq1  CTGGAATTAAAGGCATGCGCTACCATGCCCAGCTAAATTCCTAATTCATC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATTAAAGGCATGCGCTACCATGCCCAGCTAAATTCCTAATTCATC  884

seq1  TTACCTATGAAATACAGAGAATAATATCCTTCCATAGGAGCCTTTGATCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATGAAATACAGAGAATAATATCCTTCCATAGGAGCCTTTGATCA  934

seq1  ATATTAAATGTGAGAATATATTCATTTATTTAGTACCGTGTCTGTATCAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAATGTGAGAATATATTCATTTATTTAGTACCGTGTCTGTATCAG  984

seq1  AAGAATGACTTTGGTAAGTATTAAGAATTC  1027
      ||||||||||||||||||||||||||||||
seq2  AAGAATGACTTTGGTAAGTATTAAGAATTC  1014