BAC Information

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BAC

Clone NameB6Ng01-086O22
Chromosome12 (Build37)
Map Location 119,982,791 - 120,144,259
singlet/doubletdoublet
Overlap geneEG668615, LOC620665, Sp8, Abcb5
Upstream geneRapgef5, Cdca7l, Dnahc11, Sp4, LOC100042993, LOC668611
Downstream geneItgb8, EG627557, LOC100043011, 4732474O15Rik, LOC668632, LOC668633
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086O22.bB6Ng01-086O22.g
ACCDH900198DH900199
length1,0411,134
definitionDH900198|Mus musculus domesticus DNA, BAC clone: B6Ng01-086O22, 5' end.DH900199|Mus musculus domesticus DNA, BAC clone: B6Ng01-086O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,982,791 - 119,983,834)(120,143,122 - 120,144,259)
sequence
gaattctttaagggcaggaagcatgtttcctgcccctctgtacacactat
ggtatataacagcaataaatgcctcttacagaaaatgaaagcaaagctta
cctgagctcgtagttcatgacaaagacatcattaagcaaatactctgtca
tttatctggtgggataaaaatattacttcttttaaaatagttaataaatt
atcttcttcaaatcaaatagaataatacatgttaagttataactctttgt
tataaattttattggtagtacaaagataaaacattttgcctcacatgtag
aagatattttaatatgtaatagtgatattttatattcaaatcttctactt
tcacactataattttttttttaccccaggaacagttagacacacagaatc
tggtaactggtgggaatctagtttctgtgaagtgcgaagacaaacaaatg
aagcccccaggagagcaagagtgttcatatttttattccgtaagcacttt
tacttcttcttgcctaaactgagtttgagttccatgctcaccccattgac
aggcaatgaggaggcagttggtggctttacaggagctcctacctggtccc
ttttttttttttttttttttttggtgatgttagctgcacatactgagttg
aatgatgcgagttatgaacatgaaattgcctagaaagcccaagaaccttg
gcaaacattcacaaagcagcgcacaatgctttaatgcagctaaatgattt
aatgacaaggagggaattactgtaaaatataatgctgggccttggctata
acagcgcctgctgtctagactaagaaatccaaaatggattccaggaggaa
gcacaatgccaggctgtgcgcgcttgcctggtcctcctatactgttatta
ctgttcacagtcctgaatctgaatggcagtggcctgagcctttcaaaaga
cagaaagaagtcaattttttgtatgagaaatggaagtggttggcgccgga
gatcacctgaccttaacagtttcttgtgagaatgaaggagc
gaattcttatgagcatattcttctaataaacacatatcctgggtctggag
aaatagttcaacaattaagaatgcatactgctcttctaataaacctgagt
tcagttcccagaatccacatcaggtggctcacaaccacctttaattttga
ctctaaagactatgaacatctctggtttctgaaagaactgcactcgaatg
cacatacccatgtgcacacacacacacacacacacacacacacacacgag
agagagagagagagagagagagagagagagagttaaagtcttaaaaatcc
aaattatgaagtttcaaaataagaggtttcagatctactagtattcattg
cattcatcttccctttgatgcacaatgttatttcaggggatgaaaaagaa
agatcacatgttaaaactgaaaatgagagttgtgaactctggcatcccag
aatacccttgcaggactcactaatgtcctaaggtctcatccatgggccag
agaaggtttttctctcctcattcaaaaactttccaggctctcagctgctg
tggagaaagttgccaatcacataacatttgtgtgcctggggtcacactcc
tgcaaatggccagtggctcttggaaatagctgaactaggcggatcaagtt
ctaatctcccaccagggcaagtctggcatctgaggtagatggggttctcc
taagagcccataatcattgagccttgcttcaccttctatcagcagagctg
gtgggaaaagtatcctgcctgtcaattgtttttcagaaacaaaattacta
tcgttccagggcaattgtcaaaatcagtttttacatctttttagcagtct
tgaggctaccatgcaatgaattccgtggcccatgttctgcagtacacagc
ttccagcagtgggtgccatcatgttctatgtgcagaaaagtcctggctca
gagcttttcccccacatagaaaatatcctctatctaaaaacatttaaaaa
aaaagaatgtaacacctgccatgtaattctcggtaatttctaatttctta
ctataacaccttatgcctccaccctcaatcttaattaatgtgggacagta
agtactaaacttaattccaaccttcacttaccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_119982791_119983834
seq2: B6Ng01-086O22.b_49_1089

seq1  GAATTCTTTAAGGGCAGGAAGCATGTTTCCTGCCCCTCTGTACACACTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAGGGCAGGAAGCATGTTTCCTGCCCCTCTGTACACACTAT  50

seq1  GGTATATAACAGCAATAAATGCCTCTTACAGAAAATGAAAGCAAAGCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATAACAGCAATAAATGCCTCTTACAGAAAATGAAAGCAAAGCTTA  100

seq1  CCTGAGCTCGTAGTTCATGACAAAGACATCATTAAGCAAATACTCTGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCTCGTAGTTCATGACAAAGACATCATTAAGCAAATACTCTGTCA  150

seq1  TTTATCTGGTGGGATAAAAATATTACTTCTTTTAAAATAGTTAATAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTGGTGGGATAAAAATATTACTTCTTTTAAAATAGTTAATAAATT  200

seq1  ATCTTCTTCAAATCAAATAGAATAATACATGTTAAGTTATAACTCTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTTCAAATCAAATAGAATAATACATGTTAAGTTATAACTCTTTGT  250

seq1  TATAAATTTTATTGGTAGTACAAAGATAAAACATTTTGCCTCACATGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTTTATTGGTAGTACAAAGATAAAACATTTTGCCTCACATGTAG  300

seq1  AAGATATTTTAATATGTAATAGTGATATTTTATATTCAAATCTTCTACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTTTAATATGTAATAGTGATATTTTATATTCAAATCTTCTACTT  350

seq1  TCACACTATAATTTTTTTTTTACCCCAGGAACAGTTAGACACACAGAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTATAATTTTTTTTTTACCCCAGGAACAGTTAGACACACAGAATC  400

seq1  TGGTAACTGGTGGGAATCTAGTTTCTGTGAAGTGCGAAGACAAACAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAACTGGTGGGAATCTAGTTTCTGTGAAGTGCGAAGACAAACAAATG  450

seq1  AAGCCCCCAGGAGAGCAAGAGTGTTCATATTTTTATTCCGTAAGCACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCCCAGGAGAGCAAGAGTGTTCATATTTTTATTCCGTAAGCACTTT  500

seq1  TACTTCTTCTTGCCTAAACTGAGTTTGAGTTCCATGCTCACCCCATTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTTCTTGCCTAAACTGAGTTTGAGTTCCATGCTCACCCCATTGAC  550

seq1  AGGCAATGAGGAGGCAGTTGGTGGCTTTACAGGAGCTCCTACCTGGTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATGAGGAGGCAGTTGGTGGCTTTACAGGAGCTCCTACCTGGTCCC  600

seq1  TTTTTTTTTTTTTTTTTTTTTTGGTGATGTTAGCTGCACATACTGAGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTGGTGATGTTAGCTGCACATACTGAGTTG  650

seq1  AATGATGCGAGTTATGAACATGAAATTGCCTAGAAAGCCCAAGAACCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGCGAGTTATGAACATGAAATTGCCTAGAAAGCCCAAGAACCTTG  700

seq1  GCAAACATTCACAAAGCAGCGCACAATGCTTTAATGCAGCTAAATGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACATTCACAAAGCAGCGCACAATGCTTTAATGCAGCTAAATGATTT  750

seq1  AATGACAAGGAGGGAATTACTGTAAAATATAATGCTGGGCCTTGGCTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAAGGAGGGAATTACTGTAAAATATAATGCTGGGCCTTGGCTATA  800

seq1  ACAGCGCCTGCTGTCTAGACTAAGAAATCCAAAATGGATTCCAGGAGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGCCTGCTGTCTAGACTAAGAAATCCAAAATGGATTCCAGGAGGAA  850

seq1  GCACAATGCCAGGCTGTGGCGCGCTTGCCTGGTCCTCCTATACTGTTATT  900
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GCACAATGCCAGGCTGT-GCGCGCTTGCCTGGTCCTCCTATACTGTTATT  899

seq1  ACTGTTCAACAGTCCTGAAATCTGAATGGCAGTGGCCTGAGCCCTTTCAA  950
      ||||||| ||||||||| ||||||||||||||||||||||| ||||||||
seq2  ACTGTTC-ACAGTCCTG-AATCTGAATGGCAGTGGCCTGAG-CCTTTCAA  946

seq1  AAGACAGAAAGAAGGTCAATTTTTGTAATGAGGAAATGGAAGTGG-TGGC  999
      ||||||||||||| ||||||||||   |||| ||||||||||||| ||||
seq2  AAGACAGAAAGAA-GTCAATTTTTTGTATGA-GAAATGGAAGTGGTTGGC  994

seq1  GCCGGAGATCA-CTGACCCTTACAGTTTCTTGTGAG-ATGAAGGAGC  1044
      ||||||||||| |||||| | ||||||||||||||| ||||||||||
seq2  GCCGGAGATCACCTGACCTTAACAGTTTCTTGTGAGAATGAAGGAGC  1041

seq1: chr12_120143122_120144259
seq2: B6Ng01-086O22.g_66_1199 (reverse)

seq1  ATGGTAAGTTAGAAGGTGTGAATTATAGTTTTAGTTAATTACTGTCTCAC  50
      |||||||||  ||||||  |||||| || ||||| || |||||||| |||
seq2  ATGGTAAGT--GAAGGTTGGAATTA-AG-TTTAG-TACTTACTGTCCCAC  45

seq1  ATTAATTAAGATTTGAGGTGGAGGCATAAGGTGTTAATAAGTAAAGAAAT  100
      |||||||||||||   ||||||||||||||||||||   |||||  || |
seq2  ATTAATTAAGATTGAGGGTGGAGGCATAAGGTGTTA--TAGTAAGAAATT  93

seq1  AGAAATTTACCGAGAATTACAT-GCAGGTGTTACAT--CTTTTTTTTAAA  147
      ||||| |||||||||||||||| |||||||||||||   |||||||||||
seq2  AGAAA-TTACCGAGAATTACATGGCAGGTGTTACATTCTTTTTTTTTAAA  142

seq1  TTGTTTTAGATTAGAGGATA-TTTCTAT-TGTGGGGAAAGCTCTGAGCCA  195
      |  ||||||| ||||||||| ||||||| || ||| ||||||||||||||
seq2  TGTTTTTAGA-TAGAGGATATTTTCTATGTGGGGGAAAAGCTCTGAGCCA  191

seq1  GGACTTTTCTGCACATAGAACATGATGGCACCCACTGCTGGAAGCTGTGT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTTCTGCACATAGAACATGATGGCACCCACTGCTGGAAGCTGTGT  241

seq1  ACTGCAGAACATGGGCCACGGAATTCATTGCATGGTAGCCTCAAGACTGC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGAACATGGGCCACGGAATTCATTGCATGGTAGCCTCAAGACTGC  291

seq1  TAAAAAGATGTAAAAACTGATTTTGACAATTGCCCTGGAACGATAGTAAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGATGTAAAAACTGATTTTGACAATTGCCCTGGAACGATAGTAAT  341

seq1  TTTGTTTCTGAAAAACAATTGACAGGCAGGATACTTTTCCCACCAGCTCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCTGAAAAACAATTGACAGGCAGGATACTTTTCCCACCAGCTCT  391

seq1  GCTGATAGAAGGTGAAGCAAGGCTCAATGATTATGGGCTCTTAGGAGAAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATAGAAGGTGAAGCAAGGCTCAATGATTATGGGCTCTTAGGAGAAC  441

seq1  CCCATCTACCTCAGATGCCAGACTTGCCCTGGTGGGAGATTAGAACTTGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTACCTCAGATGCCAGACTTGCCCTGGTGGGAGATTAGAACTTGA  491

seq1  TCCGCCTAGTTCAGCTATTTCCAAGAGCCACTGGCCATTTGCAGGAGTGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCCTAGTTCAGCTATTTCCAAGAGCCACTGGCCATTTGCAGGAGTGT  541

seq1  GACCCCAGGCACACAAATGTTATGTGATTGGCAACTTTCTCCACAGCAGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCAGGCACACAAATGTTATGTGATTGGCAACTTTCTCCACAGCAGC  591

seq1  TGAGAGCCTGGAAAGTTTTTGAATGAGGAGAGAAAAACCTTCTCTGGCCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCCTGGAAAGTTTTTGAATGAGGAGAGAAAAACCTTCTCTGGCCC  641

seq1  ATGGATGAGACCTTAGGACATTAGTGAGTCCTGCAAGGGTATTCTGGGAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGAGACCTTAGGACATTAGTGAGTCCTGCAAGGGTATTCTGGGAT  691

seq1  GCCAGAGTTCACAACTCTCATTTTCAGTTTTAACATGTGATCTTTCTTTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGTTCACAACTCTCATTTTCAGTTTTAACATGTGATCTTTCTTTT  741

seq1  TCATCCCCTGAAATAACATTGTGCATCAAAGGGAAGATGAATGCAATGAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCCTGAAATAACATTGTGCATCAAAGGGAAGATGAATGCAATGAA  791

seq1  TACTAGTAGATCTGAAACCTCTTATTTTGAAACTTCATAATTTGGATTTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGTAGATCTGAAACCTCTTATTTTGAAACTTCATAATTTGGATTTT  841

seq1  TAAGACTTTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTTTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGT  891

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACATGGGTATGTGCATTCGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACATGGGTATGTGCATTCGA  941

seq1  GTGCAGTTCTTTCAGAAACCAGAGATGTTCATAGTCTTTAGAGTCAAAAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTTCTTTCAGAAACCAGAGATGTTCATAGTCTTTAGAGTCAAAAT  991

seq1  TAAAGGTGGTTGTGAGCCACCTGATGTGGATTCTGGGAACTGAACTCAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGGTTGTGAGCCACCTGATGTGGATTCTGGGAACTGAACTCAGG  1041

seq1  TTTATTAGAAGAGCAGTATGCATTCTTAATTGTTGAACTATTTCTCCAGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGAAGAGCAGTATGCATTCTTAATTGTTGAACTATTTCTCCAGA  1091

seq1  CCCAGGATATGTGTTTATTAGAAGAATATGCTCATAAGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGATATGTGTTTATTAGAAGAATATGCTCATAAGAATTC  1134