BAC Information

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BAC

Clone NameB6Ng01-079B23
Chromosome12 (Build37)
Map Location 79,173,122 - 79,174,179
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041772, Fut8, LOC230765, LOC666659
Downstream geneEG626215, Gphn, 4921509E07Rik, Mpp5, Atp6v1d, LOC100041878, Eif2s1, Plek2, 6330442E10Rik, Plekhh1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079B23.bB6Ng01-079B23.g
ACCDH894625DH894626
length6701,065
definitionDH894625|Mus musculus domesticus DNA, BAC clone: B6Ng01-079B23, 5' end.DH894626|Mus musculus domesticus DNA, BAC clone: B6Ng01-079B23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttccttgactgttgaaatttttgttatagtgttcatcagagaag
agctgggaggttttttgagcttcaagaatatggatatccctctagagact
ggaggccccagggagtttagaggtctggtggggtggaggtgggaggtggg
gacatcctcatggagacggggcagtaaagaggtatgggttgtggaacagt
tggagggtggactgggagagaaacaaaatctggagtgttaaaaaaaaaga
gtataaatgaaacaaaacaacaaaaaaagaatatagatgaccatgcctcc
cccatgacctgggaatctctcagttattatttatttaacgtcttctgtgc
atttgactttcttttctccctgtagaatttccataaaataaagatttgat
tgcttaattatatcccttaaatataggctttatttactgttttatcatcc
attgtttttggattatttcaaaagacattagaacttaacatttagaaatt
tctttgattttgtttgctagtgatcatcccagttaaatgtatatgaaatt
cattcattgagttcttcagctctaatgtttctacttggttctattttatg
gtgcctctgtgaatttatttgggtaagaattgttttttctgattttttta
acctacctgtttatattctc

gaattcaagccgacctgagctaatcaggtagcatttgtagattgtggctt
tgctttgcgacgctgcacttgactctgggtgtcactttggagtgcttttt
agtgaaccggtttggttggtttaaaatttaaaactttttcagagccattg
atgcctttaaaactcctttcttcagatggtgtagattgaaagagttgaat
gaaatgattttgaagactaatgtcttcttctgatactcaagattaaacta
taatattcccagcttctgaaataatatagacaaatgccgatgtctggcac
ttccattcagacttcggtctcacattgtgttgcttaggataatttttact
tcttagatagacaactgaaagaaagatggcaatagccatcatcttaataa
cagacttgtagtgaggaaaatggagcatgcagatgcttctagtttccatt
tgtctatgacaccctgaacaaaaggaaatgttctcttcagggggaaaaaa
atgagctgctactccatgtcccttcagatcatcacccccaccaacctccc
acttccccaccccgtgtctaatgccactgccaacatcgatttgcattctt
ctacagaaagccaatgtcttaagaggttccaagaattttgttcaagtaaa
tacacaacaaggattttcaatcacttgccacagaaatggagatggatgtt
ttagtgagaatgggtggcgtttagcagtgcacccttgccctaaatgtatg
cacagcctgccacagaggaggttatcttcctgctgcttcaaagatgctcc
atttctactcctttgtcctgctgatggctcgaacaggcttcagcagtcgc
attactgtcatttttgtgctatctcaaagttaaatcgtaatgagctttga
gatttgttagttgttttcttctctttgtttctgcggaaacgaggctccct
ttttcatttttggaggatctggaaccttccagtttctatgattgcctctc
cacggcctcttctttgctcatttcttctcttctttggctcaaagcaaact
cattatcaaaccaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_79173122_79174179
seq2: B6Ng01-079B23.g_69_1133

seq1  GAATTCAAGCCGACCTGAGCTAATCAGGTAGCATTTGTAGATTGTGGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCCGACCTGAGCTAATCAGGTAGCATTTGTAGATTGTGGCTT  50

seq1  TGCTTTGCGACGCTGCACTTGACTCTGGGTGTCACTTTGGAGTGCTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGCGACGCTGCACTTGACTCTGGGTGTCACTTTGGAGTGCTTTTT  100

seq1  AGTGAACCGGTTTGGTTGGTTTAAAATTTAAAACTTTTTCAGAGCCATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACCGGTTTGGTTGGTTTAAAATTTAAAACTTTTTCAGAGCCATTG  150

seq1  ATGCCTTTAAAACTCCTTTCTTCAGATGGTGTAGATTGAAAGAGTTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTTAAAACTCCTTTCTTCAGATGGTGTAGATTGAAAGAGTTGAAT  200

seq1  GAAATGATTTTGAAGACTAATGTCTTCTTCTGATACTCAAGATTAAACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGATTTTGAAGACTAATGTCTTCTTCTGATACTCAAGATTAAACTA  250

seq1  TAATATTCCCAGCTTCTGAAATAATATAGACAAATGCCGATGTCTGGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTCCCAGCTTCTGAAATAATATAGACAAATGCCGATGTCTGGCAC  300

seq1  TTCCATTCAGACTTCGGTCTCACATTGTGTTGCTTAGGATAATTTTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCAGACTTCGGTCTCACATTGTGTTGCTTAGGATAATTTTTACT  350

seq1  TCTTAGATAGACAACTGAAAGAAAGATGGCAATAGCCATCATCTTAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGATAGACAACTGAAAGAAAGATGGCAATAGCCATCATCTTAATAA  400

seq1  CAGACTTGTAGTGAGGAAAATGGAGCATGCAGATGCTTCTAGTTTCCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTGTAGTGAGGAAAATGGAGCATGCAGATGCTTCTAGTTTCCATT  450

seq1  TGTCTATGACACCCTGAACAAAAGGAAATGTTCTCTTCAGGGGGAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATGACACCCTGAACAAAAGGAAATGTTCTCTTCAGGGGGAAAAAA  500

seq1  ATGAGCTGCTACTCCATGTCCCTTCAGATCATCACCCCCACCAACCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTGCTACTCCATGTCCCTTCAGATCATCACCCCCACCAACCTCCC  550

seq1  ACTTCCCCACCCCGTGTCTAATGCCACTGCCAACATCGATTTGCATTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCCACCCCGTGTCTAATGCCACTGCCAACATCGATTTGCATTCTT  600

seq1  CTACAGAAAGCCAATGTCTTAAGAGGTTCCAAGAATTTTGTTCAAGTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAAAGCCAATGTCTTAAGAGGTTCCAAGAATTTTGTTCAAGTAAA  650

seq1  TACACAACAAGGATTTTCAATCACTTGCCACAGAAATGGAGATGGATGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAACAAGGATTTTCAATCACTTGCCACAGAAATGGAGATGGATGTT  700

seq1  TTAGTGAGAATGGGTGGCGTTTAGCAGTGCACCCTTGCCCT-AATGTATG  749
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTAGTGAGAATGGGTGGCGTTTAGCAGTGCACCCTTGCCCTAAATGTATG  750

seq1  CACAGCCTGCCACAGAGGAGGTTATCTTCCTGCTGCTTCAAAGATGCTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCTGCCACAGAGGAGGTTATCTTCCTGCTGCTTCAAAGATGCTCC  800

seq1  ATTTCTACTCCTTTGTCCTGCTGATGGCTCGAACAGGCTTCAGCAGTCGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTACTCCTTTGTCCTGCTGATGGCTCGAACAGGCTTCAGCAGTCGC  850

seq1  ATTACTGTCA-TTTTGTGCTATCTCAAAGTTAAATCGTAATGAGCTTTGA  898
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGTCATTTTTGTGCTATCTCAAAGTTAAATCGTAATGAGCTTTGA  900

seq1  GA-TTGTTAGTTGTTT--CTCTC-TTGTTTCTGCGGAAACGAAGGCTCCC  944
      || |||||||||||||   |||| ||||||||||||||||| ||||||||
seq2  GATTTGTTAGTTGTTTTCTTCTCTTTGTTTCTGCGGAAACG-AGGCTCCC  949

seq1  -TTTTCA-TTTTGGAGGATCT-GAACCTCCAAGTTTCTATGATTGCCTCT  991
       |||||| ||||||||||||| |||||| | |||||||||||||||||||
seq2  TTTTTCATTTTTGGAGGATCTGGAACCTTCCAGTTTCTATGATTGCCTCT  999

seq1  -CAC-GCCTTCTCTTGCTTCATTCTCTTCTCTTCTTTGGCTCAAAAAGCA  1039
       ||| ||||  ||||   ||||| ||||||||||||||||||  ||||||
seq2  CCACGGCCTCTTCTTTGCTCATT-TCTTCTCTTCTTTGGCTC--AAAGCA  1046

seq1  AACTCATTACCAAACCAAA  1058
      ||||||||| |||||||||
seq2  AACTCATTATCAAACCAAA  1065


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