BAC Information

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BAC

Clone NameB6Ng01-081G24
Chromosome12 (Build37)
Map Location 22,070,000 - 22,279,198
singlet/doubletdoublet
Overlap geneEG668646, LOC100043416, LOC668650
Upstream geneEG629257, Ddef2, Itgb1bp1, Cpsf3, Iah1, Adam17, Ywhaq, LOC100043407, LOC100042796, 6030426L16Rik, LOC434693, EG668645
Downstream geneEG668496, LOC668653, EG432637, LOC668656, EG629133, EG668660, EG668662, LOC668664, 2410018L13Rik, LOC77114, EG668669
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081G24.bB6Ng01-081G24.g
ACCDH896292DH896293
length8691,018
definitionDH896292|Mus musculus domesticus DNA, BAC clone: B6Ng01-081G24, 5' end.DH896293|Mus musculus domesticus DNA, BAC clone: B6Ng01-081G24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,278,335 - 22,279,198)(22,070,000 - 22,071,035)
sequence
gaattcagtacctgatctgaggaagtgctctgaacaaagcaggaccagag
tctgaaggtagatgagaattgatgctaatcctagaggcctcttccaagag
aaagcacatatacctgaggactgaccctctctgaaacagacagcaagaag
ggcagagaggtggaggatctgcagatgcagagaccctggggctgaaacat
acttaccagggtccaaagaggggaaaaccacagtaatgatgtcccagaag
tgtaagtctaaacagaaagtcagaaatgccattcgggatgttggggagag
tgaccatggagtctgggaaatctgcccccaaggagtggtgggatgtttgt
gtctgaacaggctgcagggtgtgagtaggagcttcctgggtgactggagt
gggtttgacccagatgagcctagcttagtgaggagagtcacccacatggc
tcccatcctgttatagtagaagtttctgttaagaaaaaagttcttgggga
tttcctgttcttttctccaccttctttgattccccaactcttatggggcc
tctcgggcttgggaaagagcagagggagagaggtctggctgtgtagggtg
agactttccgtgcagccttgccagctgcccttctttctccttttacattg
cacttttaccttgttgattaagtttttatgcatatggattgggtttgtgt
gtgatgggcaagttgatccagtgaaatgtaggttgccacagaccctcctg
ggcccctttgtcttcatggaacaggtctctagtcttgggtgggcaaagcg
taggatgaattgacagacatatgcacacaggagaggttgtgttggatctg
aatggattttgtcaaattg
gaattcctagtgtctgatgccctgtggggggctttctttgtgaaaagctt
acacattgttttcctgaggctttttgatttgcttggaaaactaactctag
cagcctgagggttgggcataatccccccagacagcagtggggagccaggc
actttgcctccaaactttcccttttctgttagtgcttaaaaaacagggtt
acattctggttctgtttgttccagtactcctctcctctctctcctgacct
ctcccactcagcttgggcttcacagccaatgctgatctcactggctgact
ctgcattgcattttggtgagtcccacttactagtgccaagaagtaaacgc
agaagcagctagctcctgtcctggtcaaagtttcctaggggctcccagcc
tccccagggtcatgccctgaaccctcccctgagtagaacccctgagtgtg
gcaaagaaggcccctgcatgggccagacctgtagaaatgtctggttaggc
aggctctctgggtccctctgagtaattagctggagacgggagtccagaaa
ggacgagagcaagggatttgacagcagggttgccagctgatcaatgtggt
ctttgttccttgttccaaaaaagatgacacagtgatctagcctggagctt
ttaggaacaagcagcatccctggaagatgctgctcactactgtgaagcag
gaagagcactgatgggaagcaggagtaacctccatccttcatgtctcagg
ggactcatagcccatataagcaggctgctcacttgtctgaagtctgatcc
tacagatcctgtcctggctagtttatgtcaacttaacacaagctagagtc
atctgagaggagaatctagattagaaaatgcttccatagatccagctgta
aggcattcttaatgaagaaattaaggcattcatattagatatgggagggc
ccaccattgagtgctgtcatctctggcctggtggtcctggtctataagaa
agcaggtcgagcaagcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_22278335_22279198
seq2: B6Ng01-081G24.b_47_915 (reverse)

seq1  CAATTTGACAAAATACATTCAGATCCAACACAACCTCTCCTGTGTGCATA  50
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAATTTGACAAAATCCATTCAGATCCAACACAACCTCTCCTGTGTGCATA  50

seq1  TGTCTGTCAATTCATCCTACGCTTTGCCCACCCAAGACTAGAGACCTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCAATTCATCCTACGCTTTGCCCACCCAAGACTAGAGACCTGTT  100

seq1  CCATGAAGACAAAGGGGCCCA-GAGGGTCTGTGGCAACCTACA-TTCACT  148
      ||||||||||||||||||||| ||||||||||||||||||||| ||||||
seq2  CCATGAAGACAAAGGGGCCCAGGAGGGTCTGTGGCAACCTACATTTCACT  150

seq1  GGATC-ACTTGCCCATCACACACAAA-CCAATCCATATGCAT-AAAACTT  195
      ||||| |||||||||||||||||||| ||||||||||||||| |||||||
seq2  GGATCAACTTGCCCATCACACACAAACCCAATCCATATGCATAAAAACTT  200

seq1  AATCAACAAGGTAAAAGTGCAATGTAAAAGGAGAAAGAAGGGCAGCTGGC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACAAGGTAAAAGTGCAATGTAAAAGGAGAAAGAAGGGCAGCTGGC  250

seq1  AAGGCTGCACGGAAAGTCTCACCCTACACAGCCAGACCTCTCTCCCTCTG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGCACGGAAAGTCTCACCCTACACAGCCAGACCTCTCTCCCTCTG  300

seq1  CTCTTTCCCAAGCCCGAGAGGCCCCATAAGAGTTGGGGAATCAAAGAAGG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCCCAAGCCCGAGAGGCCCCATAAGAGTTGGGGAATCAAAGAAGG  350

seq1  TGGAGAAAAGAACAGGAAATCCCCAAGAACTTTTTTCTTAACAGAAACTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAAAGAACAGGAAATCCCCAAGAACTTTTTTCTTAACAGAAACTT  400

seq1  CTACTATAACAGGATGGGAGCCATGTGGGTGACTCTCCTCACTAAGCTAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATAACAGGATGGGAGCCATGTGGGTGACTCTCCTCACTAAGCTAG  450

seq1  GCTCATCTGGGTCAAACCCACTCCAGTCACCCAGGAAGCTCCTACTCACA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATCTGGGTCAAACCCACTCCAGTCACCCAGGAAGCTCCTACTCACA  500

seq1  CCCTGCAGCCTGTTCAGACACAAACATCCCACCACTCCTTGGGGGCAGAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCAGCCTGTTCAGACACAAACATCCCACCACTCCTTGGGGGCAGAT  550

seq1  TTCCCAGACTCCATGGTCACTCTCCCCAACATCCCGAATGGCATTTCTGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGACTCCATGGTCACTCTCCCCAACATCCCGAATGGCATTTCTGA  600

seq1  CTTTCTGTTTAGACTTACACTTCTGGGACATCATTACTGTGGTTTTCCCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTTTAGACTTACACTTCTGGGACATCATTACTGTGGTTTTCCCC  650

seq1  TCTTTGGACCCTGGTAAGTATGTTTCAGCCCCAGGGTCTCTGCATCTGCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGACCCTGGTAAGTATGTTTCAGCCCCAGGGTCTCTGCATCTGCA  700

seq1  GATCCTCCACCTCTCTGCCCTTCTTGCTGTCTGTTTCAGAGAGGGTCAGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCCACCTCTCTGCCCTTCTTGCTGTCTGTTTCAGAGAGGGTCAGT  750

seq1  CCTCAGGTATATGTGCTTTCTCTTGGAAGAGGCCTCTAGGATTAGCATCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGTATATGTGCTTTCTCTTGGAAGAGGCCTCTAGGATTAGCATCA  800

seq1  ATTCTCATCTACCTTCAGACTCTGGTCCTGCTTTGTTCAGAGCACTTCCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCATCTACCTTCAGACTCTGGTCCTGCTTTGTTCAGAGCACTTCCT  850

seq1  CAGATCAGGTACTGAATTC  864
      |||||||||||||||||||
seq2  CAGATCAGGTACTGAATTC  869

seq1: chr12_22070000_22071035
seq2: B6Ng01-081G24.g_69_1086

seq1  GAATTCATAGTGTCTGATGCCCTGTGGGGGGCTTTCTTTGTGAAAAGCTT  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGTGTCTGATGCCCTGTGGGGGGCTTTCTTTGTGAAAAGCTT  50

seq1  ACACATTGTTTTCCTGAGGCTTTTTGATTTGCTTGGAAAACCAACTCTAG  100
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACACATTGTTTTCCTGAGGCTTTTTGATTTGCTTGGAAAACTAACTCTAG  100

seq1  CAGCCTGAGGGTTGGACATAAATCCCCCCAGACAGCAGTGGGGAGCCAGG  150
      ||||||||||||||| ||| ||||||||||||||||||||||||||||||
seq2  CAGCCTGAGGGTTGGGCAT-AATCCCCCCAGACAGCAGTGGGGAGCCAGG  149

seq1  CACTTTGCCCCCAAACTTTCCCTTTTCTGTTAGTGCTTAAAAAACAGGGT  200
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGCCTCCAAACTTTCCCTTTTCTGTTAGTGCTTAAAAAACAGGGT  199

seq1  TACGTCCTGGTTCTGTTTGTTCCAGTACTCCTCTCCTCTCTCTCCTGACC  250
      ||| | ||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCTGGTTCTGTTTGTTCCAGTACTCCTCTCCTCTCTCTCCTGACC  249

seq1  TCTCCCACTCAGCTTGGGCTTCACAGCCAATGCTGATCTCACTGGCTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCACTCAGCTTGGGCTTCACAGCCAATGCTGATCTCACTGGCTGAC  299

seq1  TCTGCATTGCATTTTGGTGAGTCCCACTTACTAGTGCCAAGAAGTGAACG  350
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCTGCATTGCATTTTGGTGAGTCCCACTTACTAGTGCCAAGAAGTAAACG  349

seq1  CAGAAGCAGCTAGCTCCTGTCCTGGTCAAAGTTTCCTAGGGGCTCCAAGC  400
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAGAAGCAGCTAGCTCCTGTCCTGGTCAAAGTTTCCTAGGGGCTCCCAGC  399

seq1  CTCCTCAGGTCCATGCCCTGAACCCTCCCCTGAGTAGAACCCCTGACTGT  450
      |||| ||||  ||||||||||||||||||||||||||||||||||| |||
seq2  CTCCCCAGGGTCATGCCCTGAACCCTCCCCTGAGTAGAACCCCTGAGTGT  449

seq1  GGCAAAGAAGGCCCCTGCATGGGCCAGACCTGTAGAAATGTCTGGTTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGAAGGCCCCTGCATGGGCCAGACCTGTAGAAATGTCTGGTTAGG  499

seq1  CAGGCTCTCTGGGTCCCTCTGAGTAATTACCTGGAGATGGGAGCCCAGCA  550
      ||||||||||||||||||||||||||||| ||||||| ||||| |||| |
seq2  CAGGCTCTCTGGGTCCCTCTGAGTAATTAGCTGGAGACGGGAGTCCAGAA  549

seq1  AGGACAAGAGCAAGGGATTTGACAGCACGGTTGCCAGCTGATCAATGTGG  600
      ||||| ||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGGACGAGAGCAAGGGATTTGACAGCAGGGTTGCCAGCTGATCAATGTGG  599

seq1  TCTTTGTTCCTTGTTCCAAAAAAGATGACACAGTGATCTACCCTGAAGCT  650
      |||||||||||||||||||||||||||||||||||||||| |||| ||||
seq2  TCTTTGTTCCTTGTTCCAAAAAAGATGACACAGTGATCTAGCCTGGAGCT  649

seq1  TTTAGGAACAAATAGCATCCCTGGAAGATGCTGCTCACTACTGTGAACCA  700
      |||||||||||  |||||||||||||||||||||||||||||||||| ||
seq2  TTTAGGAACAAGCAGCATCCCTGGAAGATGCTGCTCACTACTGTGAAGCA  699

seq1  GGAAGAGCACTGATGGCAAGCCAGGAGTAACCTCCATCCTTCATGTCTCA  750
      |||||||||||||||| ||| |||||||||||||||||||||||||||||
seq2  GGAAGAGCACTGATGGGAAG-CAGGAGTAACCTCCATCCTTCATGTCTCA  748

seq1  GGGGACTCATAGCCCATATAAGCAGGCTTCTCCCTTGTCTGAAGTCTGAT  800
      |||||||||||||||||||||||||||| ||| |||||||||||||||||
seq2  GGGGACTCATAGCCCATATAAGCAGGCTGCTCACTTGTCTGAAGTCTGAT  798

seq1  CCTACAGATCCTGTCCTGGCTAGTTTTATGTCAACTTAACACAAGCTAGA  850
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCTACAGATCCTGTCCTGGCTAG-TTTATGTCAACTTAACACAAGCTAGA  847

seq1  GTCATCTGAGAGGAGAAATCTAGATTTAGAAAAATGCTTCCATAAGATCC  900
      ||||||||||||||| |||||||| |||| ||||||||||||| ||||||
seq2  GTCATCTGAGAGGAG-AATCTAGA-TTAG-AAAATGCTTCCAT-AGATCC  893

seq1  AGCTGTAAGGCATTTTCTTAATGAAGAAATTAAGGCAATTTCATAATTAG  950
      ||||||||||||  |||||||||||||||||||||||  ||||| |||||
seq2  AGCTGTAAGGCA--TTCTTAATGAAGAAATTAAGGCA--TTCAT-ATTAG  938

seq1  ATTTGGGAGGGCCCAGCCAATTGAGGGTGCTGTCATCTCTGGGCTGGCGG  1000
      || ||||||||||||  | |||||  |||||||||||||||| |||| ||
seq2  ATATGGGAGGGCCCA--CCATTGA--GTGCTGTCATCTCTGGCCTGGTGG  984

seq1  TCCTGGGTTCTATAAGAAAGCAGGCTGAGCAAGCCA  1036
      ||||||  ||||||||||||||||  ||||||||||
seq2  TCCTGG--TCTATAAGAAAGCAGGTCGAGCAAGCCA  1018