BAC Information

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BAC

Clone NameB6Ng01-078N24
Chromosome12 (Build37)
Map Location 50,600,870 - 50,601,430
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1818, GA_x5J8B7W54VK-284379-285078, Olfr1399-ps1, EG665036, LOC100039366, Foxg1, ENSMUSG00000045946, LOC100039424
Downstream geneLOC665071, LOC665077, LOC100039455, Prkcm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078N24.bB6Ng01-078N24.g
ACCDH894456DH894457
length5551,202
definitionDH894456|Mus musculus domesticus DNA, BAC clone: B6Ng01-078N24, 5' end.DH894457|Mus musculus domesticus DNA, BAC clone: B6Ng01-078N24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ctgaatacctgggtgccttcttttatgtacttgtcatgagtttgggatgg
gtatgtgaaaaaaaaatctgaatgagaaactgctagatcttttcctggtt
ctaacctcaaaaattaaaccccatgaagaagccaggatttgctattccta
acttctgctctgaagagatcatgctgggaacatgtactaccctaagaaag
aaatgtaagcagactgccagtgcctagcaaatacagaagtggatgctcac
aatcatccattggatggagcacacggtccccagtgaaggagccagagaaa
gtacccaaggagttgaagaggtttgaagccccataggaggaacatcaata
tgatctaacctgtgcccccagagctccttggaactaaagcaccaatcaaa
gaaaatacatggtggaacttgtggctctagctgcatatgtagcagaggat
ggcctagtcggttatcaatgggagaagagaccctaggtcctgtgaaggtt
caatgccccagtataggggaatgccaagacaagaaagtgggagtgggggg
gggtt
gaattccatgaaaatgaaggtacaatatacccaaacttacaggacacaat
gaaagaagtgctttttaggtatgttcatagcactgtcttcataaagatat
tggagagattttatactagcaatttaaaggcacacctaaaagctctagaa
caaaaagaagtaaacacacccatgaagagtagatgtcagaaaataatcaa
acttagtgctgaaatcaaccaattagaaaaaaaaaatagaacaagacaaa
taaattaaagaacaggtcttaggagaaaatcaacaagataagtaagcctg
gcctaaacaaactaaaaagcaaagagaatatatcccaattaacaaagtta
gaaatgaaaagggggacataaaaacagctactgagaaaattcaaagaatt
attgggccttgctttgaaagcctgtactcgacaaaactgggaaatgtaaa
tgaaatggacaactttcttgagagattccacttatgaaagttaaatccag
atcaagtaaacaatttaaatggtgctaagggaatagaagcattcaacatt
cttccaaccaaaaaaatcccaggtccagagggttttagtacaagatttta
ccagaccttccacaaagggctaacaccaatactcctcaaactattccaca
aaatgaaacaaaggggattattccaaactgattatataaggtcatagtca
ccatgatacctaaaccacacaaagactcaacaaagaaaaagaatgtcagc
tcagtttctcttaaaaacactgatgcaatagtattcaatacaatactcag
aaaccaagtccaagaacatatcaaaatgccattcaacaagatcaagtata
agttatcacagggatgtaaggattgcttaacatatgaaaatttatcaatg
taatccaccatataaacaaatgaaagaaaaaaacacacatgaaacatctc
attagatgctaaagaagccttgataaaacccaacacccatcatgactaaa
gtcttagagagatcagtaatacaaggtcaattactagcataataaacgca
tatttaacagccaatagccatattcaattaataagatagactagtgtatc
tctaacagagacacttgactgtgacacttctctcttgactcagaagtact
caggtatagatcctcagagtctgaagccaattagacacaacctcagggcg
at
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_50600870_50601430
seq2: B6Ng01-078N24.b_48_608

seq1  GAATTCCTGAATACCTGGGTGCCTTCTTTTATGTACTTGTCATGAGTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAATACCTGGGTGCCTTCTTTTATGTACTTGTCATGAGTTTG  50

seq1  GGATGGGTATGTGAAAAAAAAATCTGAATGAGAAACTGCTAGATCTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGGTATGTGAAAAAAAAATCTGAATGAGAAACTGCTAGATCTTTTC  100

seq1  CTGGTTCTAACCTCAAAAATTAAACCCCATGAAGAAGCCAGGATTTGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTCTAACCTCAAAAATTAAACCCCATGAAGAAGCCAGGATTTGCTA  150

seq1  TTCCTAACTTCTGCTCTGAAGAGATCATGCTGGGAACATGTACTACCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAACTTCTGCTCTGAAGAGATCATGCTGGGAACATGTACTACCCTA  200

seq1  AGAAAGAAATGTAAGCAGACTGCCAGTGCCTAGCAAATACAGAAGTGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAATGTAAGCAGACTGCCAGTGCCTAGCAAATACAGAAGTGGAT  250

seq1  GCTCACAATCATCCATTGGATGGAGCACACGGTCCCCAGTGAAGGAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACAATCATCCATTGGATGGAGCACACGGTCCCCAGTGAAGGAGCCA  300

seq1  GAGAAAGTACCCAAGGAGTTGAAGAGGTTTGAAGCCCCATAGGAGGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGTACCCAAGGAGTTGAAGAGGTTTGAAGCCCCATAGGAGGAACA  350

seq1  TCAATATGATCTAACCTGTGCCCCCAGAGCTCCTTGGAACTAAAGCACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATGATCTAACCTGTGCCCCCAGAGCTCCTTGGAACTAAAGCACCA  400

seq1  ATCAAAGAAAATACATGGTGGAACTTGTGGCTCTAGCTGCATATGTAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGAAAATACATGGTGGAACTTGTGGCTCTAGCTGCATATGTAGCA  450

seq1  GAGGATGGCCTAGTCGGTTATCAATGGGAGAAGAGACCCTAGGTCCTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGGCCTAGTCGGTTATCAATGGGAGAAGAGACCCTAGGTCCTGTG  500

seq1  AAGGTTCAATGCCCCAGTATAGGGGAATGCCAAGACAAGAAAGTGGGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCAATGCCCCAGTATAGGGGAATGCCAAGACAAGAAAGTGGGAGT  550

seq1  GGGGGGGGGTT  561
      |||||||||||
seq2  GGGGGGGGGTT  561