BAC Information

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BAC

Clone NameB6Ng01-091K18
Chromosome12 (Build37)
Map Location 113,309,433 - 113,453,041
singlet/doubletdoublet
Overlap geneA530050D06Rik, Kif26a
Upstream geneRcor1, 4930595D18Rik, Traf3, Amn, Cdc42bpb, A230065H16Rik, 1200009I06Rik, Tnfaip2, Gm266, Eif5, Mark3, Ckb, 6720458F09Rik, Bag5, 2810002N01Rik, Klc1, Xrcc3, Zfyve21, Ppp1r13b, LOC100041886, 2010107E04Rik, BC048943, Tdrd9
Downstream geneA730018C14Rik, A530016L24Rik, Tmem179, 2610204M08Rik, Adssl1, Siva1, Akt1, EG382639, AW555464, LOC382640, Pld4, AI450948, LOC100041194, BC022687, Cdca4, Gpr132, Jag2, Nudt14, Brf1, Btbd6, Pacs2, Tex22, Mta1, Crip2, Crip1, 4930427A07Rik, LOC676349, Tmem121
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091K18.bB6Ng01-091K18.g
ACCDH903634DH903635
length9841,175
definitionDH903634|Mus musculus domesticus DNA, BAC clone: B6Ng01-091K18, 5' end.DH903635|Mus musculus domesticus DNA, BAC clone: B6Ng01-091K18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,309,433 - 113,310,191)(113,451,845 - 113,453,041)
sequence
gaattcagaaggacgtttattaaaacgtatttcaaagatgataaaataag
tgggttagaagtgcagggtatgagagagcaattaaagagtctgggaacag
agaccaatgcttggacagtgtgggcaaaagagcagacgccaagccttgaa
gacagtgctggtgagacttcacacttcaattctgataggaatggacagca
tgcatgacccttgagacagcactgaaagactaagcacatagaccaggagg
ggccaggagccacaggcttacaggcataggaaatctatttggcaaaataa
gaggaattttcttaaacattggggaaatgtgggcatacaggtaatggggc
atttagaacctcaaatagacatggtaagaaaagaacttatatatcatagt
taagctttcaaaacataaggagtatttaaaaatacaagagaaatcttgag
ctgtgtataaaggcaaactgtcttagtcagggtttctattcctgcgcaaa
catcatgaccaagaagcaagatggggaggaaagggtttattcggcttaca
cttccacattgctgttcatcaccaaggaagtcaggactggaacacaagca
ggtcaggaagcaggagctgatgcagaggccatggagggatgttccttact
ggcttgcttcccctggcttgctcagcctgctctcatagaaccaagactac
cagcccagagatggccccacccacaaggggcctatccccccttgatcact
aattgagaaaatgccttacagctggatctcatggaggcatttcctcaact
gaagctcctttctctgtgataactccagctatgtcaagttgacacaaaac
tagccagtacacaaacccagcagaataacagcaggtttctcagcagaaac
tgaagggaccaggaaagcatgaacgatatatttaagtccccaaattactg
ccaaaataggcagctgtacccagtaggctatctt
gaattcacattattgctaccatccaccctgttagactcataattggacat
ggagctgccgccggggcaggcagagaggagggcagcgtttgatcctggag
gggcgggtagctgcctggggagtgtgcgctcatctgtaattggcgtctcc
tcccttgcactcggcctgcctggctacctttcatctagaggacaggcggg
gctgcaggctctcatctctcctcccaggcctggcagccatgagtagtaac
tcagctgtccccccaccccgccctcctgtctcaccccatagtgtggagcc
ttcgtctgaccctgagcagagcaggcagcctcctttctaatttactggcc
ggccctcgatcagctcctcccacaggcttggacccatttgttcccgtcac
aggagttaccttgaagcccagaacaacactgggtatgcctaacaaccaaa
tgagtaaccaccattgaataaagacccagaactacagcaaaccagggcag
tgctagcttggcctaggctatccccaaaccactgtgaatcaaggtcaggg
cctggtgactgaggacagggtcagcctctagccacctgactagtcttttg
tggctctgagatagtgtctcagctcagcccagtgtctactctgttgcccc
cagaccctgacccttgccccatgtgttggggccccatgtgaccccaagat
ccggggcattgagccagatgtctgcccccagctcctatccaagtcataag
ggaaaaatgaggacccctcctccagattagaacctacctcagcaggagct
cgaataggggagtgacccccagacaacaaagtcccaggcagcctgcctgc
caaactcatggctgctgaatgtggccatatcaaacccaaaccgtctcaag
tcaagaaacaaagattccaggtaaaagaggcagagcaactcatgacatct
gttcctctgcctctgcctctgctctggcatagagcctcatcgacgctgtg
gccttgctggacagccactgtgagccctgtcccttctatccctaaaatgg
accacgacgacagaaacagaagagttagcttcggaagcattcccgagctg
ggaggatgctgcttctgtccatgcaggcctggttagagacctcagcccct
gttcataaggcttctgcctaacgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_113309433_113310191
seq2: B6Ng01-091K18.b_49_807

seq1  GAATTCAGAAGGACGTTTATTAAAACGTATTTCAAAGATGATAAAATAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAGGACGTTTATTAAAACGTATTTCAAAGATGATAAAATAAG  50

seq1  TGGGTTAGAAGTGCAGGGTATGAGAGAGCAATTAAAGAGTCTGGGAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTAGAAGTGCAGGGTATGAGAGAGCAATTAAAGAGTCTGGGAACAG  100

seq1  AGACCAATGCTTGGACAGTGTGGGCAAAAGAGCAGACGCCAAGCCTTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAATGCTTGGACAGTGTGGGCAAAAGAGCAGACGCCAAGCCTTGAA  150

seq1  GACAGTGCTGGTGAGACTTCACACTTCAATTCTGATAGGAATGGACAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTGCTGGTGAGACTTCACACTTCAATTCTGATAGGAATGGACAGCA  200

seq1  TGCATGACCCTTGAGACAGCACTGAAAGACTAAGCACATAGACCAGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGACCCTTGAGACAGCACTGAAAGACTAAGCACATAGACCAGGAGG  250

seq1  GGCCAGGAGCCACAGGCTTACAGGCATAGGAAATCTATTTGGCAAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGAGCCACAGGCTTACAGGCATAGGAAATCTATTTGGCAAAATAA  300

seq1  GAGGAATTTTCTTAAACATTGGGGAAATGTGGGCATACAGGTAATGGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATTTTCTTAAACATTGGGGAAATGTGGGCATACAGGTAATGGGGC  350

seq1  ATTTAGAACCTCAAATAGACATGGTAAGAAAAGAACTTATATATCATAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAACCTCAAATAGACATGGTAAGAAAAGAACTTATATATCATAGT  400

seq1  TAAGCTTTCAAAACATAAGGAGTATTTAAAAATACAAGAGAAATCTTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTTCAAAACATAAGGAGTATTTAAAAATACAAGAGAAATCTTGAG  450

seq1  CTGTGTATAAAGGCAAACTGTCTTAGTCAGGGTTTCTATTCCTGCGCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTATAAAGGCAAACTGTCTTAGTCAGGGTTTCTATTCCTGCGCAAA  500

seq1  CATCATGACCAAGAAGCAAGATGGGGAGGAAAGGGTTTATTCGGCTTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGACCAAGAAGCAAGATGGGGAGGAAAGGGTTTATTCGGCTTACA  550

seq1  CTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACACAAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACACAAGCA  600

seq1  GGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCCTTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCCTTACT  650

seq1  GGCTTGCTTCCCCTGGCTTGCTCAGCCTGCTCTCATAGAACCAAGACTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCTTCCCCTGGCTTGCTCAGCCTGCTCTCATAGAACCAAGACTAC  700

seq1  CAGCCCAGAGATGGCCCCACCCACAAGGGGCCTATCCCCCCTTGATCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCAGAGATGGCCCCACCCACAAGGGGCCTATCCCCCCTTGATCACT  750

seq1  AATTGAGAA  759
      |||||||||
seq2  AATTGAGAA  759

seq1: chr12_113451845_113453041
seq2: B6Ng01-091K18.g_69_1243 (reverse)

seq1  GGCGTTCTGAGGGCAGGAAGCCTTTTTATGGACAGGGGCTGCAGTCTCTA  50
      ||||||     |||| ||||||   ||||| ||||||||||  |||||||
seq2  GGCGTT----AGGCA-GAAGCC---TTATGAACAGGGGCTGAGGTCTCTA  42

seq1  ACACGGGCTTGCCATGGACAGAGCCGGCATCCTCCCAAGCTCGGGCACTG  100
      || | ||| || ||||||||||  | |||||||||| |||||||| | ||
seq2  AC-CAGGCCTG-CATGGACAGAAGCAGCATCCTCCC-AGCTCGGG-AATG  88

seq1  CTTCCCGAGCTAACTCTTCTGTCTCTTGTTCTGTCGT-GT-GTCCATTCT  148
      |||||  |||||||||||||||      ||||||||| || ||||||| |
seq2  CTTCCGAAGCTAACTCTTCTGT------TTCTGTCGTCGTGGTCCATT-T  131

seq1  TAGGGATAGAAGTGGACAGGGCTCACAGTGGCTGTCCAGCAAGGCCACAG  198
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TAGGGATAGAAG-GGACAGGGCTCACAGTGGCTGTCCAGCAAGGCCACAG  180

seq1  CGTCGATGAGGGCTCTATGCCAGAGCAGAGGCAGAGGCAGAGGGAACAGA  248
      ||||||||| ||||||||||||||||||||||||||||||| ||||||||
seq2  CGTCGATGA-GGCTCTATGCCAGAGCAGAGGCAGAGGCAGA-GGAACAGA  228

seq1  TGTCATGAGTTGCTCTGCCTCCTTTTACCTGGAATCTTTTGTTTCTTGAC  298
      |||||||||||||||||||| ||||||||||||||| |||||||||||||
seq2  TGTCATGAGTTGCTCTGCCT-CTTTTACCTGGAATC-TTTGTTTCTTGAC  276

seq1  TTGAGACGGTTTGGGTTTTGATATGGCCACATTCAGCAGCCATGAGTTTG  348
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTGAGACGGTTTGGG-TTTGATATGGCCACATTCAGCAGCCATGAGTTTG  325

seq1  GCAGGCAGGCTGCCTGGGACTTTGTTGTCTGGGGGTCACTCCCCTATTCG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCAGGCTGCCTGGGACTTTGTTGTCTGGGGGTCACTCCCCTATTCG  375

seq1  AGCTCCTGCTGAGGTAGGTTCTAATCTGGAGGAGGGGTCCTCATTTTTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTGCTGAGGTAGGTTCTAATCTGGAGGAGGGGTCCTCATTTTTCC  425

seq1  CTTATGACTTGGATAGGAGCTGGGGGCAGACATCTGGCTCAATGCCCCGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGACTTGGATAGGAGCTGGGGGCAGACATCTGGCTCAATGCCCCGG  475

seq1  ATCTTGGGGTCACATGGGGCCCCAACACATGGGGCAAGGGTCAGGGTCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGGGTCACATGGGGCCCCAACACATGGGGCAAGGGTCAGGGTCTG  525

seq1  GGGGCAACAGAGTAGACACTGGGCTGAGCTGAGACACTATCTCAGAGCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAACAGAGTAGACACTGGGCTGAGCTGAGACACTATCTCAGAGCCA  575

seq1  CAAAAGACTAGTCAGGTGGCTAGAGGCTGACCCTGTCCTCAGTCACCAGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGACTAGTCAGGTGGCTAGAGGCTGACCCTGTCCTCAGTCACCAGG  625

seq1  CCCTGACCTTGATTCACAGTGGTTTGGGGATAGCCTAGGCCAAGCTAGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGACCTTGATTCACAGTGGTTTGGGGATAGCCTAGGCCAAGCTAGCA  675

seq1  CTGCCCTGGTTTGCTGTAGTTCTGGGTCTTTATTCAATGGTGGTTACTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTGGTTTGCTGTAGTTCTGGGTCTTTATTCAATGGTGGTTACTCA  725

seq1  TTTGGTTGTTAGGCATACCCAGTGTTGTTCTGGGCTTCAAGGTAACTCCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTGTTAGGCATACCCAGTGTTGTTCTGGGCTTCAAGGTAACTCCT  775

seq1  GTGACGGGAACAAATGGGTCCAAGCCTGTGGGAGGAGCTGATCGAGGGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACGGGAACAAATGGGTCCAAGCCTGTGGGAGGAGCTGATCGAGGGCC  825

seq1  GGCCAGTAAATTAGAAAGGAGGCTGCCTGCTCTGCTCAGGGTCAGACGAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTAAATTAGAAAGGAGGCTGCCTGCTCTGCTCAGGGTCAGACGAA  875

seq1  GGCTCCACACTATGGGGTGAGACAGGAGGGCGGGGTGGGGGGACAGCTGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCACACTATGGGGTGAGACAGGAGGGCGGGGTGGGGGGACAGCTGA  925

seq1  GTTACTACTCATGGCTGCCAGGCCTGGGAGGAGAGATGAGAGCCTGCAGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTACTCATGGCTGCCAGGCCTGGGAGGAGAGATGAGAGCCTGCAGC  975

seq1  CCCGCCTGTCCTCTAGATGAAAGGTAGCCAGGCAGGCCGAGTGCAAGGGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCCTGTCCTCTAGATGAAAGGTAGCCAGGCAGGCCGAGTGCAAGGGA  1025

seq1  GGAGACGCCAATTACAGATGAGCGCACACTCCCCAGGCAGCTACCCGCCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACGCCAATTACAGATGAGCGCACACTCCCCAGGCAGCTACCCGCCC  1075

seq1  CTCCAGGATCAAACGCTGCCCTCCTCTCTGCCTGCCCCGGCGGCAGCTCC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGATCAAACGCTGCCCTCCTCTCTGCCTGCCCCGGCGGCAGCTCC  1125

seq1  ATGTCCAATTATGAGTCTAACAGGGTGGATGGTAGC-CTAATGTGAATTC  1197
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  ATGTCCAATTATGAGTCTAACAGGGTGGATGGTAGCAATAATGTGAATTC  1175