BAC Information

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BAC

Clone NameB6Ng01-079C17
Chromosome12 (Build37)
Map Location 50,468,002 - 50,469,090
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1818, GA_x5J8B7W54VK-284379-285078, Olfr1399-ps1, EG665036
Downstream geneLOC100039366, Foxg1, ENSMUSG00000045946, LOC100039424, LOC665071, LOC665077, LOC100039455, Prkcm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079C17.bB6Ng01-079C17.g
ACCDH894659DH894660
length1,2561,084
definitionDH894659|Mus musculus domesticus DNA, BAC clone: B6Ng01-079C17, 5' end.DH894660|Mus musculus domesticus DNA, BAC clone: B6Ng01-079C17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccacctttttaatgggattatttgat
tttctggagtccaccttcttgagttctttatatatattagatattagtcc
cctatccgatttgggataggtaaagatcctttcccaatctgttggtggcc
tttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttt
atgaggtcccatttatcgattcttgatcttacagcacaagccattgctgt
tctattcaggaatttttcccctgtacccatatcttcaaggcttttcccta
ctttctcctctataagtttcagtgtctctggttttatgtggagttcctta
atccacttagatttgaccttagtacaaggagatagaaatggatcaattcg
cattcttctacatgataaccgccagttgtgccagcaccatttgttgaaaa
tgctgtcttttttccaatggatggttttagctcccttgtcaaagatcaag
tgaccataggtgtgtgagttcatctctgggtcttcaattctgttccattg
gtctacctgtctgtcactataccagtaccatgcagttttgatcacaattg
ctctgtagtacagttttaggtctggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctatcctcggttttttgttattccagat
gaatctgccgattgccctttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctttagattgcttttggcaagatggccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttcaatttctttctttagagacttgaagttcttatcataca
aggtctttcacttccttagtagagtcacgccaaggtattttatatttatt
tgtgactattgagaagggtgttgttcccctaatttctttctcagcctgta
attctttgtgtaagagaaaggccattgacttgtttgaagttaattttgta
tccagctacttcgccgaagcctgtttatcagctaggagttccctggtgaa
tttaagggtcacttaataaataactatcaaatcatctgcaaaaagtgaat
tttggactcttcctttttcagttgtatccttgatcacttgtgttctattg
ctctggcctaggaactcagagtacaagttacataagagacataggatcga
tgaaat
gaattctcttctggcctccacaggcacaaggtatgtatacaggtggagca
tagacatacatgtaatcaaaccacctatacaatgaaattaaaattaataa
agtgttttattgacacattctaaaacatgtcatatgaaaagctaacctga
tacttagactcgtattgagcagaaaggtagggcatatctgcctgctgaaa
gacaactatattaccttcctagttttgcctctgttgccttgataaaaata
atctgattaaaaaaaaacttatgtgagaaatctatttttcttttcaattc
caggtcatagttggtcatcctgaggaagttaagacatcaagaatttgaga
caattacattatatccacagtcaagaacagggagaaaatgaaggttaacc
tacttctcagctctcttctctactctttaggattcaaccccactgcaaca
gtactgccactttcaggctggatgttgccacttcgagtaacatactcaag
attgctgcaacccctgctcactcataaaatctattctatttccctctccc
aggaatattcatgtgctccccactaccagttccttcccctatacctaact
tgtttgcatctacaggttatagcttggttatcatttacttagtggctaat
atacatataagcaaatatgtttcatagttgtctttctgggttacctaact
tgggatgaatttttctagttccatttatctcctgcaatttcatgatttct
ataaaatggttgagtaaaacttcattatttagattgtcctcttcccctta
attattcatctgtcaagggacatctaggttatttccagttcctgattatt
atgaatagaccagcaatgaacatggctgagcaagtgtccctatgatagga
tgacatatcatttaggaatatggccagagtggtatagttgtattttggta
tagatcaatccacatcttttctgaagaattgccacattgatttcatggtg
gcagtacatattttgcattcatgtaggttattttatggaaccctacctag
attggagttgagattcctccagagtctggagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_50468002_50469090
seq2: B6Ng01-079C17.g_71_1154

seq1  GAATTCTCTTCTGGCCTCCACAGGCACAAGGTATGTATACAGGTGGAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTGGCCTCCACAGGCACAAGGTATGTATACAGGTGGAGCA  50

seq1  TAGACATACATGTAATCAAACCACCTATACAATGAAATTAAAATTAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATACATGTAATCAAACCACCTATACAATGAAATTAAAATTAATAA  100

seq1  AGTGTTTTATTGACACATTCTAAAACATGTCATATGAAAAGCTAACCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTATTGACACATTCTAAAACATGTCATATGAAAAGCTAACCTGA  150

seq1  TACTTAGACTCGTATTGAGCAGAAAGGTAGGGCATATCTGCCTGCTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGACTCGTATTGAGCAGAAAGGTAGGGCATATCTGCCTGCTGAAA  200

seq1  GACAACTATATTACCTTCCTAGTTTTGCCTCTGTTGCCTTGATAAAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTATATTACCTTCCTAGTTTTGCCTCTGTTGCCTTGATAAAAATA  250

seq1  ATCTGATTAAAAAAAAACTTATGTGAGAAATCTATTTTTCTTTTCAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATTAAAAAAAAACTTATGTGAGAAATCTATTTTTCTTTTCAATTC  300

seq1  CAGGTCATAGTTGGTCATCCTGAGGAAGTTAAGACATCAAGAATTTGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCATAGTTGGTCATCCTGAGGAAGTTAAGACATCAAGAATTTGAGA  350

seq1  CAATTACATTATATCCACAGTCAAGAACAGGGAGAAAATGAAGGTTAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACATTATATCCACAGTCAAGAACAGGGAGAAAATGAAGGTTAACC  400

seq1  TACTTCTCAGCTCTCTTCTCTACTCTTTAGGATTCAACCCCACTGCAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTCAGCTCTCTTCTCTACTCTTTAGGATTCAACCCCACTGCAACA  450

seq1  GTACTGCCACTTTCAGGCTGGATGTTGCCACTTCGAGTAACATACTCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGCCACTTTCAGGCTGGATGTTGCCACTTCGAGTAACATACTCAAG  500

seq1  ATTGCTGCAACCCCTGCTCACTCATAAAATCTATTCTATTTCCCTCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGCAACCCCTGCTCACTCATAAAATCTATTCTATTTCCCTCTCCC  550

seq1  AGGAATATTCATGTGCTCCCCACTACCAGTTCCTTCCCCTATACCTAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATATTCATGTGCTCCCCACTACCAGTTCCTTCCCCTATACCTAACT  600

seq1  TGTTTGCATCTACAGGTTATAGCTTGGTTATCATTTACTTAGTGGCTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCATCTACAGGTTATAGCTTGGTTATCATTTACTTAGTGGCTAAT  650

seq1  ATACATATAAGCAAATATGTTTCATAGTTGTCTTTCTGGGTTACCTAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATAAGCAAATATGTTTCATAGTTGTCTTTCTGGGTTACCTAACT  700

seq1  TGGGATGAATTTTTCTAGTTCCATTTATCTCCTGCAAATTTCATGATTTC  750
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGGGATGAATTTTTCTAGTTCCATTTATCTCCTGC-AATTTCATGATTTC  749

seq1  TATAAAATGGTTGAGTAAAACTTCATTATTTAGATTGTCCTCTTCCCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATGGTTGAGTAAAACTTCATTATTTAGATTGTCCTCTTCCCCTT  799

seq1  AATTATTCATCTGTCAAGGGACATCTAGGTTATTTCCAGTTCCTGATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTCATCTGTCAAGGGACATCTAGGTTATTTCCAGTTCCTGATTAT  849

seq1  TATGAATAGACCAGCAATGAACATGGCTGAGCAAGTGTCCCTATGATAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATAGACCAGCAATGAACATGGCTGAGCAAGTGTCCCTATGATAGG  899

seq1  ATGACATATCATTTAGGAATATGGCCAAGAGTGGTATAGTTGTATTTTGG  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATGACATATCATTTAGGAATATGGCC-AGAGTGGTATAGTTGTATTTTGG  948

seq1  TATAGATCAATCCACATC-TTTCTGAAGAATTGCCACATTGATTTTCATG  999
      |||||||||||||||||| ||||||||||||||||||||||| |||||||
seq2  TATAGATCAATCCACATCTTTTCTGAAGAATTGCCACATTGA-TTTCATG  997

seq1  GTGGCAGTACATA-TTTGCATTCATGTAGGGTTTATTTTATGGAACCCTA  1048
      ||||||||||||| ||||||||||||||||  ||||||||||||||||||
seq2  GTGGCAGTACATATTTTGCATTCATGTAGG--TTATTTTATGGAACCCTA  1045

seq1  CCTAGA-TGGAGTTGAAGATTCTCTCCAGAGGTCTGGAGAGA  1089
      |||||| |||||||| |||||| ||||||| |||||||||||
seq2  CCTAGATTGGAGTTG-AGATTC-CTCCAGA-GTCTGGAGAGA  1084