BAC Information

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BAC

Clone NameB6Ng01-085E13
Chromosome12 (Build37)
Map Location 13,167,171 - 13,276,254
singlet/doubletdoublet
Overlap geneDdx1
Upstream geneD12Ertd553e, LOC100043215, Mycn, EG668473, LOC628449
Downstream geneLOC627199, LOC627189, LOC100043243, LOC100042396, LOC238091, EG633789, LOC668481, AW125753
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085E13.bB6Ng01-085E13.g
ACCDH899000DH899001
length942345
definitionDH899000|Mus musculus domesticus DNA, BAC clone: B6Ng01-085E13, 5' end.DH899001|Mus musculus domesticus DNA, BAC clone: B6Ng01-085E13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,275,311 - 13,276,254)(13,167,171 - 13,167,515)
sequence
gagccaaggctgactacagaaaccttgagcgagccctggacccggcagcc
ccgccgttgccagcatacaacacagctgctatccccgctccacttgcact
gcgtggcaccgcgacgtggctttacacgccccgcgcccgcgcccgcgcca
tgcctacagccttaaaaagagagcccggctcacctgcacttctgtctcag
gtggccattcggtattgaccagcaagtcatagagaatcgtctcctcctcg
tccgcagagccgggactcaaagccggcgctgactcgggggccgccatgtt
ggccgggaacagagtggtggagggaggggcactacggcgactcgcgcggg
tcatactttcctggacgcggccgctggtgattggcagagtgaaatgaatt
aagtgcggaaagggaatgctaaaaatgacagaaagggaatgctaaacttg
acagatctgtgggtctaagaatggccttgtcttgtatgagatatgtcttg
gaccctggtccactttttgttcatttgtgcctgaaatgagtcaagtcact
gaacttttcttacccagtcagcgtctacgaagctgcaagaacctcccaga
gtgctggtgttcatgtacagattcttctgcaaacacagaacgtgttcgga
gagtggactttaaatgtaccaaggggttattcagttcacaggaagggtgc
tttaggcacctagaaaaaaacagtgaggctgatgaagtctccctgtaaca
aggagagcttgtcagctgtgtaagagaggatgtcctaaaaatcaccatac
aacatggactatcctcagacccagtcctcctgcctcagacccagtcctcc
tgcctgagcctccccagtgctcagagtacagagatgtgccatcagcccag
ccctgggccttcaactataggtagaaattgggttcactggaa
tgaggctggatgattgctatgagctccaggccaatctgagccactcagta
agatccgggccagcctggactacagtgggatcttatctcaaaaacaagca
aacagagctctttctgctaagaaggaccagctcttggtgacatgctgggt
gttttgctaacagattctgtttctctcgatgtcacctctcattagagctg
cttgggaaccatggtccccctggagtgggtgggacaggagctaggcagga
ggcagagataggagagtgcttgttctactaacttcacccaagcacatact
gttaggtatcctcttcttttctggggtgagggtgagggtggaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_13275311_13276254
seq2: B6Ng01-085E13.b_54_995 (reverse)

seq1  TTCCAGTGAACCCAATTTCTACCTATAGTTGAAGGCCCAGGGCTGGGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTCCAGTGAACCCAATTTCTACCTATAGTTGAAGGCCCAGGGCTGGG-CT  49

seq1  GATGGCACATCTCTGTACTCTGAGCACTGGGGAGGCTCAGGCAGGAGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCACATCTCTGTACTCTGAGCACTGGGGAGGCTCAGGCAGGAGGAC  99

seq1  TGGGTCTGAGGCAGGAGGACTGGGTCTGAGGCTAGTCCATGTTGTATGGT  150
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGGTCTGAGGCAGGAGGACTGGGTCTGAGGATAGTCCATGTTGTATGGT  149

seq1  GATTTTTAGGACATCCTCTCTTACACAGCTGACAAGCTCTCCTTGTTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTAGGACATCCTCTCTTACACAGCTGACAAGCTCTCCTTGTTACA  199

seq1  GGGTGTCTTCATCAGCCTCACTGTTTTTTTCTAGGTGCCTAAAGCACCCT  250
      ||| | ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACTTCATCAGCCTCACTGTTTTTTTCTAGGTGCCTAAAGCACCCT  249

seq1  TCCTGTGAACTGAATAACCCCTTGGTACATTTAAAGTCCACTCTCCGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGAACTGAATAACCCCTTGGTACATTTAAAGTCCACTCTCCGAAC  299

seq1  ACGTTCTGTGTTTGCAGAAGAATCTGTACATGAACACCAGCACTCTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTCTGTGTTTGCAGAAGAATCTGTACATGAACACCAGCACTCTGGGA  349

seq1  GGTTCTTGCAGCTTCGTAGACGCTGACTGGGTAAGAAAAGTTCAGTGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTTGCAGCTTCGTAGACGCTGACTGGGTAAGAAAAGTTCAGTGACT  399

seq1  TGACTCATTTCAGGCACAAATGAACAAAAAGTGGACCAGGGTCCAAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCATTTCAGGCACAAATGAACAAAAAGTGGACCAGGGTCCAAGACA  449

seq1  TATCTCATACAAGACAAGGCCATTCTTAGACCCACAGATCTGTCAAGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCATACAAGACAAGGCCATTCTTAGACCCACAGATCTGTCAAGTTT  499

seq1  AGCATTCCCTTTCTGTCATTTTTAGCATTCCCTTTCCGCACTTAATTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCCCTTTCTGTCATTTTTAGCATTCCCTTTCCGCACTTAATTCAT  549

seq1  TTCACTCTGCCAATCACCAGCGGCCGCGTCCAGGAAAGTATGACCCGCGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCTGCCAATCACCAGCGGCCGCGTCCAGGAAAGTATGACCCGCGC  599

seq1  GAGTCGCCGTAGTGCCCCTCCCTCCACCACTCTGTTCCCGGCCAACATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCGCCGTAGTGCCCCTCCCTCCACCACTCTGTTCCCGGCCAACATGG  649

seq1  CGGCCCCCGAGTCAGCGCCGGCTTTGAGTCCCGGCTCTGCGGACGAGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCCCCGAGTCAGCGCCGGCTTTGAGTCCCGGCTCTGCGGACGAGGAG  699

seq1  GAGACGATTCTCTATGACTTGCTGGTCAATACCGAATGGCCACCTGAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACGATTCTCTATGACTTGCTGGTCAATACCGAATGGCCACCTGAGAC  749

seq1  AGAAGTGCAGGTGAGCCGGGCTCTCTTTTTAAGGCTGTAGGCATGGCGCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGCAGGTGAGCCGGGCTCTCTTTTTAAGGCTGTAGGCATGGCGCG  799

seq1  GGCGCGGGCGCGGGGCGTGTAAAGCCACGTCGCGGTGCCACGCAGTGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCGGGCGCGGGGCGTGTAAAGCCACGTCGCGGTGCCACGCAGTGCAA  849

seq1  GTGGAGCGGGGATAGCAGCTGTGTTGTCTCCTGGCAACGGCGGGGCTGCC  900
      ||||||||||||||||||||||||||| | ||||||||||||||||||||
seq2  GTGGAGCGGGGATAGCAGCTGTGTTGTATGCTGGCAACGGCGGGGCTGCC  899

seq1  GGGTCCAGGGCTCGCTGAAGGGTGTCTGTAGTCAGCCTTGGCTC  944
      |||||||||||||||| || ||| ||||||||||||||||||||
seq2  GGGTCCAGGGCTCGCTCAA-GGTTTCTGTAGTCAGCCTTGGCTC  942

seq1: chr12_13167171_13167515
seq2: B6Ng01-085E13.g_76_420

seq1  TGAGGCTGGATGATTGCTATGAGCTCCAGGCCAATCTGAGCCACTCAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTGGATGATTGCTATGAGCTCCAGGCCAATCTGAGCCACTCAGTA  50

seq1  AGATCCGGGCCAGCCTGGACTACAGTGGGATCTTATCTCAAAAACAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCGGGCCAGCCTGGACTACAGTGGGATCTTATCTCAAAAACAAGCA  100

seq1  AACAGAGCTCTTTCTGCTAAGAAGGACCAGCTCTTGGTGACATGCTGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGCTCTTTCTGCTAAGAAGGACCAGCTCTTGGTGACATGCTGGGT  150

seq1  GTTTTGCTAACAGATTCTGTTTCTCTCGATGTCACCTCTCATTAGAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCTAACAGATTCTGTTTCTCTCGATGTCACCTCTCATTAGAGCTG  200

seq1  CTTGGGAACCATGGTCCCCCTGGAGTGGGTGGGACAGGAGCTAGGCAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAACCATGGTCCCCCTGGAGTGGGTGGGACAGGAGCTAGGCAGGA  250

seq1  GGCAGAGATAGGAGAGTGCTTGTTCTACTAACTTCACCCAAGCACATACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGATAGGAGAGTGCTTGTTCTACTAACTTCACCCAAGCACATACT  300

seq1  GTTAGGTATCCTCTTCTTTTCTGGGGTGAGGGTGAGGGTGGAAGT  345
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGTATCCTCTTCTTTTCTGGGGTGAGGGTGAGGGTGGAAGT  345