BAC Information

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BAC

Clone NameB6Ng01-084D17
Chromosome12 (Build37)
Map Location 98,943,773 - 98,944,960
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628277, LOC382626, LOC100039743, LOC667732
Downstream geneLOC628351, LOC100039770, LOC667746, Galc, Gpr65, Kcnk10, Spata7, Ptpn21
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084D17.bB6Ng01-084D17.g
ACCDH898253DH898254
length1,1851,230
definitionDH898253|Mus musculus domesticus DNA, BAC clone: B6Ng01-084D17, 5' end.DH898254|Mus musculus domesticus DNA, BAC clone: B6Ng01-084D17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctccttattaggccatctcttaactttgaaatccttatcctaat
tacaattttatatatacctatatgaatcttcattaatatatttctattca
tgtactgagggttcatgaggttgtggactatttacatttaatactgttga
ataataattaattatgaataaatatgagcccaaagcacgataatttatta
gctcctgtgattaatgaagtatatcagggtaatatgagcatagattattc
tttggaatttttttttcattctgaaggtgtatgctgtctgtttctatact
tcatacatatgtttcagatacaaagttagagtctatggacttataggagt
ttcacattaagggccacaaggataaatagagctaattatggaacagcttt
aggtcagactaactgtatttgtagtgcctgctatttgagtctgcctaatc
cctattagggagtagaatagtattgttccattcagaaaggagtagattga
gacttatgtatccctagacaaaagaatgcattattcatgtgcttgcaagt
tcatgcaaagcaaagtaaacttaatgaagatttatatcaggatctacttc
ctggctttaaaatacattatttcttgggcttatcatgtgagggaagtggt
agaaacctcatcctccaagctattaagactccatgaacactgggttagaa
aatactctagagattcatcttttgtgaattagggcatgtggtggttgtgg
gctttatgacataatcagtcatttgtcctctccaccattttttggaagaa
gacattgaaaagaactttaatcatcattgagtggtgctattaagtacaca
gttttgtgtatggaagagggattcatgtttttctttaatcagaatgtttt
atgagaacggacatgacattcctgactgtcctaagcagatgcctctctac
catgagttcataagcctgaagcattatcctagtctgggacatgaggaaac
atatcttccatgcttctttcccagtcctaaagccattcttaattaactta
tatttctagaggtagcatacagcccccataaggacaacattggtcctttg
tggtagtatgaataagcagagctgactggatggatggatgggtgcatcaa
ttatccatcaccaattcctgaaatacactgatggc
gaattcctatgcctgataaacagcttcggtgaagtagctggatataaaat
taactcaaacaagtcaatagcctttctctacacaaaggataaacaggctg
agaaaaaaattagggaaacaacacccttcttaatagtcacaaataattta
aaataacttggagtgactctaactaaggaagtgaaagatctgtatgataa
gaacttcaaatctctgaagaaagaaattaaagaagatctcagaagatgga
aagatctcccatgctcatggattggcaggatcaatatagtaaaaatggct
atcttgacaaaagcaatctacagattcaatgcaatccccatcaaaattcc
aactcaattcttcaacgaattacaaagggcaatcggcagattcatctgga
ataacaaaaaacctaggatagcaaaaactcttctcaaggataaaagaacc
tctggtgaaatcaccatgcctgacctaaagctgtactacagagcaattgt
gataaaaactgcatggtactggtacagtgaatgacaagtagaccaatgga
acagaattgatgacccagagatgaacccgcacacctatggtcacttgatc
tttgacaagggagctaaaaccatccattggaaaaaagacagcattttcaa
caaatggtgctggcacaacttgcggttatcatgtagaaaaatgcgaattg
atccatttctatctccttgtactaaggtcaaatctaagtggattaaggaa
ctccacataaaaccagagacactgaaacttagtggagaaagtacgagaaa
gtaggggaaagccttgaagatatgggtatagggcaaaaattcctgaatgg
aacagcaatggcgtgtgctgtaagatggagaatcgataaatgggacctca
taaaattgcaaagcttctgcaaagcaaagacaccgtcaatagacagagac
caccacagattgggaaaggatctttacctatcccaatcatatagggacta
tatccatatatataaagaacctcagaaggtggactccagaaatcaaataa
caccattaaaaatgggactcaaagctgaacaaagatctcactgaggaata
tcgatggcaagaagcatctgaaaaatgttgaccttcttaatctcagaatg
ccaatcaacaccctggattcacctcacagtgatgcctaaatcaatcaggt
ccgcatcctgaaagatgtggaaaggagtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_98943773_98944960
seq2: B6Ng01-084D17.b_47_1231 (reverse)

seq1  GCCATTCAGTGTAATTTCAGGAA-TAGTGATGGATAATTTGATGCACCCA  49
      |||| ||||||| |||||||||| | ||||||||||| ||||||||||||
seq2  GCCA-TCAGTGT-ATTTCAGGAATTGGTGATGGATAA-TTGATGCACCCA  47

seq1  TCCAT-CATCCAGTCAGCTCTGCTTATTCATACTACCAACAAAGGACCAA  98
      ||||| ||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCCATCCATCCAGTCAGCTCTGCTTATTCATACTACC-ACAAAGGACCAA  96

seq1  TGTTGTCTTTATTGGGGGCTGTATGCTAACTTCTAGAAATATAAGTTAAT  148
      ||||||| ||| ||||||||||||||| || |||||||||||||||||||
seq2  TGTTGTCCTTA-TGGGGGCTGTATGCT-ACCTCTAGAAATATAAGTTAAT  144

seq1  TAAGAATGGCTTTAGGACTGGGAAAG-AGCATGGAAGATATGTTTCCTCA  197
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TAAGAATGGCTTTAGGACTGGGAAAGAAGCATGGAAGATATGTTTCCTCA  194

seq1  TGTCCCAGACTAGGATAATGCTTCAGGCTTATGAACTCATGGTAGAGAGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCAGACTAGGATAATGCTTCAGGCTTATGAACTCATGGTAGAGAGG  244

seq1  CATCTGCTTAGGACAGTCAGGAATGTCATGTCCGTTCTCATAAAACATTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCTTAGGACAGTCAGGAATGTCATGTCCGTTCTCATAAAACATTC  294

seq1  TGATTAAAGAAAAACATGAATCCCTCTTCCATACACAAAACTGTGTACTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAAGAAAAACATGAATCCCTCTTCCATACACAAAACTGTGTACTT  344

seq1  AATAGCACCACTCAATGATGATTAAAGTTCTTTTCAATGTCTTCTTCCAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCACCACTCAATGATGATTAAAGTTCTTTTCAATGTCTTCTTCCAA  394

seq1  AAAATGGTGGAGAGGACAAATGACTGATTATGTCATAAAGCCCACAACCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGTGGAGAGGACAAATGACTGATTATGTCATAAAGCCCACAACCA  444

seq1  CCACATGCCCTAATTCACAAAAGATGAATCTCTAGAGTATTTTCTAACCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGCCCTAATTCACAAAAGATGAATCTCTAGAGTATTTTCTAACCC  494

seq1  AGTGTTCATGGAGTCTTAATAGCTTGGAGGATGAGGTTTCTACCACTTCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCATGGAGTCTTAATAGCTTGGAGGATGAGGTTTCTACCACTTCC  544

seq1  CTCACATGATAAGCCCAAGAAATAATGTATTTTAAAGCCAGGAAGTAGAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATGATAAGCCCAAGAAATAATGTATTTTAAAGCCAGGAAGTAGAT  594

seq1  CCTGATATAAATCTTCATTAAGTTTACTTTGCTTTGCATGAACTTGCAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATATAAATCTTCATTAAGTTTACTTTGCTTTGCATGAACTTGCAAG  644

seq1  CACATGAATAATGCATTCTTTTGTCTAGGGATACATAAGTCTCAATCTAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAATAATGCATTCTTTTGTCTAGGGATACATAAGTCTCAATCTAC  694

seq1  TCCTTTCTGAATGGAACAATACTATTCTACTCCCTAATAGGGATTAGGCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTGAATGGAACAATACTATTCTACTCCCTAATAGGGATTAGGCA  744

seq1  GACTCAAATAGCAGGCACTACAAATACAGTTAGTCTGACCTAAAGCTGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAAATAGCAGGCACTACAAATACAGTTAGTCTGACCTAAAGCTGTT  794

seq1  CCATAATTAGCTCTATTTATCCTTGTGGCCCTTAATGTGAAACTCCTATA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATTAGCTCTATTTATCCTTGTGGCCCTTAATGTGAAACTCCTATA  844

seq1  AGTCCATAGACTCTAACTTTGTATCTGAAACATATGTATGAAGTATAGAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATAGACTCTAACTTTGTATCTGAAACATATGTATGAAGTATAGAA  894

seq1  ACAGACAGCATACACCTTCAGAATGAAAAAAAAATTCCAAAGAATAATCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGCATACACCTTCAGAATGAAAAAAAAATTCCAAAGAATAATCT  944

seq1  ATGCTCATATTACCCTGATATACTTCATTAATCACAGGAGCTAATAAATT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCATATTACCCTGATATACTTCATTAATCACAGGAGCTAATAAATT  994

seq1  ATCGTGCTTTGGGCTCATATTTATTCATAATTAATTATTATTCAACAGTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGCTTTGGGCTCATATTTATTCATAATTAATTATTATTCAACAGTA  1044

seq1  TTAAATGTAAATAGTCCACAACCTCATGAACCCTCAGTACATGAATAGAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGTAAATAGTCCACAACCTCATGAACCCTCAGTACATGAATAGAA  1094

seq1  ATATATTAATGAAGATTCATATAGGTATATATAAAATTGTAATTAGGATA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTAATGAAGATTCATATAGGTATATATAAAATTGTAATTAGGATA  1144

seq1  AGGATTTCAAAGTTAAGAGATGGCCTAATAAGGAGGAATTC  1188
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTCAAAGTTAAGAGATGGCCTAATAAGGAGGAATTC  1185