BAC Information

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BAC

Clone NameB6Ng01-079G24
Chromosome12 (Build37)
Map Location 31,970,241 - 32,073,351
singlet/doubletdoublet
Overlap geneLamb1-1, Dld
Upstream geneSntg2, Tmem18, LOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik, LOC668781, LOC100043065, LOC100043514, EG629667, LOC100043068
Downstream geneLOC668786, Slc26a3, Cbll1, Slc26a4, LOC100043531, Bcap29, Dus4l, LOC100043081, Gpr22, Hbp1, Prkar2b, Pik3cg, 2010109K11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079G24.bB6Ng01-079G24.g
ACCDH894847DH894848
length1,110744
definitionDH894847|Mus musculus domesticus DNA, BAC clone: B6Ng01-079G24, 5' end.DH894848|Mus musculus domesticus DNA, BAC clone: B6Ng01-079G24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,970,241 - 31,971,375)(32,072,608 - 32,073,351)
sequence
gaattcttaagttgttaattttgctcattcgattctttgcattgatattc
agttacgtgcccattacgtcatagaaactatcctggaaacaaggatgata
gccatcaacttatatggctagaacttgctcagttggggctgaggataaag
ccagtcctcaccgtgaggagggcctatcgtcggctgactggagaaagggt
ggccattcgtagcttctgactgggcccgtgctggttggttaccttcccag
gttcacgggcactgcatgtgcagacacaacaccaaaggcctgaactgtga
gctgtgcatggatttctaccacgatttgccgtggagacctgctgaaggcc
ggaacagcaacgcctgcaaaagtaagttgtcagtgggagggctgctggag
gccggggttccaggctccgtttcctggggagctgcggtctgcaattgcac
tctttgcagaagggaggaggattgtgtcgttctcctggctgtgtctgttc
cagagctgtaatatgtatgcactgaggccaagttaaaaaaaaaaattagt
atgtttggcattgactcggggaaatggcaacggggtgtccatgatgttat
atctgcctttaagacaagaggacgacagggcaactgaacggcagatacgg
tgcctttcatgcactgaaggcttggtccccagctggtagcactattgaga
agtaattgggtccccaagacagtcactcgatcagtgggttagttcactga
tgactggctgactaggttagtgggttagttcactgatgggttcctagata
actggttgtctagattaggcctacttggaggaggtgcttctcagaggtgg
gccctttgatgttgcttcttgttccaaccctttctgattgttcttctgct
tcctggctgcgttcatgcctttctgcatcacattctgccttagcgcagag
cagcagtgagagctagcagctgtgagtctacctctcaaactgtgacccag
gaaaccctctgagtcatatctcagtgttttgtcacaggaggaagagtctg
ctcatgttagctgcccatggtgctggagtaaggaatgtacctgcctgtca
ctgtcatccc
gaattctttgaaacataatcatctgacctatgaatgactggtatctgttt
gtctagagaagggggttactgacaatttgctgtttaaattcagtgctaaa
tagttgatatcatccactgagtggagtagaaacttgttttgttttcctta
aaatcagagactttggtaaaaacctcaggtataagttacccctgtatcaa
cttttatgttggagtcaaaagagcccagtatggcacaatcctcccagccc
cgtgcagggatggcgcacatagggctgtttatacaagctgattaagattt
cagtttgattgcattcaggtacctgaaagcaagcagtttcaggctatgtt
atttggcacatcttgaagtgcagaaattgttattggttgaaaatatgctt
taaattctgagtaaactttataccttgaacgttggaagatttgggaggtt
gagcagggaggatcgcttcaagttccaggtcagtctggcttatacagtga
acaaacaaacaaccacagaacaataaaacagaaatataaaaagacccaaa
ttatcgcctaggcctgacaactttctcatcttacagaagtcagacaaggc
tagtgttttattgagaggcccctgagctccttctcagctggaggtcagaa
ctcagcatcatcgagggtgggtactggcctttagaattttaatcagaagt
gtgtgcgcgcgcgcgcgcgcgcgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_31970241_31971375
seq2: B6Ng01-079G24.b_44_1153

seq1  GAATTCTTAAGTTGTTAATTTTGCTCATTCGATTCTTTGCATTGATATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAGTTGTTAATTTTGCTCATTCGATTCTTTGCATTGATATTC  50

seq1  AGTTACGTGCCCATTACGTCATAGAAACTATCCTGGAAACAAGGATGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACGTGCCCATTACGTCATAGAAACTATCCTGGAAACAAGGATGATA  100

seq1  GCCATCAACTTATATGGCTAGAACTTGCTCAGTTGGGGCTGAGGATAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCAACTTATATGGCTAGAACTTGCTCAGTTGGGGCTGAGGATAAAG  150

seq1  CCAGTCCTCACCGTGAGGAGGGCCTATCGTCGGCTGACTGGAGAAAGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCCTCACCGTGAGGAGGGCCTATCGTCGGCTGACTGGAGAAAGGGT  200

seq1  GGCCATTCGTAGCTTCTGACTGGGCCCGTGCTGGTTGGTTACCTTCCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATTCGTAGCTTCTGACTGGGCCCGTGCTGGTTGGTTACCTTCCCAG  250

seq1  GTTCACGGGCACTGCATGTGCAGACACAACACCAAAGGCCTGAACTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACGGGCACTGCATGTGCAGACACAACACCAAAGGCCTGAACTGTGA  300

seq1  GCTGTGCATGGATTTCTACCACGATTTGCCGTGGAGACCTGCTGAAGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCATGGATTTCTACCACGATTTGCCGTGGAGACCTGCTGAAGGCC  350

seq1  GGAACAGCAACGCCTGCAAAAGTAAGTTGTCAGTGGGAGGGCTGCTGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGCAACGCCTGCAAAAGTAAGTTGTCAGTGGGAGGGCTGCTGGAG  400

seq1  GCCGGGGTTCCAGGCTCCGTTTCCTGGGGAGCTGCGGTCTGCAATTGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGGGTTCCAGGCTCCGTTTCCTGGGGAGCTGCGGTCTGCAATTGCAC  450

seq1  TCTTTGCAGAAGGGAGGAGGATTGTGTCGTTCTCCTGGCTGTGTCTGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCAGAAGGGAGGAGGATTGTGTCGTTCTCCTGGCTGTGTCTGTTC  500

seq1  CAGAGCTGTAATATGTATGCACTGAGGCCAAGTTAAAAAAAAAAATTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTGTAATATGTATGCACTGAGGCCAAGTTAAAAAAAAAAATTAGT  550

seq1  ATGTTTGGCATTGACTCGGGGAAATGGCAACGGGGTGTCCATGATGTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGGCATTGACTCGGGGAAATGGCAACGGGGTGTCCATGATGTTAT  600

seq1  ATCTGCCTTTAAGACAAGAGGACGACAGGGCAACTGAACGGCAGATACGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCTTTAAGACAAGAGGACGACAGGGCAACTGAACGGCAGATACGG  650

seq1  TGCCTTTCATGCACTGAAGGCTTGGTCCCCAGCTGGTAGCACTATTGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTCATGCACTGAAGGCTTGGTCCCCAGCTGGTAGCACTATTGAGA  700

seq1  AGTAATTGGGTCCCCAAGACAGTCACTCGATCAGTGGGTTAGTTCACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTGGGTCCCCAAGACAGTCACTCGATCAGTGGGTTAGTTCACTGA  750

seq1  TGACTGGCTGACTAGGTTAGTGGGTTAGTTCACTGATGGGTTCCTAGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGGCTGACTAGGTTAGTGGGTTAGTTCACTGATGGGTTCCTAGATA  800

seq1  ACTGGTTGTCTAGATTAGGCCTACTTGGAGGAGGTGCTTCTCAGAGGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTGTCTAGATTAGGCCTACTTGGAGGAGGTGCTTCTCAGAGGTGG  850

seq1  G-CCTTTGATGTTGCTTCTTGTTCCCAACCCTTTCTGATTGTTCTTCTGC  899
      | ||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GCCCTTTGATGTTGCTTCTTGTT-CCAACCCTTTCTGATTGTTCTTCTGC  899

seq1  TTCCTGGCTGCGGTTCCATGCCTTTCTGCCATCACATTCTGCCTTAGCGC  949
      ||||||||||||  | |||||||||||| |||||||||||||||||||||
seq2  TTCCTGGCTGCG--TTCATGCCTTTCTG-CATCACATTCTGCCTTAGCGC  946

seq1  AGAGCCAGCAGTGAGAGCTAGCCAGCTGTGGAGTCTAACCTCTCAAAACT  999
      |||| |||||||||||||||| ||||||| |||||| ||||||| |||||
seq2  AGAG-CAGCAGTGAGAGCTAG-CAGCTGT-GAGTCT-ACCTCTC-AAACT  991

seq1  GTGACCCCAAGGAAACCCTCCTTGAAGTCATATTCCTCAAGTGTTTTGTC  1049
      |||||||  |||||||||||  || ||||||||  ||| |||||||||||
seq2  GTGACCC--AGGAAACCCTC--TG-AGTCATAT--CTC-AGTGTTTTGTC  1033

seq1  ACAGGGAGGGAAGAAGTCTGGCTCATTGTTAAGCTGCCCATGTGCCTGGA  1099
      |||||   ||||| ||||| ||||| |||| |||||||||||   |||||
seq2  ACAGG--AGGAAG-AGTCT-GCTCA-TGTT-AGCTGCCCATGGTGCTGGA  1077

seq1  GTACAGGATATGTCACCTGCCTGTCACTGTCATCCC  1135
      ||| |||| |||| ||||||||||||||||||||||
seq2  GTA-AGGA-ATGT-ACCTGCCTGTCACTGTCATCCC  1110

seq1: chr12_32072608_32073351
seq2: B6Ng01-079G24.g_68_811 (reverse)

seq1  ACACACACACACACACACACACGCGCGCGCGCGCGCGCGCACACACTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACGCGCGCGCGCGCGCGCGCACACACTTCT  50

seq1  GATTAAAATTCTAAAGGCCAGTACCCACCCTCGATGATGCTGAGTTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAATTCTAAAGGCCAGTACCCACCCTCGATGATGCTGAGTTCTGA  100

seq1  CCTCCAGCTGAGAAGGAGCTCAGGGGCCTCTCAATAAAACACTAGCCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGCTGAGAAGGAGCTCAGGGGCCTCTCAATAAAACACTAGCCTTG  150

seq1  TCTGACTTCTGTAAGATGAGAAAGTTGTCAGGCCTAGGCGATAATTTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTTCTGTAAGATGAGAAAGTTGTCAGGCCTAGGCGATAATTTGGG  200

seq1  TCTTTTTATATTTCTGTTTTATTGTTCTGTGGTTGTTTGTTTGTTCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTATATTTCTGTTTTATTGTTCTGTGGTTGTTTGTTTGTTCACTG  250

seq1  TATAAGCCAGACTGACCTGGAACTTGAAGCGATCCTCCCTGCTCAACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCCAGACTGACCTGGAACTTGAAGCGATCCTCCCTGCTCAACCTC  300

seq1  CCAAATCTTCCAACGTTCAAGGTATAAAGTTTACTCAGAATTTAAAGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCTTCCAACGTTCAAGGTATAAAGTTTACTCAGAATTTAAAGCAT  350

seq1  ATTTTCAACCAATAACAATTTCTGCACTTCAAGATGTGCCAAATAACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAACCAATAACAATTTCTGCACTTCAAGATGTGCCAAATAACATA  400

seq1  GCCTGAAACTGCTTGCTTTCAGGTACCTGAATGCAATCAAACTGAAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAACTGCTTGCTTTCAGGTACCTGAATGCAATCAAACTGAAATCT  450

seq1  TAATCAGCTTGTATAAACAGCCCTATGTGCGCCATCCCTGCACGGGGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGCTTGTATAAACAGCCCTATGTGCGCCATCCCTGCACGGGGCTG  500

seq1  GGAGGATTGTGCCATACTGGGCTCTTTTGACTCCAACATAAAAGTTGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATTGTGCCATACTGGGCTCTTTTGACTCCAACATAAAAGTTGATA  550

seq1  CAGGGGTAACTTATACCTGAGGTTTTTACCAAAGTCTCTGATTTTAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTAACTTATACCTGAGGTTTTTACCAAAGTCTCTGATTTTAAGGA  600

seq1  AAACAAAACAAGTTTCTACTCCACTCAGTGGATGATATCAACTATTTAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAGTTTCTACTCCACTCAGTGGATGATATCAACTATTTAGC  650

seq1  ACTGAATTTAAACAGCAAATTGTCAGTAACCCCCTTCTCTAGACAAACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATTTAAACAGCAAATTGTCAGTAACCCCCTTCTCTAGACAAACAG  700

seq1  ATACCAGTCATTCATAGGTCAGATGATTATGTTTCAAAGAATTC  744
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGTCATTCATAGGTCAGATGATTATGTTTCAAAGAATTC  744