BAC Information

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BAC

Clone NameB6Ng01-091B04
Chromosome12 (Build37)
Map Location 9,594,225 - 9,752,885
singlet/doubletdoublet
Overlap genenone
Upstream geneSlc7a15, Pum2, F730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32, LOC633030, LOC100042238, Osr1
Downstream geneLOC382567, Nt5c1b, Rdh14, LOC238074
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091B04.bB6Ng01-091B04.g
ACCDH903205DH903206
length1,134406
definitionDH903205|Mus musculus domesticus DNA, BAC clone: B6Ng01-091B04, 5' end.DH903206|Mus musculus domesticus DNA, BAC clone: B6Ng01-091B04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,594,225 - 9,595,364)(9,752,474 - 9,752,885)
sequence
gaattccagagaatacgatccttaaataaggaaatttacttgggtgcttg
tttctcatcctggtaacctgaatagagaaccaaatggatctataagatac
atatgttttaaagataaatgtaagaatatgtgcttgcatatatgtatgtg
ccccaaatgcacgctaatattcatgtaggcaaagagaggccatttaatcc
cctggaactggagttacagggggtataagctgccgttgcttggaactgaa
cccaggtcctctgcaagagcagtgagtgcccttaactgctgagccatttc
tttaaccaatatttatatttttagttaggtccctttctttcatacagtac
ataatttttgaattttcctttattcctttatactttaaccaccaccacac
acacacacacacacacacacacacacacacacaccaccgagtcaccatgg
gaaagctacttgaatgcccctttcttgaattcttaaaaatcttgtacttc
agcatctggagtgcccactttcagtgccttaagtgaattcatgatgtcat
ttgcctgtggaatgccataatgagtcctttaatgtttgacaaggttccaa
ttgatgttccctgagacatgtttgctcctgctttcttcaccagtccttgt
ccaggggtgctcagaaaagggccataagcactttgtcatttagatgactg
ttacagaaaggggcttgtccatcagggtagctcaggtttgcctccccttt
gacagtagtactcatggggactcttcggtgtggtggctgggacaatgaca
tgttttcctgtgggaaaaccatgaagcagtggtagggtgactgtctaagg
ggtcatgcaagtttctaacctgtagaaatgggtaattttaattttttatt
gtcgtactaggcatttaactgtgatagctggaactgaagggctgggagag
gcaccgtagcgacatattttttccagcatcgttcaccctgtaatttaatt
taaggcatttctaaacacagagaaatgaatttcatagtggaatacccgat
tacccaccactaggcttacaatcaatttttctatacttggattataacca
catctaccaatctaccccttcaaccataaggtaa

tttccagaaatcaaacctgtgcagaaaatatccttggaatttagggccat
gtgatatgctttcatctatggaaagaaccaaagtttctgtagagatattc
tattgtatatcctgagtggctttgctatatctccccgtaacaagaggagc
tcagcacaggaaatgctctttgccttctacaagatcatcacacataactg
gcatggccacccaactcttattattccctcttcacaaatgtggaaagtaa
gacttttgaaagtaagcatttataggtgacagagttgggaatgaaatgca
agtcttactctgtagcttcaaaatctcacactggccttagagggagagga
tgcacctagcactgaagtaacttgaggtaccaggctgggttggtatgggg
gggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_9594225_9595364
seq2: B6Ng01-091B04.b_48_1181

seq1  GAATTCCAGAGAATACGATCCTTAAATAAGGAAATTTACTTGGGTGCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGAATACGATCCTTAAATAAGGAAATTTACTTGGGTGCTTG  50

seq1  TTTCTCATCCTGGTAACCTGAATAGAGAACCAAATGGATCTATAAGATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATCCTGGTAACCTGAATAGAGAACCAAATGGATCTATAAGATAC  100

seq1  ATATGTTTTAAAGATAAATGTAAGAATATGTGCTTGCATATATGTATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTTTAAAGATAAATGTAAGAATATGTGCTTGCATATATGTATGTG  150

seq1  CCCCAAATGCACGCTAATATTCATGTAGGCAAAGAGAGGCCATTTAATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAATGCACGCTAATATTCATGTAGGCAAAGAGAGGCCATTTAATCC  200

seq1  CCTGGAACTGGAGTTACAGGGGGTATAAGCTGCCGTTGCTTGGAACTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAACTGGAGTTACAGGGGGTATAAGCTGCCGTTGCTTGGAACTGAA  250

seq1  CCCAGGTCCTCTGCAAGAGCAGTGAGTGCCCTTAACTGCTGAGCCATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTCCTCTGCAAGAGCAGTGAGTGCCCTTAACTGCTGAGCCATTTC  300

seq1  TTTAACCAATATTTATATTTTTAGTTAGGTCCCTTTCTTTCATACAGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCAATATTTATATTTTTAGTTAGGTCCCTTTCTTTCATACAGTAC  350

seq1  ATAATTTTTGAATTTTCCTTTATTCCTTTATACTTTAACCACCACCACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTTGAATTTTCCTTTATTCCTTTATACTTTAACCACCACCACAC  400

seq1  ACACACACACACACACACACACACACACACACACCACCGAGTCACCATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACCACCGAGTCACCATGG  450

seq1  GAAAGCTACTTGAATGCCCCTTTCTTGAATTCTTAAAAATCTTGTACTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTACTTGAATGCCCCTTTCTTGAATTCTTAAAAATCTTGTACTTC  500

seq1  AGCATCTGGAGTGCCCACTTTCAGTGCCTTAAGTGAATTCATGATGTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTGGAGTGCCCACTTTCAGTGCCTTAAGTGAATTCATGATGTCAT  550

seq1  TTGCCTGTGGAATGCCATAATGAGTCCTTTAATGTTTGACAAGGTTCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGTGGAATGCCATAATGAGTCCTTTAATGTTTGACAAGGTTCCAA  600

seq1  TTGATGTTCCCTGAGACATGTTTGCTCCTGCTTTCTTCACCAGTCCTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTTCCCTGAGACATGTTTGCTCCTGCTTTCTTCACCAGTCCTTGT  650

seq1  CCAGGGGTGCTCAGAAAAGGGCCATAAGCACTTTGTCATTTAGATGACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGTGCTCAGAAAAGGGCCATAAGCACTTTGTCATTTAGATGACTG  700

seq1  TTACAGAAAGGGGCTTGTCCATCAGGGTAGCTCAGGTTTGCCTCCCCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAAAGGGGCTTGTCCATCAGGGTAGCTCAGGTTTGCCTCCCCTTT  750

seq1  GACAGTAGTACTCATGGGGACTCTTCGGTGTGGTGGCTGGGACAATGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTAGTACTCATGGGGACTCTTCGGTGTGGTGGCTGGGACAATGACA  800

seq1  TGTTTTCCTGTGGGAAAACCATGAAGCAGTGGTAGGGTGACTGTCTAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCCTGTGGGAAAACCATGAAGCAGTGGTAGGGTGACTGTCTAAGG  850

seq1  GGTCATGCAAGTTTCTAACCTGTAGAAATGGGTAATTTTAATTTTTTATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGCAAGTTTCTAACCTGTAGAAATGGGTAATTTTAATTTTTTATT  900

seq1  GTCGTAACTAGGCATTTAACTGTGATAGCTGGAACTGAAGGGCTGGGAGA  950
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGT-ACTAGGCATTTAACTGTGATAGCTGGAACTGAAGGGCTGGGAGA  949

seq1  GGCACCGTAGCGACATATTTTTTCCAGCATCGTTCACCCTGTAATTTAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCGTAGCGACATATTTTTTCCAGCATCGTTCACCCTGTAATTTAAT  999

seq1  TTAA-GCATTTCTAAACACAGAGAAATTGAATTTCATAGT-GAATACCCA  1048
      |||| ||||||||||||||||||||| ||||||||||||| |||||||| 
seq2  TTAAGGCATTTCTAAACACAGAGAAA-TGAATTTCATAGTGGAATACCCG  1048

seq1  ATTACCCACCACTTAGGCTTTACAATCAACATTTTCCTATACTTGATTTA  1098
      |||||||||||| ||||| |||||||||  ||||| |||||||||  |||
seq2  ATTACCCACCAC-TAGGC-TTACAATCA--ATTTTTCTATACTTGGATTA  1094

seq1  TTACACACATCTACCAATCTACCCTTCAAACCATTAAGGTAA  1140
      | || ||||||||||||||||||| |  ||||| ||||||||
seq2  TAAC-CACATCTACCAATCTACCCCTTCAACCA-TAAGGTAA  1134


seq1: chr12_9752474_9752885
seq2: B6Ng01-091B04.g_68_479 (reverse)

seq1  CCCCCCCCCCATACCAACCCAGCCTGGTACCTCAAGTTACTTCAGTGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCATACCAACCCAGCCTGGTACCTCAAGTTACTTCAGTGCTA  50

seq1  GGTGCATCCTCTCCCTCTAAGGCCAGTGTGAGATTTTGAAGCTACAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCATCCTCTCCCTCTAAGGCCAGTGTGAGATTTTGAAGCTACAGAGT  100

seq1  AAGACTTGCATTTCATTCCCAACTCTGTCACCTATAAATGCTTACTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTGCATTTCATTCCCAACTCTGTCACCTATAAATGCTTACTTTCA  150

seq1  AAAGTCTTACTTTCCACATTTGTGAAGAGGGAATAATAAGAGTTGGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTTACTTTCCACATTTGTGAAGAGGGAATAATAAGAGTTGGGTGG  200

seq1  CCATGCCAGTTATGTGTGATGATCTTGTAGAAGGCAAAGAGCATTTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCAGTTATGTGTGATGATCTTGTAGAAGGCAAAGAGCATTTCCTG  250

seq1  TGCTGAGCTCCTCTTGTTACGGGGAGATATAGCAAAGCCACTCAGGATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGCTCCTCTTGTTACGGGGAGATATAGCAAAGCCACTCAGGATAT  300

seq1  ACAATAGAATATCTCTACAGAAACTTTGGTTCTTTCCATAGATGAAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAGAATATCTCTACAGAAACTTTGGTTCTTTCCATAGATGAAAGCA  350

seq1  TATCACATGGCCCTAAATTCCAAGGATATTTTCTGCACAGGTTTGATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACATGGCCCTAAATTCCAAGGATATTTTCTGCACAGGTTTGATTTC  400

seq1  TGGAAAGAATTC  412
      ||||||||||||
seq2  TGGAAAGAATTC  412


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