BAC Information

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BAC

Clone NameB6Ng01-091L06
Chromosome12 (Build37)
Map Location 15,189,733 - 15,318,437
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043256, Map1lc3-ps7, LOC668492, LOC100042426
Downstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091L06.bB6Ng01-091L06.g
ACCDH903656DH903657
length1,1611,064
definitionDH903656|Mus musculus domesticus DNA, BAC clone: B6Ng01-091L06, 5' end.DH903657|Mus musculus domesticus DNA, BAC clone: B6Ng01-091L06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,189,733 - 15,190,920)(15,317,372 - 15,318,437)
sequence
gaattcatattggaaacaaccattcttacaatgagtataaaaacagtgaa
cacacaattatagttttctctcattgcaaagttcaagtgtgaaatgtaag
catcgtttgtctcagttcaaaagctacattttctcctaatcattactgct
tataggacagattggttagataattcttttatagttctagccacttcctg
aattttttgagacataatgtaatcacatctttttttcattcctccaacaa
acccttcaatgtgccctcgtgctccttttcaatccatggcctcttttaga
attcaattaattgttgtttgaaaaatatatatttgcacacatacgcatat
aatacatatttctgaattgacttaaagttttaaatgacaaccctcctttg
gcttataatatgcacttattttattgaaatgttttaaccttgattggaga
cattcaatcatataattaataaaatcagtattttgggggactatgaatac
tttcatggaatccaatagtctacaatgttgtgttctttcaagaatctcga
tatagcatactatgtattatttttgctgcttcagagagcaaaataataat
tatgtaactaattcagacagaaatacaatgcaatagaatgcaaagatgat
tagttagtgctatgacaaaaattttagtgaggatttaagtatgttacaat
cattattaaaacaaactctttggcacaggggttgacacaaataataagaa
attatacagaaaattgaaaagagtatatcaattatgagatgcccttaaag
atggaagctggagtaagagaatgaattaatcttatacacatcacttgttc
atttactgaccacaaaccaagtcctattctagtcaaaggcagtgtacaaa
tgtactgagaccagaatcattacatcatattatcatgtcttgatagatga
ggagtagatccattcacctaaagcaaagaccgatttcatatatctctctc
tttttcagtctacatgtggagtcagaccctttgagcttgtgttgtgcatt
tttttctaataataagaacagtaagtattaagcattaacacttgtaaatg
ctcattttatcaatgttataccaacaaaaacccagtgatcctccaaatgc
atttctacaga
gaattcctatcacaggactccatacttggactgtgttccaacagatgatg
tttaattaagtcctgaaaggaagactcctaaagcatacagagaggagcat
gttgtcttctgagaggctccaccgagcagctgactcagacagatacagac
atacatagccaaacagtgaatagaactgggggactattatgaaaaaaata
gaaggaaggattgctggccccaaagggaataggaactccacaaaaagacc
aaaagagtcaactaacctgaacccttggggccctcagagtctgaaccacc
aaccaaagaatatacatgggctggacctatacctcctgcacatatggagt
agatgagtagcttgctcttcatgtgggtcccaaacaactggaaagggagt
tatcccaaaagctgttgcctgtacatgggatatgttcaactagttcggct
gccttgtctggccttagtaggagcagaagcacctagcacctagcctcgca
gagatttgaagtgtcaaggtgggggcgaacatacccaggggagccctacg
ttctcagaggagaaggggaggtggaaaggattgcagcaggggcaaccaac
tgggaggggggtagtgagtaggacataaagtgaataagtgaaaaataaat
caaattaaagtacataaatacataaataaataaataaataaatgcaaaag
gcagacaacattttgaagttagatgaaattaaataaagattaaagggtga
atgtccatggttgcacgatattggtgacagaatgaaaatctttgtacaca
gtgtaataatgacaggaaatcattatgaatggtgtgctgtagtaaggaaa
agaaagaaacaaacaaaaaccaattctctagagtaaccagtaacttcaga
tgagtgaatgatatcaacccttcatacctatctcccttcatatattcatc
tttctcttatattcacatcagatcttttctttcaaacccatcaggatgaa
aattactgatgatgataattatgatgtagtggtttattatggatttttta
ccgaagagtatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_15189733_15190920
seq2: B6Ng01-091L06.b_45_1205

seq1  GAATTCATATTGGAAACAACCATTCTTACAATGAGTATAAAAACAGTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTGGAAACAACCATTCTTACAATGAGTATAAAAACAGTGAA  50

seq1  CACACAATTATAGTTTTCTCTCATTGCAAAGTTCAAGTGTGAAATGTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAATTATAGTTTTCTCTCATTGCAAAGTTCAAGTGTGAAATGTAAG  100

seq1  CATCGTTTGTCTCAGTTCAAAAGCTACATTTTCTCCTAATCATTACTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGTTTGTCTCAGTTCAAAAGCTACATTTTCTCCTAATCATTACTGCT  150

seq1  TATAGGACAGATTGGTTAGATAATTCTTTTATAGTTCTAGCCACTTCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGACAGATTGGTTAGATAATTCTTTTATAGTTCTAGCCACTTCCTG  200

seq1  AATTTTTTGAGACATAATGTAATCACATCTTTTTTTCATTCCTCCAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTGAGACATAATGTAATCACATCTTTTTTTCATTCCTCCAACAA  250

seq1  ACCCTTCAATGTGCCCTCGTGCTCCTTTTCAATCCATGGCCTCTTTTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCAATGTGCCCTCGTGCTCCTTTTCAATCCATGGCCTCTTTTAGA  300

seq1  ATTCAATTAATTGTTGTTTGAAAAATATATATTTGCACACATACGCATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATTAATTGTTGTTTGAAAAATATATATTTGCACACATACGCATAT  350

seq1  AATACATATTTCTGAATTGACTTAAAGTTTTAAATGACAACCCTCCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATATTTCTGAATTGACTTAAAGTTTTAAATGACAACCCTCCTTTG  400

seq1  GCTTATAATATGCACTTATTTTATTGAAATGTTTTAACCTTGATTGGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATAATATGCACTTATTTTATTGAAATGTTTTAACCTTGATTGGAGA  450

seq1  CATTCAATCATATAATTAATAAAATCAGTATTTTGGGGGACTATGAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAATCATATAATTAATAAAATCAGTATTTTGGGGGACTATGAATAC  500

seq1  TTTCATGGAATCCAATAGTCTACAATGTTGTGTTCTTTCAAGAATCTCGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGGAATCCAATAGTCTACAATGTTGTGTTCTTTCAAGAATCTCGA  550

seq1  TATAGCATACTATGTATTATTTTTGCTGCTTCAGAGAGCAAAATAATAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCATACTATGTATTATTTTTGCTGCTTCAGAGAGCAAAATAATAAT  600

seq1  TATGTAACTAATTCAGACAGAAATACAATGCAATAGAATGCAAAGATGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAACTAATTCAGACAGAAATACAATGCAATAGAATGCAAAGATGAT  650

seq1  TAGTTAGTGCTATGACAAAAATTTTAGTGAGGATTTAAGTATGTTACAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGTGCTATGACAAAAATTTTAGTGAGGATTTAAGTATGTTACAAT  700

seq1  CATTATTAAAACAAACTCTTTGGCACAGGGGTTGACACAAATAATAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTAAAACAAACTCTTTGGCACAGGGGTTGACACAAATAATAAGAA  750

seq1  ATTATACAGAAAATTGAAAAGAGTATATCAATTATGAGATGCCCTTAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACAGAAAATTGAAAAGAGTATATCAATTATGAGATGCCCTTAAAG  800

seq1  ATGGAAGCTGGAGTAAGAGAATGAATTAATCTTATACACATCACTTGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGCTGGAGTAAGAGAATGAATTAATCTTATACACATCACTTGTTC  850

seq1  ATTTACTGACCACAAACCAAGTCCTATTCTAGTCAAAGGCAGGTGTACAA  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATTTACTGACCACAAACCAAGTCCTATTCTAGTCAAAGGCA-GTGTACAA  899

seq1  ATGTACTGAGACCAGAATCATTACATCATATTATCATGTCTTGATAGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATGTACTGAGACCAGAATCATTACATCATATTATCATGTCTTGATAG-AT  948

seq1  GAGGAAGTAGAATCCATTCACCTAAAGCCAAAGGACCGAATTTCATTATA  1000
      |||| ||||| |||||||||||||||||  || ||||| |||||||    
seq2  GAGG-AGTAG-ATCCATTCACCTAAAGC--AAAGACCG-ATTTCAT----  989

seq1  ATTCCTCTCTCTTTTTCAGTTCTACATGT-GAGTCAGACCCTTTGAGGCT  1049
      ||  ||||||||||||||| ||||||||| |||||||||||||||| |||
seq2  ATATCTCTCTCTTTTTCAG-TCTACATGTGGAGTCAGACCCTTTGA-GCT  1037

seq1  TGTGTTGTTGCCATTTTTTTTCCTTAAATAATTAGAACAGTTAAAGTATT  1099
      ||||||||   |||||||||  ||  |||||| ||||||||  |||||||
seq2  TGTGTTGT--GCATTTTTTT--CT--AATAATAAGAACAGT--AAGTATT  1079

seq1  -AGCATTTACAACACTTGTATATGCTCAATATTTATCCCAAATG-TATAC  1147
       ||||||   |||||||||| |||||||   ||||||   |||| |||||
seq2  AAGCATT---AACACTTGTAAATGCTCA--TTTTATC---AATGTTATAC  1121

seq1  CAACAAAACACCAGTGGATACTTTCAAATGCA-TTCTACAGA  1188
      ||||||||  ||||| ||| | | |||||||| |||||||||
seq2  CAACAAAAACCCAGT-GAT-CCTCCAAATGCATTTCTACAGA  1161

seq1: chr12_15317372_15318437
seq2: B6Ng01-091L06.g_66_1129 (reverse)

seq1  GAGATACTACATCGGT-AAAAATACATTAATAACCACTACATCATTAATT  49
      |||||||| | ||||| |||||| ||| |  ||||||||||||| |||||
seq2  GAGATACT-CTTCGGTAAAAAATCCATAATAAACCACTACATCA-TAATT  48

seq1  ATTCATCATCAGTTATTTTCATCCTGATGGGTTTGAAAGAAAAGATCTGA  99
      | ||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  A-TCATCATCAGTAATTTTCATCCTGATGGGTTTGAAAGAAAAGATCTGA  97

seq1  TGTGAATATTAGGAGAAAGATGAATATATGAAGGGAGATAGGTATGAA-G  148
      |||||||| || |||||||||||||||||||||||||||||||||||| |
seq2  TGTGAATA-TAAGAGAAAGATGAATATATGAAGGGAGATAGGTATGAAGG  146

seq1  GTTGATATCATTCACTCATCTGAAGTTACTGGTTACTCTAGAGAATTGGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATATCATTCACTCATCTGAAGTTACTGGTTACTCTAGAGAATTGGT  196

seq1  TTTTGTTTGTTTCTTTC-TTTCCTTACTACAGCACACCAATTCATAATGA  247
      ||||||||||||||||| |||||||||||||||||||| |||||||||||
seq2  TTTTGTTTGTTTCTTTCTTTTCCTTACTACAGCACACC-ATTCATAATGA  245

seq1  TTTCCTGTCATTATTACACTGTGTACAAAGATTTTCATTCTGTCACCAAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTCATTATTACACTGTGTACAAAGATTTTCATTCTGTCACCAAT  295

seq1  ATCGTGCAACCATGGACATTCACCCTTTAATCTTTATTTAATTTCATCTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGCAACCATGGACATTCACCCTTTAATCTTTATTTAATTTCATCTA  345

seq1  ACTTCAAAATGTTGTCTGCCTTTTGCATTTATTTATTTATTTATTTATGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAAATGTTGTCTGCCTTTTGCATTTATTTATTTATTTATTTATGT  395

seq1  ATTTATGTACTTTAATTTGATTTATTTTTCACTTATTCACTTTATGTCCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGTACTTTAATTTGATTTATTTTTCACTTATTCACTTTATGTCCT  445

seq1  ACTCACTACCCCCCTCCCAGTTGGTTGCCCCTGCTGCAATCCTTTCCACC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTACCCCCCTCCCAGTTGGTTGCCCCTGCTGCAATCCTTTCCACC  495

seq1  TCCCCTTCTCCTCTGAGAACGTAGGGCTCCCCTGGGTATGTTCGCCCCCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTCTCCTCTGAGAACGTAGGGCTCCCCTGGGTATGTTCGCCCCCA  545

seq1  CCTTGACACTTCAAATCTCTGCGAGGCTAGGTGCTAGGTGCTTCTGCTCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACACTTCAAATCTCTGCGAGGCTAGGTGCTAGGTGCTTCTGCTCC  595

seq1  TACTAAGGCCAGACAAGGCAGCCGAACTAGTTGAACATATCCCATGTACA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGGCCAGACAAGGCAGCCGAACTAGTTGAACATATCCCATGTACA  645

seq1  GGCAACAGCTTTTGGGATAACTCCCTTTCCAGTTGTTTGGGACCCACATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACAGCTTTTGGGATAACTCCCTTTCCAGTTGTTTGGGACCCACATG  695

seq1  AAGAGCAAGCTACTCATCTACTCCATATGTGCAGGAGGTATAGGTCCAGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAAGCTACTCATCTACTCCATATGTGCAGGAGGTATAGGTCCAGC  745

seq1  CCATGTATATTCTTTGGTTGGTGGTTCAGACTCTGAGGGCCCCAAGGGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTATATTCTTTGGTTGGTGGTTCAGACTCTGAGGGCCCCAAGGGTT  795

seq1  CAGGTTAGTTGACTCTTTTGGTCTTTTTGTGGAGTTCCTATTCCCTTTGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTAGTTGACTCTTTTGGTCTTTTTGTGGAGTTCCTATTCCCTTTGG  845

seq1  GGCCAGCAATCCTTCCTTCTATTTTTTTCATAATAGTCCCCCAGTTCTAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCAATCCTTCCTTCTATTTTTTTCATAATAGTCCCCCAGTTCTAT  895

seq1  TCACTGTTTGGCTATGTATGTCTGTATCTGTCTGAGTCAGCTGCTCGGTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTTTGGCTATGTATGTCTGTATCTGTCTGAGTCAGCTGCTCGGTG  945

seq1  GAGCCTCTCAGAAGACAACATGCTCCTCTCTGTATGCTTTAGGAGTCTTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCTCAGAAGACAACATGCTCCTCTCTGTATGCTTTAGGAGTCTTC  995

seq1  CTTTCAGGACTTAATTAAACATCATCTGTTGGAACACAGTCCAAGTATGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGGACTTAATTAAACATCATCTGTTGGAACACAGTCCAAGTATGG  1045

seq1  AGTCCTGTGATAGGAATTC  1066
      |||||||||||||||||||
seq2  AGTCCTGTGATAGGAATTC  1064