BAC Information

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BAC

Clone NameB6Ng01-081N11
Chromosome12 (Build37)
Map Location 8,736,082 - 8,737,175
singlet/doubletsinglet
Overlap genePum2
Upstream geneEG668388, Apob, 1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154
Downstream geneF730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32, LOC633030, LOC100042238, Osr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081N11.bB6Ng01-081N11.g
ACCDH896571DH896572
length1,0731,023
definitionDH896571|Mus musculus domesticus DNA, BAC clone: B6Ng01-081N11, 5' end.DH896572|Mus musculus domesticus DNA, BAC clone: B6Ng01-081N11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtaaatctttcagtcatttataaatgtttagctcattctagc
aagcccatactccccttcccccagcatttaaaaatttggtactctatatt
ttgctaatcactatttcttccttattccccataatgttggaggagtttaa
tacatggccatcctaaaatttggataacttaaaaagaacaatagtcatta
ttggatggtacagtcgtactaggtttgggtagctaattatggttttctgt
atttggcctaatatctaaataaatgttgaatcactagagtcccataagag
tcccagtatacttaaaataacttactttttttttcattaaaaataatgta
atagattgtttcttacttggattaagaaatcataattttaaaacagtctc
acattaggtaaggatagcatactctagttctttatatgtaattgataact
ttcaagagagcacagatacaaatttggacttcaagggatttttctaaaat
acttaatgtttatatttaatacttgtagaatccctaatcattttccattt
gttttcttatcacttcaaatttttttctgatgtggaaaatgataaaattg
gtctgggggtgtagctcagttggtagagtgcttgcccagtgtgcacaaag
ccctaggtttgatctgtagcacagcctagactggatgtggtggcataagt
ttattatccatttctttaaaaaggtagagttataagaatcagaggttcag
gtcatttttggctttacaatgagcttgcaacaaacctagcttcatgaaac
actgtctccccccagaacagaaataaagtggcaaactaatgcagtactag
ttatcagtgcttgccattttcctgacgtgtctctgactaatattcatctt
tgtagacagctataaacttgtaggagtaaaagcactttcagtttcaagaa
atacagtaacagatgctcacttgctacagttgttgtcttacagaagtact
acagcgtagcacatctgtccatttgggacttggtttaacgccctactttt
attaagttatggtgtatgcctgc
gaattcaaagcagctaaagaacctgagggcaggccgtgcctgaagtcata
aaggagcagagacgcgtcccacaattccacaggctatgctgactcgttcc
aacatgtgggggaaatacgatagcacctagatcaaaagcagaggcttttt
agccaatttaagctccttaaagcaaatttaggcctgtcccttctccctac
tgccttcttaaaaatgcaactgccccctaaaagtgatagattacatacat
cctctgcctgatggctgacctatgaaacccactgtctgggtctgatatgg
aaatgccaccagcacataggtagatgggagaacccccagtatatgccagt
gacacagaaccaaaggatgtgtatatataaagagatgtcttcaaaaatac
ttacttgcccgcgccattatgaagactgatgtaaaggttaatgctatcaa
cttgacaagacctactaacagataaagcctctgggcatgtctgtgcagag
taggggtgagggtgttatattcctagatcacgttaattgaattgggaaga
ccttccctaagagtgggcaacaccattccccaggccacaatctcagattg
cattaaaagcagaaagtctggcttgctcagccgtttaagatatagttctg
ctcttctggaggacctgggtttggtctcaacacctacatcagatggctca
caatcagctgtaactctagctacaggggatctaaggacctcatctggctt
tcctcaggcactctcactaacacacagaaatgtgcacatacacctacact
aataaataaaaatcaaaattatcctttaaaaaaggaaaaagcaacgagta
gccatttcttcctccttcctgacttaggtggaccatggccgccagctgtc
tgcttctgcattgagactcgctgctgagcagactgtgtctcttctaacta
gagcccaataggcctgtgttttgctctactgggtattttgtccaagcatg
gagaaaacaaataaacgggtatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_8736082_8737175
seq2: B6Ng01-081N11.b_43_1115

seq1  GAATTCCTGTAAATCTTTCAGTCATTTATAAATGTTTAGCTCATTCTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTAAATCTTTCAGTCATTTATAAATGTTTAGCTCATTCTAGC  50

seq1  AAGCCCATACTCCCCTTCCCCCAGCATTTAAAAATTTGGTACTCTATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCATACTCCCCTTCCCCCAGCATTTAAAAATTTGGTACTCTATATT  100

seq1  TTGCTAATCACTATTTCTTCCTTATTCCCCATAATGTTGGAGGAGTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAATCACTATTTCTTCCTTATTCCCCATAATGTTGGAGGAGTTTAA  150

seq1  TACATGGCCATCCTAAAATTTGGATAACTTAAAAAGAACAATAGTCATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGGCCATCCTAAAATTTGGATAACTTAAAAAGAACAATAGTCATTA  200

seq1  TTGGATGGTACAGTCGTACTAGGTTTGGGTAGCTAATTATGGTTTTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGGTACAGTCGTACTAGGTTTGGGTAGCTAATTATGGTTTTCTGT  250

seq1  ATTTGGCCTAATATCTAAATAAATGTTGAATCACTAGAGTCCCATAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCCTAATATCTAAATAAATGTTGAATCACTAGAGTCCCATAAGAG  300

seq1  TCCCAGTATACTTAAAATAACTTACTTTTTTTTTCATTAAAAATAATGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTATACTTAAAATAACTTACTTTTTTTTTCATTAAAAATAATGTA  350

seq1  ATAGATTGTTTCTTACTTGGATTAAGAAATCATAATTTTAAAACAGTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTGTTTCTTACTTGGATTAAGAAATCATAATTTTAAAACAGTCTC  400

seq1  ACATTAGGTAAGGATAGCATACTCTAGTTCTTTATATGTAATTGATAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGGTAAGGATAGCATACTCTAGTTCTTTATATGTAATTGATAACT  450

seq1  TTCAAGAGAGCACAGATACAAATTTGGACTTCAAGGGATTTTTCTAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAGAGCACAGATACAAATTTGGACTTCAAGGGATTTTTCTAAAAT  500

seq1  ACTTAATGTTTATATTTAATACTTGTAGAATCCCTAATCATTTTCCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATGTTTATATTTAATACTTGTAGAATCCCTAATCATTTTCCATTT  550

seq1  GTTTTCTTATCACTTCAAATTTTTTTCTGATGTGGAAAATGATAAAATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTATCACTTCAAATTTTTTTCTGATGTGGAAAATGATAAAATTG  600

seq1  GTCTGGGGGTGTAGCTCAGTTGGTAGAGTGCTTGCCCAGTGTGCACAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGGGGTGTAGCTCAGTTGGTAGAGTGCTTGCCCAGTGTGCACAAAG  650

seq1  CCCTAGGTTTGATCTGTAGCACAGCCTAGACTGGATGTGGTGGCATAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGTTTGATCTGTAGCACAGCCTAGACTGGATGTGGTGGCATAAGT  700

seq1  TTATTATCCATTTC-TTAAAAAGGTAGAGTTATAAGAATCAGAGGTTCAG  749
      |||||||||||||| |||||||||||||||||||||||||||||||||| 
seq2  TTATTATCCATTTCTTTAAAAAGGTAGAGTTATAAGAATCAGAGGTTCA-  749

seq1  GGTCATTTTTGGCTTTACAATGAGCTTGCAACAAACCTAGCTTCATGAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTTTTGGCTTTACAATGAGCTTGCAACAAACCTAGCTTCATGAAA  799

seq1  CACTGTCTCCCCCCAGAACAGAAATAAAGTGGCAAAACTAATGCAGTACT  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CACTGTCTCCCCCCAGAACAGAAATAAAGTGGC-AAACTAATGCAGTACT  848

seq1  AGTTATCAGGTGCTTGCCATTTTCCTGACGTGTCTTCTGAACTAATATTC  899
      |||||||| ||||||||||||||||||||||||| |||| ||||||||||
seq2  AGTTATCA-GTGCTTGCCATTTTCCTGACGTGTC-TCTG-ACTAATATTC  895

seq1  ATCTTTGTAGAACAGCTATAAACTTGTAGGGAGTAAAAGGCACTTTCAGT  949
      |||||||||| ||||||||||||||||| ||||||||| |||||||||||
seq2  ATCTTTGTAG-ACAGCTATAAACTTGTA-GGAGTAAAA-GCACTTTCAGT  942

seq1  TTCAAGAAATACAGT-ACAGGAATGCTTCACTTGCCTAACAG-TGTTGTC  997
      ||||||||||||||| ||||  |||| ||||||||   |||| |||||||
seq2  TTCAAGAAATACAGTAACAG--ATGC-TCACTTGC--TACAGTTGTTGTC  987

seq1  -TACAGAAGTACTACAGCGTAGGGCACATCTGGTCAATTTGGACTTTGTG  1046
       ||||||||||||||||||||  |||||||||  || || |||||| || 
seq2  TTACAGAAGTACTACAGCGTA--GCACATCTGTCCATTTGGGACTTGGT-  1034

seq1  TTAACGCTCTTAAATTTTTTATTTTATGTATATGGGTGTTATGCCTGC  1094
      ||||||| | ||  ||| |||  ||||       |||| |||||||||
seq2  TTAACGC-CCTACTTTTATTAAGTTAT-------GGTG-TATGCCTGC  1073