BAC Information

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BAC

Clone NameB6Ng01-084N14
Chromosome12 (Build37)
Map Location 7,696,873 - 7,789,734
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668380
Downstream geneEG668388, Apob, 1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154, Pum2, F730043H23, Sdc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084N14.bB6Ng01-084N14.g
ACCDH898683DH898684
length1,1801,119
definitionDH898683|Mus musculus domesticus DNA, BAC clone: B6Ng01-084N14, 5' end.DH898684|Mus musculus domesticus DNA, BAC clone: B6Ng01-084N14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,696,873 - 7,698,068)(7,788,596 - 7,789,734)
sequence
gaattctgtttaaatactggttctctcgatcattttaactggaaaataag
ctaggcaagaacggggatctttgtgtgcctctgtcacttctgtataatca
gtgcttgcagcactgagcggggctaagaaatactcctgatgagttagctt
tgttcaaacttcaatcttggcttcgctcaggagaaaactacagtgatctc
gttcccctatgacaagaagttgacaaatccccagctataaaaatatgcta
ggagagttcctaaagattttgtttgttaagtctcttctaactggtggtga
tggggttttaaatagttcagtgtaaaagtaacttttatttgcctgatgta
attctcatgacagaggcttactgctgaataagctcacctgtctcttgttg
aactctccctggctggttcaactcagctgttctggctcgaactcctctcc
aagccaactgattaaatttggcctctcttggcttctcactgaactgttcc
acctggccacaaaccaactctgtctattccttccaatctgactccttccc
attctctggcttcagctgcctctactgttcactgaattgcatgaactcac
aaactcaacactgcactgactttcaattgaccaaactgaactgccttctc
tctccttgtgctgctcttaattagctttttctcctgagagttaggcatat
cctatttctgatacattctgtcaaatctttctctgactcatcattttatc
tgcccttcaattggatgtcattgtttgggatgaaaggtatgtactaacag
tgttaaaagtttgtctgcattcctgttagatcatacagacctggaaggtc
ttaggatgtgatcagagcattcattttgctggattaaaattcctcacctg
ggccttgggaggcagagacaggcagatttctgagttcgaggccagcctgg
tctacaaagtgagttccaggacagccaggctatacagagaaaccctgtct
caaaaaaaaattttttttttttggatcagtacaatctgactatatctgtg
aatcacaagtatgctgatgttaatcactattgtgcacatatgcttattac
ttagataaagtagtgctttttttccgcattgttaacaagttgctaataga
atacctagtaggaaggacttactttggctc

gaattctccaggaagttcatgaaaggagtcagtaaaagcactctccgagg
tatttcacacagttgtaaatatttgtcaaataaccctttagggtgaaaag
gaagctcacctaatgatggtgtgactataaccttgagtcacactgcttag
gtatatatatatatatatttctcatttaaacttcagtctcatttcagggc
tcccaaagatggactatttgttctcttcccaatgttaaataaataaataa
atctttatctgctttccactattaacaaacaaacaagagggcatgacata
ggagagctgaaacctggcatccatgtacatgcacacatatgtgtgtaccc
caccacatgtatgaatatactattcacctttctaaatctaaaataaataa
tatgcctgtactttagcagaaatgaactaaaaactaaaagtagacagtaa
gatataatagtcatacataaaatatctagaaatgaaaagtgtagaattgc
tttacaagaaacagttaagacaatattaaaaaataagtccaaacagttgg
actaatggagagaaatttcatatctaggaatgtataccccagcacataca
tgcatgtgtactccactatatacatgcacacatacatatgtattccacct
cacacatgtggacttcaccacacatgtataaatacaaagtcaaaatgttt
tactaatcctatgaaattcctgcatgtttgtgattgactaatagaaataa
catttactttcaggtaattcaatacctggcaagctcctctgtatgatgca
gagccaaatacagtagtgtctcagatgtgagcttgtagcataatttggaa
taggaactcagagattttatttatatctgtactatagacatgatataaat
atgttagttctctttatgcataaatacattatatatactatacatgtatg
catgtatgtacatatgtatgtattactatgtgtctagagagagttatgaa
atgacagaagtttaagactgatgttttgatgagtggtgatgagagcctgc
agttctaggaagctcacagtgagtagagctgatgctgcagtctgcagtct
ggctagctctacaggagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_7696873_7698068
seq2: B6Ng01-084N14.b_48_1227

seq1  GAATTCTGTTTAAATACTGGTTCTCTCGATCATTTTAACTGGAAAATAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTAAATACTGGTTCTCTCGATCATTTTAACTGGAAAATAAG  50

seq1  CTAGGCAAGAACGGGGATCTTTGTGTGCCTCTGTCACTTCTGTATAATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCAAGAACGGGGATCTTTGTGTGCCTCTGTCACTTCTGTATAATCA  100

seq1  GTGCTTGCAGCACTGAGCGGGGCTAAGAAATACTCCTGATGAGTTAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTGCAGCACTGAGCGGGGCTAAGAAATACTCCTGATGAGTTAGCTT  150

seq1  TGTTCAAACTTCAATCTTGGCTTCGCTCAGGAGAAAACTACAGTGATCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAAACTTCAATCTTGGCTTCGCTCAGGAGAAAACTACAGTGATCTC  200

seq1  GTTCCCCTATGACAAGAAGTTGACAAATCCCCAGCTATAAAAATATGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCCTATGACAAGAAGTTGACAAATCCCCAGCTATAAAAATATGCTA  250

seq1  GGAGAGTTCCTAAAGATTTTGTTTGTTAAGTCTCTTCTAACTGGTGGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTTCCTAAAGATTTTGTTTGTTAAGTCTCTTCTAACTGGTGGTGA  300

seq1  TGGGGTTTTAAATAGTTCAGTGTAAAAGTAACTTTTATTTGCCTGATGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTTTAAATAGTTCAGTGTAAAAGTAACTTTTATTTGCCTGATGTA  350

seq1  ATTCTCATGACAGAGGCTTACTGCTGAATAAGCTCACCTGTCTCTTGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCATGACAGAGGCTTACTGCTGAATAAGCTCACCTGTCTCTTGTTG  400

seq1  AACTCTCCCTGGCTGGTTCAACTCAGCTGTTCTGGCTCGAACTCCTCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCCCTGGCTGGTTCAACTCAGCTGTTCTGGCTCGAACTCCTCTCC  450

seq1  AAGCCAACTGATTAAATTTGGCCTCTCTTGGCTTCTCACTGAACTGTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAACTGATTAAATTTGGCCTCTCTTGGCTTCTCACTGAACTGTTCC  500

seq1  ACCTGGCCACAAACCAACTCTGTCTATTCCTTCCAATCTGACTCCTTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCCACAAACCAACTCTGTCTATTCCTTCCAATCTGACTCCTTCCC  550

seq1  ATTCTCTGGCTTCAGCTGCCTCTACTGTTCACTGAATTGCATGAACTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTGGCTTCAGCTGCCTCTACTGTTCACTGAATTGCATGAACTCAC  600

seq1  AAACTCAACACTGCACTGACTTTCAATTGACCAAACTGAACTGCCTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAACACTGCACTGACTTTCAATTGACCAAACTGAACTGCCTTCTC  650

seq1  TCTCCTTGTGCTGCTCTTAATTAGCTTTTTCTCCTGAGAGTTAGGCATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTGTGCTGCTCTTAATTAGCTTTTTCTCCTGAGAGTTAGGCATAT  700

seq1  CCTATTTCTGATACATTCTGTCAAATCTTTCTCTGACTCATCATTTTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTCTGATACATTCTGTCAAATCTTTCTCTGACTCATCATTTTATC  750

seq1  TGCCCTTCAATTGGATGTCATTGTTTGGGATGAAAGGTATGTACTAACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTTCAATTGGATGTCATTGTTTGGGATGAAAGGTATGTACTAACAG  800

seq1  TGTTAAAAGTTTGTCTGCATTCCTGTTAGATCATACAGACCTGGAAGGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAAGTTTGTCTGCATTCCTGTTAGATCATACAGACCTGGAAGGTC  850

seq1  TTAGGATGTGATCAGAGCATTCATTTTGCTGGATTAAAATTCCTCACCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATGTGATCAGAGCATTCATTTTGCTGGATTAAAATTCCTCACCTG  900

seq1  GGCCTTGGGAGGCAGAGACAGGCAGATTTCTGAGTTCGAGGCCAGCCTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGGGAGGCAGAGACAGGCAGATTTCTGAGTTCGAGGCCAGCCTGG  950

seq1  TCTACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTC  1000
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCTACAAAGTGAGTTCCAGGACAGCCA-GGCTATACAGAGAAACCCTGTC  999

seq1  TCAAAAAAAAAATTTTTTTTTTTTTGGATCAGTACAATCTGACTATTATC  1050
      |||||||||||  |||||||||||||||||||||||||||||||| ||||
seq2  TCAAAAAAAAA--TTTTTTTTTTTTGGATCAGTACAATCTGACTA-TATC  1046

seq1  TTGTGAATTCACAAGTATGCTGATGTTTAATCAACCTTATTGTGCACCAT  1100
       |||||| ||||||||||||||||| |||||||    ||||||||| |||
seq2  -TGTGAA-TCACAAGTATGCTGATG-TTAATCA---CTATTGTGCA-CAT  1089

seq1  ATGCTAATTAC-TAGATAAAGTAGTGCTTTTTTTTTCAGCATTGTAACAA  1149
      ||||| ||||| |||||||||||||||  |||||||| ||||||| |  |
seq2  ATGCTTATTACTTAGATAAAGTAGTGC--TTTTTTTCCGCATTGTTAACA  1137

seq1  AGTAGCTAATAGAAATTACCTAAGTAGGGAAAGACTTACTTTGGCTC  1196
      ||| ||||||||||  ||||| |||| |||| |||||||||||||||
seq2  AGTTGCTAATAGAA--TACCT-AGTA-GGAAGGACTTACTTTGGCTC  1180


seq1: chr12_7788596_7789734
seq2: B6Ng01-084N14.g_67_1185 (reverse)

seq1  TGCTCCTGGGTAGAGCCTAGGCCCAAGACTGCAGACTGCAGCATCAGCTC  50
      |||||||  |||||| ||||   | |||||||||||||||||||||||||
seq2  TGCTCCT--GTAGAG-CTAG---CCAGACTGCAGACTGCAGCATCAGCTC  44

seq1  TTACTTCCAACTTGTGAGCTTTCCCTAGAAACTGCAGGCTCTCCATCACC  100
       ||||  |    |||||||||  ||||| ||||||||||||| |||||||
seq2  -TACTCAC----TGTGAGCTT--CCTAG-AACTGCAGGCTCT-CATCACC  85

seq1  ACTCATCAAAAACATCAGTCTTTAAACTTCCTGTCATTTCATAACTCTCT  150
      ||||||| |||||||||||| |||||||| ||||||||||||||||||||
seq2  ACTCATC-AAAACATCAGTC-TTAAACTT-CTGTCATTTCATAACTCTCT  132

seq1  CTAGACACATAAGTAATACATACATATGTACATACATGCATACATGTATA  200
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTAGACACAT-AGTAATACATACATATGTACATACATGCATACATGTATA  181

seq1  GTATATATAATGTATTTATGCATAAAGAGAACTAAACATATTTATATCAT  250
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GTATATATAATGTATTTATGCATAAAGAGAACT-AACATATTTATATCAT  230

seq1  GTCTATAGTACAGATATAAATAAAATCTCTGAGTTCCTATTCCAAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATAGTACAGATATAAATAAAATCTCTGAGTTCCTATTCCAAATTAT  280

seq1  GCTACAAGCTCACATCTGAGACACTACTGTATTTGGCTCTGCATCATACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAAGCTCACATCTGAGACACTACTGTATTTGGCTCTGCATCATACA  330

seq1  GAGGAGCTTGCCAGGTATTGAATTACCTGAAAGTAAATGTTATTTCTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCTTGCCAGGTATTGAATTACCTGAAAGTAAATGTTATTTCTATT  380

seq1  AGTCAATCACAAACATGCAGGAATTTCATAGGATTAGTAAAACATTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATCACAAACATGCAGGAATTTCATAGGATTAGTAAAACATTTTGA  430

seq1  CTTTGTATTTATACATGTGTGGTGAAGTCCACATGTGTGAGGTGGAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTATTTATACATGTGTGGTGAAGTCCACATGTGTGAGGTGGAATAC  480

seq1  ATATGTATGTGTGCATGTATATAGTGGAGTACACATGCATGTATGTGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTATGTGTGCATGTATATAGTGGAGTACACATGCATGTATGTGCTG  530

seq1  GGGTATACATTCCTAGATATGAAATTTCTCTCCATTAGTCCAACTGTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATACATTCCTAGATATGAAATTTCTCTCCATTAGTCCAACTGTTTG  580

seq1  GACTTATTTTTTAATATTGTCTTAACTGTTTCTTGTAAAGCAATTCTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATTTTTTAATATTGTCTTAACTGTTTCTTGTAAAGCAATTCTACA  630

seq1  CTTTTCATTTCTAGATATTTTATGTATGACTATTATATCTTACTGTCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATTTCTAGATATTTTATGTATGACTATTATATCTTACTGTCTAC  680

seq1  TTTTAGTTTTTAGTTCATTTCTGCTAAAGTACAGGCATATTATTTATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTTTTAGTTCATTTCTGCTAAAGTACAGGCATATTATTTATTTT  730

seq1  AGATTTAGAAAGGTGAATAGTATATTCATACATGTGGTGGGGTACACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAGAAAGGTGAATAGTATATTCATACATGTGGTGGGGTACACACA  780

seq1  TATGTGTGCATGTACATGGATGCCAGGTTTCAGCTCTCCTATGTCATGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGCATGTACATGGATGCCAGGTTTCAGCTCTCCTATGTCATGCC  830

seq1  CTCTTGTTTGTTTGTTAATAGTGGAAAGCAGATAAAGATTTATTTATTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTTTGTTTGTTAATAGTGGAAAGCAGATAAAGATTTATTTATTTA  880

seq1  TTTAACATTGGGAAGAGAACAAATAGTCCATCTTTGGGAGCCCTGAAATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACATTGGGAAGAGAACAAATAGTCCATCTTTGGGAGCCCTGAAATG  930

seq1  AGACTGAAGTTTAAATGAGAAATATATATATATATATACCTAAGCAGTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAAGTTTAAATGAGAAATATATATATATATATACCTAAGCAGTGT  980

seq1  GACTCAAGGTTATAGTCACACCATCATTAGGTGAGCTTCCTTTTCACCCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAAGGTTATAGTCACACCATCATTAGGTGAGCTTCCTTTTCACCCT  1030

seq1  AAAGGGTTATTTGACAAATATTTACAACTGTGTGAAATACCTCGGAGAGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTTATTTGACAAATATTTACAACTGTGTGAAATACCTCGGAGAGT  1080

seq1  GCTTTTACTGACTCCTTTCATGAACTTCCTGGAGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTACTGACTCCTTTCATGAACTTCCTGGAGAATTC  1119


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