MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-088I11
Chromosome	12 (Build37)
Map Location	92,123,300 - 92,123,825
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Nrxn3, LOC100039498, LOC100039287, Dio2, LOC100039295
Downstream gene	4930544I03Rik, 4930534B04Rik, 5430427M07Rik, Tshr, Gtf2a1, Ston2, EG666955, LOC100039631, Sel1l, LOC100039367
Link	Open Mouse BAC browser

Click to get alignment info.

name	Nrxn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18191 MGI:1096389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039498 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039498
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100039287 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Dio2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13371 MGI:1338833
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039295 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039295
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	4930544I03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78197 MGI:1925447
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	4930534B04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75216 MGI:1922466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5430427M07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71349 MGI:1918599
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Tshr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22095 MGI:98849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtf2a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83602 MGI:1933277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ston2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108800 MGI:1918272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666955 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666955 MGI:3646777
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	LOC100039631 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039631
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Sel1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20338 MGI:1329016
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100039367 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039367
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Nrxn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353846 GeneID:18191 MGI:1096389
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neurexin III transcript_id : NM_172544.2

name	LOC100039498 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263460 GeneID:100039498
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100039498 transcript_id : XM_001473064.1

name	Dio2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:132566530 GeneID:13371 MGI:1338833
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : deiodinase, iodothyronine, type II transcript_id : NM_010050.2

name	4930544I03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263462 GeneID:78197 MGI:1925447
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930544I03 gene transcript_id : XM_488646.5

name	4930534B04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:64085215 GeneID:75216 MGI:1922466
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930534B04 gene transcript_id : NM_181815.2

name	5430427M07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263464 GeneID:71349 MGI:1918599
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 5430427M07 gene transcript_id : XM_001473168.1

name	Tshr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892366 GeneID:22095 MGI:98849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thyroid stimulating hormone receptor transcript_id : NM_011648.4

name	Gtf2a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365797 GeneID:83602 MGI:1933277
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II A, 1 transcript_id : NM_175335.2

name	Gtf2a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13878224 GeneID:83602 MGI:1933277
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II A, 1 transcript_id : NM_031391.1

name	Ston2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376694 GeneID:108800 MGI:1918272
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stonin 2 transcript_id : NM_175367.3

name	EG666955 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263468 GeneID:666955 MGI:3646777
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : predicted gene, EG666955 transcript_id : XM_001000153.2

name	LOC100039631 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263469 GeneID:100039631
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100039631 transcript_id : XM_001473324.1

name	Sel1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84875518 GeneID:20338 MGI:1329016
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sel-1 suppressor of lin-12-like (C. elegans) transcript_id : NM_011344.2

name	Sel1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84875512 GeneID:20338 MGI:1329016
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sel-1 suppressor of lin-12-like (C. elegans) transcript_id : NM_001039089.1

name	Nrxn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27881433 GeneID:18191 MGI:1096389
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0042734 - presynaptic membrane [Evidence ISS] GO_function : GO:0005246 - calcium channel regulator activity [Evidence IGI]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007269 - neurotransmitter secretion [Evidence IGI]; GO:0007268 - synaptic transmission [Evidence IGI]; GO:0007416 - synaptogenesis [Evidence IGI] codon_start : 1 exception : mismatches in translation note : neurexin III beta; neurexin III alpha product : neurexin III protein_id : NP_766132.1

name	LOC100039498 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263461 GeneID:100039498
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473114.1

name	Dio2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753638 GeneID:13371 MGI:1338833
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008430 - selenium binding [Evidence IEA]; GO:0004800 - thyroxine 5'-deiodinase activity [Evidence IMP] GO_process : GO:0042446 - hormone biosynthesis [Evidence IEA]; GO:0042404 - thyroid hormone catabolism [Evidence IMP] codon_start : 1 note : iodothyronine type II deiodinase; type-II 5' deiodinase product : deiodinase, iodothyronine, type II protein_id : NP_034180.1 transl_except : (pos:complement(91968263..91968265),aa:Sec) transl_except : (pos:complement(91967864..91967866),aa:Sec)

name	4930544I03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263463 GeneID:78197 MGI:1925447
definition	codon_start : 1 product : hypothetical protein LOC78197 protein_id : XP_488646.3

name	4930534B04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:64085216 GeneID:75216 MGI:1922466
definition	codon_start : 1 product : hypothetical protein LOC75216 protein_id : NP_861536.2

name	5430427M07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263465 GeneID:71349 MGI:1918599
definition	codon_start : 1 product : hypothetical protein LOC71349 protein_id : XP_001473218.1

name	Tshr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62990176 CCDS:CCDS26088.1 GeneID:22095 MGI:98849
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0004996 - thyroid-stimulating hormone receptor activity [Evidence IDA] GO_process : GO:0008344 - adult locomotory behavior [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007189 - G-protein signaling, adenylate cyclase activating pathway [Evidence IDA]; GO:0040018 - positive regulation of body size [Evidence IMP]; GO:0040012 - regulation of locomotion [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : thyroid stimulating hormone receptor protein_id : NP_035778.3

name	Gtf2a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13878225 CCDS:CCDS26089.1 GeneID:83602 MGI:1933277
definition	GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1; TFIIA alpha/beta; general transcription factor IIa, 1 (37kD and 19kD subunits) product : general transcription factor II A, 1 isoform 1 protein_id : NP_113568.1

name	Gtf2a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30141908 GeneID:83602 MGI:1933277
definition	GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; TFIIA alpha/beta; general transcription factor IIa, 1 (37kD and 19kD subunits) product : general transcription factor II A, 1 isoform 2 protein_id : NP_780544.1

name	Ston2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425068 CCDS:CCDS26090.1 GeneID:108800 MGI:1918272
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006897 - endocytosis [Evidence IEA]; GO:0030100 - regulation of endocytosis [Evidence IDA] codon_start : 1 product : stonin 2 protein_id : NP_780576.1

name	EG666955 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94393002 GeneID:666955 MGI:3646777
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001000153.1

name	LOC100039631 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263470 GeneID:100039631
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473374.1

name	Sel1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46309573 GeneID:20338 MGI:1329016
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0007219 - Notch signaling pathway [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; Sel1 (suppressor of lin-12) 1 homolog product : Sel1 (suppressor of lin-12) 1 homolog isoform b protein_id : NP_035474.1

name	Sel1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84875513 CCDS:CCDS26091.1 GeneID:20338 MGI:1329016
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0007219 - Notch signaling pathway [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; Sel1 (suppressor of lin-12) 1 homolog product : Sel1 (suppressor of lin-12) 1 homolog isoform a protein_id : NP_001034178.1

name	LOC100039287 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039287
definition	number : 1 pseudo : _no_value

name	LOC100039295 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039295
definition	number : 1 pseudo : _no_value

name	LOC100039295 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039295
definition	number : 2 pseudo : _no_value

name	LOC100039295 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039295
definition	number : 3 pseudo : _no_value

name	LOC100039295 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039295
definition	number : 4 pseudo : _no_value

name	LOC100039367 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039367
definition	number : 7 pseudo : _no_value

name	LOC100039367 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039367
definition	number : 6 pseudo : _no_value

name	LOC100039367 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039367
definition	number : 5 pseudo : _no_value

name	LOC100039367 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039367
definition	number : 4 pseudo : _no_value

name	LOC100039367 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039367
definition	number : 3 pseudo : _no_value

name	LOC100039367 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039367
definition	number : 2 pseudo : _no_value

name	LOC100039367 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039367
definition	number : 1 pseudo : _no_value

clone name	MSMg01-081P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344A13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-301F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185M01
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-088I11.b	B6Ng01-088I11.g
ACC	DH901355	DH901356
length	520	1,071
definition	DH901355\|Mus musculus domesticus DNA, BAC clone: B6Ng01-088I11, 5' end.	DH901356\|Mus musculus domesticus DNA, BAC clone: B6Ng01-088I11, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	tgtgctcctggaagaaagcgtgcatttccccttgctgtttctgggccctt tctaccctttcttttttttctctacctttcccccttccttcatcttcctt ttcaaattttcttttcttttggtctctgtactctttatttatttataact ctcgtatgtacaaaacaaagcacattcctgtccacgttcctttctatgta gcgtttccctcagtatgacaggtcatgtttcatttgaattgtggaaagtg ctgtgtgccacgtggtaggttcgctatcaccacagattagctgggaacca gtagaaatctataaagaaaatggtgacgaacctatcttctgtcttacaca tttctttgatttttctctgaaagggtctttctctactccattcttcccta ttttttcatcccattgctgttccagtattagctcacctttgctgtgtaac atactaccactcagatagtggcttaaacacgtgtttctatctcatagttg tgtgtgtggggggggtgggg	gaattctctatttagacttgtaccctattttagttgggttatttgttttc ttgatgttcagtttttttttttttgagttctctatttgttttagatatta gccctctatttgatgtgtagttattaagaaaacaaacttttccctattat gttgtctgccactttttctaaatgatggtgacctttgccatagagaagct tcaagacatcccagttattaattgttgttctcagtgcctgtgctaatggt gttctgttcagaaagtttttccttgtgccaatgagttcaagactattccc tactttattgtctatcatggttactgtatctggtcttgttttgaaatctt tcatccacttggagttgagttttatgcaaggtgacgaaataacagctctt ctggcaaaaacaaggagtagggggagattcattcattgttggtgtgttta aatttgtacagtcactatggaaatcagtatggtgattccttagggagaat cactatggaaatcagtatggtgattccttagggagctgtgaatagatcta cccaagatccagctatactactcttgagcatatacccaaaggactctaca gcctactagaagcatactttctcaaatatgtttatttctgctttattcat aataaccaaaaaatggaaccagagtatatttctgtcaattgaatggataa ctgtggtacatttatacaatgaaataacactccgctgctaagaaatgaaa tttgcaggtaaatcggtataactagataaaatcatcctgatttcattctg gagtaacacaaacaccaaaaggcaaatataatattatttacttatatatt aatgttagctgttattctttaataaccagctataatccatgtaactgcag aggttaagataagtaatggactagggagaaggattgggtcaccctagaag aaaaataaaatggataattatgggtggatgggaagaagactaggaagata tcaattaaagagggggagggagctgaaaacctcgatagatctttaatatg atcttctgagatgcctgtgaa
quality values	Open. Hide. 47 43 47 49 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 12 14 20 19 12 23 30 30 28 28 28 30 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 43 43 36 28 28 30 43 41 44 44 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 55 55 61 61 47 50 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 53 61 61 61 53 53 61 61 61 61 61 61 61 61 61 53 61 52 61 61 61 61 61 53 61 61 61 61 61 53 53 53 53 53 53 57 57 57 53 53 57 57 57 53 57 57 57 47 47 57 47 47 53 57 47 27 12	Open. Hide. 61 61 55 59 61 61 19 19 13 11 12 13 21 8 10 19 12 28 30 55 52 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 33 23 27 26 23 30 26 31 26 59 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 59 59 59 59 59 61 61 61 59 59 61 61 61 59 52 61 59 59 61 61 61 59 61 61 59 59 59 44 49 59 59 61 59 59 59 59 59 59 59 59 52 59 61 59 55 59 59 59 44 59 59 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 59 55 55 59 59 55 55 59 61 59 59 59 59 59 59 59 59 59 59 59 55 59 55 59 61 61 59 59 59 52 59 59 39 59 45 59 59 45 59 61 59 59 52 59 52 61 59 52 59 59 59 59 59 52 59 59 59 61 59 59 61 61 59 61 59 55 55 59 59 59 59 59 59 52 59 61 59 61 59 61 59 59 59 61 61 61 61 61 61 59 61 59 59 61 61 61 59 59 59 52 33 59 59 59 59 59 61 61 59 59 59 59 59 59 59 59 59 59 59 59 59 61 61 61 59 59 59 59 52 59 45 59 44 59 52 59 59 59 61 61 61 61 59 61 61 61 59 61 61 61 59 59 59 59 59 59 59 59 61 61 61 59 59 61 59 61 59 59 61 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 52 52 52 43 49 52 59 44 59 59 59 59 59 59 61 59 59 59 59 59 59 59 61 59 59 59 59 59 59 59 59 59 52 52 59 61 59 59 61 59 36 61 59 59 59 59 59 59 59 59 36 41 52 52 52 59 59 59 61 59 59 59 59 59 59 59 52 59 59 61 61 59 59 59 52 61 61 61 61 61 59 61 59 59 59 49 59 59 59 43 59 59 61 59 59 61 61 61 61 61 61 55 61 55 55 61 61 61 61 61 61 61 61 61 55 52 52 55 49 55 52 52 55 55 55 55 52 52 52 34 34 31 52 61 61 61 61 55 61 61 55 55 55 55 50 50 61 55 55 55 61 61 55 61 61 61 55 61 55 61 61 61 61 61 61 55 55 55 55 37 50 55 55 61 61 50 61 47 43 50 50 50 49 55 61 55 61 61 61 61 61 61 61 61 61 61 55 52 61 50 61 61 50 53 47 61 50 53 43 61 50 53 50 43 47 35 35 50 50 50 53 45 50 50 50 50 52 43 50 53 53 53 38 52 47 50 50 61 52 53 53 47 23 50 50 50 61 61 50 61 42 42 32 35 29 23 50 50 52 50 50 47 43 39 61 47 28 50 35 47 33 27 42 47 53 53 50 37 15 42 53 52 45 61 52 45 61 33 42 47 61 61 45 61 43 42 31 57 53 45 53 53 53 23 43 47 53 45 53 28 47 30 9 47 47 57 57 53 32 57 50 39 32 29 46 34 38 53 25 43 34 38 27 42 32 45 45 53 47 42 17 8 8 11 16 14 42 52 43 46 53 37 31 30 57 45 53 42 29 53 52 30 34 42 34 36 53 35 38 45 38 50 24 52 30 45 42 57 57 38 30 50 50 32 30 45 36 32 13 38 53 45 50 42 23 47 23 47 33 16 21 36 38 46 45 24 45 43 32 27 33 30 53 31 52 57 18 28 24 39 14 14 22 22 30 23 31 33 47 30 52 32 23 57 57 39 28 27 21 31 27 41 24 38 33 13 20 18 15 17 20 47 30 25 42 52 40 16 33 33 17 25 20 26 14 50 37 25 8 15 26 20 24 38 24 25 38 12 40 57 37 38 36 32 26 10 25 31 19 30 24 34 15 19 24 20 14 20 24 27 18 27 18 21 37 27 29 19 41 24 36 40 36 31 29 40 7 9 21 9 20 19 33 57 41 31 36 23 15 13 39 23 44 10 16 27 24 30 8 22 20 20 30 12 26 37 17 18 23 25 15 18 21 7 5 22 12 20 15 30 32 37 12 57 27 53 57 18 27 24 29 20 21 27 15 15 20 24 23 30 24 21 14 19 30 12 22 18 16 48 29 17 13 18 22 20 19 27 30 17 30 11 30 27 14 29 19 7 27 20 14 13 10 13 18 5 29 13 21 8 9 29 15 28 13 23 13 30 22 7 11 13 12 14 29 33 13 26 29 23 7 24 4 25 15 8 18 8 7 8 7 9 16 21 11 10 6 7 6 9 8 8 7 9 11 12 13 24 33 29 20 8 6 32 11 20 7 7 12 12 11 12 12 10 6 6 21 5 7 8 7 6 13 10 11 9 10 7 7 11 30 15 7 12 7 7 8 5 17 10 11 19 10 9 5 12 10 9 7 6 14 6 23 8 6 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_92123300_92123825
seq2: B6Ng01-088I11.b_46_571 (reverse)

seq1  CCCCACCCCCCCCACACACACAACTATGAGATAGAAACACGTGTTTAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCCCCCACACACACAACTATGAGATAGAAACACGTGTTTAAGC  50

seq1  CACTATCTGAGTGGTAGTATGTTACACAGCAAAGGTGAGCTAATACTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATCTGAGTGGTAGTATGTTACACAGCAAAGGTGAGCTAATACTGGA  100

seq1  ACAGCAATGGGATGAAAAAATAGGGAAGAATGGAGTAGAGAAAGACCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAATGGGATGAAAAAATAGGGAAGAATGGAGTAGAGAAAGACCCTT  150

seq1  TCAGAGAAAAATCAAAGAAATGTGTAAGACAGAAGATAGGTTCGTCACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAAAAATCAAAGAAATGTGTAAGACAGAAGATAGGTTCGTCACCA  200

seq1  TTTTCTTTATAGATTTCTACTGGTTCCCAGCTAATCTGTGGTGATAGCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTATAGATTTCTACTGGTTCCCAGCTAATCTGTGGTGATAGCGA  250

seq1  ACCTACCACGTGGCACACAGCACTTTCCACAATTCAAATGAAACATGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACCACGTGGCACACAGCACTTTCCACAATTCAAATGAAACATGACC  300

seq1  TGTCATACTGAGGGAAACGCTACATAGAAAGGAACGTGGACAGGAATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATACTGAGGGAAACGCTACATAGAAAGGAACGTGGACAGGAATGTG  350

seq1  CTTTGTTTTGTACATACGAGAGTTATAAATAAATAAAGAGTACAGAGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTTGTACATACGAGAGTTATAAATAAATAAAGAGTACAGAGACC  400

seq1  AAAAGAAAAGAAAATTTGAAAAGGAAGATGAAGGAAGGGGGAAAGGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAGAAAATTTGAAAAGGAAGATGAAGGAAGGGGGAAAGGTAGA  450

seq1  GAAAAAAAAGAAAGGGTAGAAAGGGCCCAGAAACAGCAAGGGGAAATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAGAAAGGGTAGAAAGGGCCCAGAAACAGCAAGGGGAAATGCA  500

seq1  CGCTTTCTTCCAGGAGCACAGAATTC  526
      ||||||||||||||||||||||||||
seq2  CGCTTTCTTCCAGGAGCACAGAATTC  526

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information