BAC Information

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BAC

Clone NameB6Ng01-087P19
Chromosome12 (Build37)
Map Location 4,204,991 - 4,206,110
singlet/doubletsinglet
Overlap geneAdcy3
Upstream geneEG668274, LOC100041946, 1700012B15Rik, Rab10, Kif3c, LOC100043040, Asxl2, LOC627245, Dtnb, LOC668197, Dnmt3a, LOC668289, Pomc1, C030014M07Rik, C330021A05Rik
Downstream geneCenpo, 2410017P09Rik, Ncoa1, LOC100041995, LOC100042005, LOC100042014, Itsn2, 4930417G10Rik, A830093I24Rik, Pfn4, EG626534, 0610009D07Rik, Fkbp1b, BC068281, Gm1964, Ubxd4, Atad2b, LOC668332, Klhl29
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087P19.bB6Ng01-087P19.g
ACCDH900964DH900965
length1,2021,106
definitionDH900964|Mus musculus domesticus DNA, BAC clone: B6Ng01-087P19, 5' end.DH900965|Mus musculus domesticus DNA, BAC clone: B6Ng01-087P19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctactgaattccaagctcataggcttcaaggattttctaggata
ctggaacactggtggaaccttacctatgtcaaaaatcaatctttaaaggc
acttataacaaaaaaatactgaaagagagcatacatcatactaatgcggg
aacagggtttgagtatgcggactatgagaatgccagggttccaggaggca
tagtttccttgaaactctttgccttgtgactgcctctaggcctttcgacc
caacaggccacttcactggagtgggcgtagcacctgggttctatgagaaa
gcaagctgagtaagccacaggaagcaagccagtaagtaacatccctccat
ggcctctgcatcagctcctgcttcctgatctgcttgagttccaatcctga
cttcctttggtgctgaacagcaatgcagaagtgtaagctgaatagatcct
ttcttttctccccaacttgcttcttggtcataatgtttgtgcaggagtag
aatccctgactaagataggtgccattaggcagccatttgggttgattatc
taagggctattgaggccacatttgactgcaaaagtgaataaatttagggc
ccttcaggtgtgtcagatatagaggctggagactttctaaaggcatccca
aggggcaatgagctggtatggaagacactgttcccatggatgagagaggg
gaaggaaaaatgtcacttcaacctgtgaaagaactcagtggggaaacccc
cactcagctcctgattcggcgtgcacccaagaatcacgaatagaacacaa
caccttgatgtaacaagaggttttttaatggcggagctccgggtcgaaac
gtatctcacataacaggagacagtggattcgaccacgaggcttggaagct
aggggtttttatagaaaaggagtggggctgggggaggaattggcgcggtt
tcacatgattggtccatttaaacatcagcagcctgtacatttaactagtc
agaggggtgggagctaggagcgatgggcttgcccgggcatgtctgtcttg
ttctcagcccagttcaagctcagaaaacaactcttggctattaacataca
tacattcaatacagcttaattctacactgtagcctgcgtgttcaggtcag
ggagacctagagaaatcatggcatttatggctatacacttcattacaggt
tg
gaattcaggaaacttccaaggttgacttaggtcttcgtagccccttcctt
cccacggtccagtatgccgagtccacagctaggtggaccaacatcatctg
tggctccacacatagggattaaagttcagaaaggtttgtttgcttgtttt
aggtcacatagtaatagtcaaaaattgaagcagtttcagtgtccgggaga
tagctcagttagtaaacagcttgggacctgagttccttcctcagaatgcg
tgaaaaaagccaggcatggtggtctaatgctcatagtctcagtgatggga
agcagagacactaggatctctgggattcactggctggcaaacttatttac
tgacttgttctgggccaagggagacctagtctcaaaaacaaaatcaatca
atcaatcaaacaagcagatatcactgatggaatgacacaggagattgttc
tagctcccaaaagtacatacatcttgtgtatatgcatgcacacatgtgag
atgtctctgtgatctaaggatgcatgagctgtgttccctgaagcatagcc
tgtgtggggatccactgggctgagagggtgggcccatttcatcaggtagc
cctcctacattcctaggtggctgggcagggacacagcctcacagggccta
ggagatctctggggaggccatcttctgttctgctgggttcgtggagagct
agggttctgtgagagggcagctagatgctctgtgagggaaagaggacagg
gaaaggtcacttttcccttcagtcaatatggactaatttggacataccga
atgcactctcctaagtcctcttaggaatgttgtatagtacttgctgtaat
ttagcaacctatgcacgggagtaaaatgagcctagatacttactctggaa
gtactagaagtggaaagctgtagggctgtactggacacctacctggtcag
gacagctcagagcacaggagtctgtgggtcacatagtgtctaccatgcag
atgacgcccctgatcccatgatcaggactggacagtgcacaggatccacc
tgcacccctgccataatgcaggcggtacccaaggctaggtgagatgcaag
ttatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_4204991_4206110
seq2: B6Ng01-087P19.g_68_1173

seq1  GAATTCAGGAAACTTCCAAGGTTGACTTAGGTCTTCGTAGCCCCTTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAACTTCCAAGGTTGACTTAGGTCTTCGTAGCCCCTTCCTT  50

seq1  CCCACGGTCCAGTATGCCGAGTCCACAGCTAGGTGGACCAACATCATCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGGTCCAGTATGCCGAGTCCACAGCTAGGTGGACCAACATCATCTG  100

seq1  TGGCTCCACACATAGGGATTAAAGTTCAGAAAGGTTTGTTTGCTTGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCCACACATAGGGATTAAAGTTCAGAAAGGTTTGTTTGCTTGTTTT  150

seq1  AGGTCACATAGTAATAGTCAAAAATTGAAGCAGTTTCAGTGTCCGGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACATAGTAATAGTCAAAAATTGAAGCAGTTTCAGTGTCCGGGAGA  200

seq1  TAGCTCAGTTAGTAAACAGCTTGGGACCTGAGTTCCTTCCTCAGAATGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCAGTTAGTAAACAGCTTGGGACCTGAGTTCCTTCCTCAGAATGCG  250

seq1  TGAAAAAAGCCAGGCATGGTGGTCTAATGCTCATAGTCTCAGTGATGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAAGCCAGGCATGGTGGTCTAATGCTCATAGTCTCAGTGATGGGA  300

seq1  AGCAGAGACACTAGGATCTCTGGGATTCACTGGCTGGCAAACTTATTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGACACTAGGATCTCTGGGATTCACTGGCTGGCAAACTTATTTAC  350

seq1  TGACTTGTTCTGGGCCAAGGGAGACCTAGTCTCAAAAACAAAATCAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGTTCTGGGCCAAGGGAGACCTAGTCTCAAAAACAAAATCAATCA  400

seq1  ATCAATCAAACAAGCAGATATCACTGATGGAATGACACAGGAGATTGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCAAACAAGCAGATATCACTGATGGAATGACACAGGAGATTGTTC  450

seq1  TAGCTCCCAAAAGTACATACATCTTGTGTATATGCATGCACACATGTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCCCAAAAGTACATACATCTTGTGTATATGCATGCACACATGTGAG  500

seq1  ATGTCTCTGTGATCTAAGGATGCATGAGCTGTGTTCCCTGAAGCATAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCTGTGATCTAAGGATGCATGAGCTGTGTTCCCTGAAGCATAGCC  550

seq1  TGTGTGGGGATCCACTGGGCTGAGAGGGTGGGCCCATTTCATCAGGTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGGGATCCACTGGGCTGAGAGGGTGGGCCCATTTCATCAGGTAGC  600

seq1  CCTCCTACATTCCTAGGTGGCTGGGCAGGGACACAGCCTCACAGGGCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTACATTCCTAGGTGGCTGGGCAGGGACACAGCCTCACAGGGCCTA  650

seq1  GGAGATCTCTGGGGAGGCCATCTTCTGTTCTGCTGGGTTCGTGGAGAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATCTCTGGGGAGGCCATCTTCTGTTCTGCTGGGTTCGTGGAGAGCT  700

seq1  AGGGTTCTGTGAGAGGGCAGCTAGATGCTCTGTGAGGGAAAGAGGACAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTCTGTGAGAGGGCAGCTAGATGCTCTGTGAGGGAAAGAGGACAGG  750

seq1  G-AAGGTCACTTTTCCCTTCAGTCAATATGGACTAATTTGGACATACCGA  799
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTCACTTTTCCCTTCAGTCAATATGGACTAATTTGGACATACCGA  800

seq1  ATGCACTCTCCTAAGTCCTCTTAGGAATGTTGTATAGTACTTGCTGTAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTCTCCTAAGTCCTCTTAGGAATGTTGTATAGTACTTGCTGTAAT  850

seq1  TTAGCAACCTATGCACGGGAGTAAAATGAGCCTAGATACTTACTCTGGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAACCTATGCACGGGAGTAAAATGAGCCTAGATACTTACTCTGGAA  900

seq1  GTACTAGAAGTGGAAAGCTGTAGGGCTGTAACTGGACACCTACCTGGTCA  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||| 
seq2  GTACTAGAAGTGGAAAGCTGTAGGGCTGT-ACTGGACACCTACCTGGTC-  948

seq1  AGGACAGCTCAGAGCACAGGAAGTCTGTGGGTCACATAGTGTCTACCATG  999
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGGACAGCTCAGAGCACAGG-AGTCTGTGGGTCACATAGTGTCTACCATG  997

seq1  CAGAATGACGCCCCTGATCCCATGGTCCAAGGACCTGGGACAAGTGCACA  1049
      ||| |||||||||||||||||||| ||  |||||   |||| ||||||||
seq2  CAG-ATGACGCCCCTGATCCCATGATC--AGGAC--TGGAC-AGTGCACA  1041

seq1  GGGATCCACCTGCACCCCCTGGCATTACATGCCAAGCCGTTACCCAAAGC  1099
       ||||||||||||| |||||| |||   ||||  || || ||||||| ||
seq2  -GGATCCACCTGCA-CCCCTGCCAT--AATGC--AGGCGGTACCCAAGGC  1085

seq1  TAGGTGAGATGCAGGTTATCT  1120
      ||||||||||||| |||||||
seq2  TAGGTGAGATGCAAGTTATCT  1106