BAC Information

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BAC

Clone NameB6Ng01-087F11
Chromosome12 (Build37)
Map Location 120,967,188 - 120,968,381
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668615, LOC620665, Sp8, Abcb5, Itgb8, EG627557, LOC100043011, 4732474O15Rik, LOC668632
Downstream geneLOC668633, Gm528, LOC100043017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087F11.bB6Ng01-087F11.g
ACCDH900494DH900495
length1,1631,205
definitionDH900494|Mus musculus domesticus DNA, BAC clone: B6Ng01-087F11, 5' end.DH900495|Mus musculus domesticus DNA, BAC clone: B6Ng01-087F11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtagggattgtatatcagatatttacattacagtttataacag
tagcaaaattacagttgtgaagtagcaacgaaataattttatgattaggg
gtcatcacaacatgaggaattgtattaaaatgttgcctcagtagaatggt
tgagagctactaatccagagtaggactatttcaatgttgtgatttgttgc
gaccattagttatattaataaaaaaaatagtccaaatgatcagccaaaga
agacaagtaaaaatttaataaaattatctaccctttaaaaagaatagcta
acatagtcactgaaagaaatatgcttctgatccatagttacatgaacaaa
agtatatttctgtcctcctatttgcagggatcaagtgtgtaaatgagcat
ggaaagcaacagtatatgccaagcccactaaaatctgaagaaacacaata
accaggtcttcttaaatcatgagagaagggaggtcagtgatcaaaccaca
gtcctcaaaatctgagggatggacggatacagaaaatcacatactgccca
gcagaaaccataaatgcaggtctctatgggaatcagagcagaaatcatca
tagaaatttgcacctgaatgtgattctcagactgccatggaatctctagt
ggctcagtgtgtacagggatgctcagccacttctgtgtgttttgctttga
gcaatcaccctcaattctctcagggaatatttgggaaatactctaggact
tcaactaggtaaagaatgaagtaacttctgaaatacactgaaatagtctg
ttcttcctgaaaaggtctgaactgagggaaaaccatttttaccagagctt
accctacacttttgtgtttgttttgtttctgtcttttttcccaaacctca
cttacctgtggaaggaaatccccagattcgccctcttaacattgcatatc
cccagtggtatgaagctaatgctgagaacactggtaaacttcacagccca
gagacatgactcaactactgtagtaagaacatcctacctccagcaggata
tcacacatactaaaatggcagatgaacaaagcaacactaaaaggcagtcg
atgacaagagagattttttttttcatattttatacgtatttcctcataca
tttcaatgctatc
gaattctttagaggaggaaaagcaatttgtctctagtctctagctctgta
tttgcgttgcttattatgtcttgatcttccagcaccattataatgaatgt
gtttcttagcatgacattacttttgatcaaggagctctcatttgtcatac
tctggcagagtctctcaggagacagctatatcaggctcctgtcagcgagc
acttttggcatccacaatattgtctgtatttggtgactgtatacgggatg
gattcgcaagtggggcagtctcaggatggcctttccttcattcttggctc
cacactttgtctccttatacgttcccgtattttgttcccctcacattggt
cacaaaacaggcctcaagagataccagaagattgaaataatcccatgcaa
tctatcagatcaccagagactaaggatggtcttcaataacaacaaaacca
acaggaagtccacatacacatggaagctgaacaatgctctactcacaact
tggtcaaagaagaaataaagaaagaaattaaaggctttttagaatttaat
gaaaatgaaggcacataatacctaaacttacagggcacaatgaaagcagt
gctaagagaaaaacccatagctctaagtgccttcaaaaagaaactggaga
gagcatacattgcaacttgaaagcacacctgaaatatctagaatcaaaag
aagcaaatacgcccaagaggagtacacaacaggaaataaactcagggctg
aaatcatccaagtaggaataaaaaccaaaaaaaccaaaacaaacaaacaa
acaaacaaacaaacaaaaaaaaacaaaaaaaaaaacccaactatacaaag
aatcaacaaacccaggagctggatctttgagagaatcaacagataggtaa
acccttagccagactcacagagggcacagagacagtatccaactaataaa
tcagaaattaaaaggagacgttgttgtgtaaatctctcatcccaaatata
ccctgcatgagacacaatatatgaatacatgctgtgtgctagatgagcag
atctaccactacactacatctccaagcttatgagacccctaagaacctgc
aggttctcaggcatgtgctctcgctccagttctctttcctctccgtgtcc
ctgctcattccattcccttacttcgtcacgtcctttatctgcctaatacc
acagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_120967188_120968381
seq2: B6Ng01-087F11.b_47_1209

seq1  GAATTCTGTAGGGATTGTATATCAGATATTTACATTACAGTTTATAACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGGGATTGTATATCAGATATTTACATTACAGTTTATAACAG  50

seq1  TAGCAAAATTACAGTTGTGAAGTAGCAACGAAATAATTTTATGATTAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAATTACAGTTGTGAAGTAGCAACGAAATAATTTTATGATTAGGG  100

seq1  GTCATCACAACATGAGGAATTGTATTAAAATGTTGCCTCAGTAGAATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCACAACATGAGGAATTGTATTAAAATGTTGCCTCAGTAGAATGGT  150

seq1  TGAGAGCTACTAATCCAGAGTAGGACTATTTCAATGTTGTGATTTGTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCTACTAATCCAGAGTAGGACTATTTCAATGTTGTGATTTGTTGC  200

seq1  GACCATTAGTTATATTAATAAAAAAAATAGTCCAAATGATCAGCCAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATTAGTTATATTAATAAAAAAAATAGTCCAAATGATCAGCCAAAGA  250

seq1  AGACAAGTAAAAATTTAATAAAATTATCTACCCTTTAAAAAGAATAGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGTAAAAATTTAATAAAATTATCTACCCTTTAAAAAGAATAGCTA  300

seq1  ACATAGTCACTGAAAGAAATATGCTTCTGATCCATAGTTACATGAACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTCACTGAAAGAAATATGCTTCTGATCCATAGTTACATGAACAAA  350

seq1  AGTATATTTCTGTCCTCCTATTTGCAGGGATCAAGTGTGTAAATGAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATTTCTGTCCTCCTATTTGCAGGGATCAAGTGTGTAAATGAGCAT  400

seq1  GGAAAGCAACAGTATATGCCAAGCCCACTAAAATCTGAAGAAACACAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCAACAGTATATGCCAAGCCCACTAAAATCTGAAGAAACACAATA  450

seq1  ACCAGGTCTTCTTAAATCATGAGAGAAGGGAGGTCAGTGATCAAACCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTCTTCTTAAATCATGAGAGAAGGGAGGTCAGTGATCAAACCACA  500

seq1  GTCCTCAAAATCTGAGGGATGGACGGATACAGAAAATCACATACTGCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAAAATCTGAGGGATGGACGGATACAGAAAATCACATACTGCCCA  550

seq1  GCAGAAACCATAAATGCAGGTCTCTATGGGAATCAGAGCAGAAATCATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAACCATAAATGCAGGTCTCTATGGGAATCAGAGCAGAAATCATCA  600

seq1  TAGAAATTTGCACCTGAATGTGATTCTCAGACTGCCATGGAATCTCTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTTGCACCTGAATGTGATTCTCAGACTGCCATGGAATCTCTAGT  650

seq1  GGCTCAGTGTGTACAGGGATGCTCAGCCACTTCTGTGTGTTTTGCTTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGTGTGTACAGGGATGCTCAGCCACTTCTGTGTGTTTTGCTTTGA  700

seq1  GCAATCACCCTCAATTCTCTCAGGGAATATTTGGGAAATACTCTAGGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCACCCTCAATTCTCTCAGGGAATATTTGGGAAATACTCTAGGACT  750

seq1  TCAACTAGGTAAAGAATGAAGTAACTTCTGAAATACACTGAAATAGTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTAGGTAAAGAATGAAGTAACTTCTGAAATACACTGAAATAGTCTG  800

seq1  TTCTTCCTGAAAAGGTCTGAACTGAGGGAAAACCATTTTTACCAGAGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTGAAAAGGTCTGAACTGAGGGAAAACCATTTTTACCAGAGCTT  850

seq1  ACCCTACACTTTTGTGTTTGTTTTGTTTCTGTCTTTTTTCCCAAACCTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTACACTTTTGTGTTTGTTTTGTTTCTGTCTTTTTTCCCAAACCTCA  900

seq1  CTTACCTGTGGAAGGGAAATCCCCAGATTCGCCCTCTTAACATTGCATAT  950
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTTACCTGTGGAA-GGAAATCCCCAGATTCGCCCTCTTAACATTGCATAT  949

seq1  CCCCAGTGGTATGAAGGCTAATGCTGAGAAACACTGGTAAACTTCACAGC  1000
      ||||||||||||||| |||||||||||| |||||||||||||||||||||
seq2  CCCCAGTGGTATGAA-GCTAATGCTGAG-AACACTGGTAAACTTCACAGC  997

seq1  CCAGAGACATGGACTCAACTACTGTAGTAAAGAACATCCTACCTCCCAGC  1050
      |||||||||| ||||||||||||||||| ||||||||||||||| |||||
seq2  CCAGAGACAT-GACTCAACTACTGTAGT-AAGAACATCCTACCT-CCAGC  1044

seq1  ACAAAAATAAAACACAACATACTAAAAATGGCAGGATGAACAAAAGCAAC  1100
           |  | | ||| ||||||| ||||||||| ||||||| ||||||||
seq2  -----AGGATATCAC-ACATACT-AAAATGGCA-GATGAAC-AAAGCAAC  1085

seq1  ACTAAAAGGCAGTTCAGATGACAAAAGAAGAAAGATCTTTTTTTTTTCAT  1150
      |||||||||||||   ||||||     |||| |||  |||||||||||||
seq2  ACTAAAAGGCAGT--CGATGAC-----AAGAGAGA--TTTTTTTTTTCAT  1126

seq1  ATTTTTTATTACGTATTTTCCTCAATTACATTTCCAATGCTATC  1194
      |||||    |||||| ||||||||  ||||||| ||||||||||
seq2  ATTTT---ATACGTA-TTTCCTCA--TACATTT-CAATGCTATC  1163