BAC Information

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BAC

Clone NameB6Ng01-081M07
Chromosome12 (Build37)
Map Location 38,872,633 - 38,873,821
singlet/doubletsinglet
Overlap geneDgkb
Upstream geneMeox2, A530016O06Rik, LOC100043139
Downstream geneLOC668824, LOC100043142, Etv1, LOC100043145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081M07.bB6Ng01-081M07.g
ACCDH896518DH896519
length1,167934
definitionDH896518|Mus musculus domesticus DNA, BAC clone: B6Ng01-081M07, 5' end.DH896519|Mus musculus domesticus DNA, BAC clone: B6Ng01-081M07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttctcattctaaagcttccagtcaagggccagacacccaacat
gattatattctagcttgagtatattaatataggttgtatttgcaaaaaag
ttcacattcactcatatctggagttaagattttgatctttacatatgatt
tagatgggaccatttttaccccaccccatgacagcttatctatgagtcta
tatattcaggatcatatttattccatgagaataatttcaataaagcaaca
gtatattttagagttattttaaggaagttgcatttttatggcctggcaga
atgtaggtttatttagttctattgtatacaagaattcagatgcctctttg
actttactgccttttatcttttggcaaagattagcattgcctaagcagaa
ttgtgacccatgtttatataaagaaatttatgtactactgtgagaaggac
atggtaattgtagatagttgtgtaaaagtacttttgtttcgtatattggg
cagaacctgaactctaaagaagagcctctgtgtgacaaatgctggagaat
acaggacagcacaaatcctccttgaatacagttctctcaccaccattaaa
tcaacaatatgcctaaactgaatggctaattaacagcttaaacagaggag
ttaatacagctaaggcttaaatgaaatgaccttctgaaatgagtctataa
actgaaactgaaaaaatactgtggaacaacacacatgaagtgtgtctatt
ttatatactaaatcaatatcaagtagggaaagcagaaatttataaattgc
tttgagaattattttcatcatatctttgataaaaccatctctttgctttc
aaactatcatactttatcattttgctatacttttactttaaactagtggt
caagttgataaaatatcagctaacgtcatacatactgtaaaataaattat
tgcattatatggttacatgttaacttatgtcgggctgtaattacaatata
aggatccactttttaatcatatcatcttcttttatttatatctgctccta
ctgagaatgattcagtacattacaattggatgcaaggtacacctatgatg
ggatcatatggcccctactgagctgtgcacttggaatgacttgagaaacc
tgaggtccaaagaaaaa

gaattctcacctgaggaatatcgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgactgc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
ggaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacatattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
gagggctcctttttctaaaccaccatcacttcttggcagttgtttttgtt
gatcttagccattctgtctgggaggagattaaaaatctcaaaatagtttt
gatttgcagttccttaactggcattatgatgaaaaaattttgaggtattt
cttagccaattaatttcttccttagagaattctttgcttaaatcccttac
tgatttttcattggtctttgattccttgtcttttctttttgaactcattt
tatggtctgagtaacatcactgtttaggtgtgtggtctacaaagattctc
tcctttcccatgttttctcctcatgaatgggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_38872633_38873821
seq2: B6Ng01-081M07.b_43_1209

seq1  GAATTCCTTCTCATTCTAAAGCTTCCAGTCAAGGGCCAGACACCCAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTCATTCTAAAGCTTCCAGTCAAGGGCCAGACACCCAACAT  50

seq1  GATTATATTCTAGCTTGAGTATATTAATATAGGTTGTATTTGCAAAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATATTCTAGCTTGAGTATATTAATATAGGTTGTATTTGCAAAAAAG  100

seq1  TTCACATTCACTCATATCTGGAGTTAAGATTTTGATCTTTACATATGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATTCACTCATATCTGGAGTTAAGATTTTGATCTTTACATATGATT  150

seq1  TAGATGGGACCATTTTTACCCCACCCCATGACAGCTTATCTATGAGTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGGACCATTTTTACCCCACCCCATGACAGCTTATCTATGAGTCTA  200

seq1  TATATTCAGGATCATATTTATTCCATGAGAATAATTTCAATAAAGCAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCAGGATCATATTTATTCCATGAGAATAATTTCAATAAAGCAACA  250

seq1  GTATATTTTAGAGTTATTTTAAGGAAGTTGCATTTTTATGGCCTGGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTTTAGAGTTATTTTAAGGAAGTTGCATTTTTATGGCCTGGCAGA  300

seq1  ATGTAGGTTTATTTAGTTCTATTGTATACAAGAATTCAGATGCCTCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGTTTATTTAGTTCTATTGTATACAAGAATTCAGATGCCTCTTTG  350

seq1  ACTTTACTGCCTTTTATCTTTTGGCAAAGATTAGCATTGCCTAAGCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACTGCCTTTTATCTTTTGGCAAAGATTAGCATTGCCTAAGCAGAA  400

seq1  TTGTGACCCATGTTTATATAAAGAAATTTATGTACTACTGTGAGAAGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACCCATGTTTATATAAAGAAATTTATGTACTACTGTGAGAAGGAC  450

seq1  ATGGTAATTGTAGATAGTTGTGTAAAAGTACTTTTGTTTCGTATATTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAATTGTAGATAGTTGTGTAAAAGTACTTTTGTTTCGTATATTGGG  500

seq1  CAGAACCTGAACTCTAAAGAAGAGCCTCTGTGTGACAAATGCTGGAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCTGAACTCTAAAGAAGAGCCTCTGTGTGACAAATGCTGGAGAAT  550

seq1  ACAGGACAGCACAAATCCTCCTTGAATACAGTTCTCTCACCACCATTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACAGCACAAATCCTCCTTGAATACAGTTCTCTCACCACCATTAAA  600

seq1  TCAACAATATGCCTAAACTGAATGGCTAATTAACAGCTTAAACAGAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAATATGCCTAAACTGAATGGCTAATTAACAGCTTAAACAGAGGAG  650

seq1  TTAATACAGCTAAGGCTTAAATGAAATGACCTTCTGAAATGAGTCTATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACAGCTAAGGCTTAAATGAAATGACCTTCTGAAATGAGTCTATAA  700

seq1  ACTGAAACTG-AAAAATACTGTGGAACAACACACATGAAGTGTGTCTATT  749
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACTGAAAAAATACTGTGGAACAACACACATGAAGTGTGTCTATT  750

seq1  TTATATACTAAATCAATATCAAGTAGGGAAAGCAGAAATTTATAAATTGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATACTAAATCAATATCAAGTAGGGAAAGCAGAAATTTATAAATTGC  800

seq1  TTTGAGAATTATTTTCATCATATCTTTGATAAAAACCATCTCTTTGCTTT  849
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTGAGAATTATTTTCATCATATCTTTGAT-AAAACCATCTCTTTGCTTT  849

seq1  CAAACTATCATACTTTATCATTTTGCTATACTTTTACTTTAAACTAGTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTATCATACTTTATCATTTTGCTATACTTTTACTTTAAACTAGTGG  899

seq1  TCAAGGTTGATAAAAATATCAGCTAAGGTTCATACATACTGTAAAATAAA  949
      |||| |||||| |||||||||||||| | |||||||||||||||||||||
seq2  TCAA-GTTGAT-AAAATATCAGCTAACG-TCATACATACTGTAAAATAAA  946

seq1  -TATTGCATTATATGGTTACATGTTAACCTAATGTCGGGCTGGTAAATAC  998
       |||||||||||||||||||||||||| || |||||||||| |||| |||
seq2  TTATTGCATTATATGGTTACATGTTAA-CTTATGTCGGGCT-GTAATTAC  994

seq1  AATATAAAGATCCACTTTTATAATCATAATCATCTTCTTTTATTTATATC  1048
      ||||||| ||||||||||| ||||||| ||||||||||||||||||||| 
seq2  AATATAAGGATCCACTTTT-TAATCAT-ATCATCTTCTTTTATTTATAT-  1041

seq1  CTGCTCCTACTGAGATGAATCTCAGGTTACATTTACATATTGAATTACAA  1098
      |||||||||||||||   || ||||  |||| ||||| |||| ||    |
seq2  CTGCTCCTACTGAGAATGAT-TCAG--TACA-TTACA-ATTGGAT--GCA  1084

seq1  AGTTACAACTAATGATGGGATCAATTATGCCCCATACTGAGCTGTGCACT  1148
      || |||| || ||||||||||||  |||| ||| ||||||||||||||| 
seq2  AGGTACACCT-ATGATGGGATCA--TATGGCCCCTACTGAGCTGTGCAC-  1130

seq1  TTGGAATGACTTTGAGAAAACATGAGGGTCAAAAAGAAAAA  1189
      |||||||||| ||||| |||| |||||  |  |||||||||
seq2  TTGGAATGAC-TTGAG-AAACCTGAGGTCC--AAAGAAAAA  1167


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