BAC Information

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BAC

Clone NameB6Ng01-092B17
Chromosome12 (Build37)
Map Location 90,182,014 - 90,315,458
singlet/doubletdoublet
Overlap geneNrxn3
Upstream geneLOC100039087, LOC100039100, LOC100039191, LOC100039203, LOC627873, LOC100039162, LOC627881, LOC100039129, LOC636517, LOC544884, LOC100039226, LOC432715, EG667350, LOC546543, EG667388, LOC627971, LOC667395, LOC100039315, EG638008, EG666862, EG435337, LOC100039154, LOC633093, LOC667440, LOC100039383, EG266459, LOC667475, LOC620915, LOC435314, Adck1, LOC100039261, EG666915
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092B17.bB6Ng01-092B17.g
ACCDH903958DH903959
length1,1761,137
definitionDH903958|Mus musculus domesticus DNA, BAC clone: B6Ng01-092B17, 5' end.DH903959|Mus musculus domesticus DNA, BAC clone: B6Ng01-092B17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,314,267 - 90,315,458)(90,182,014 - 90,183,161)
sequence
gaattcaatagagtatccatctctcaagggaatatagttacatggaataa
tgtttgtcaggcatgcacaaggccatgggttcttccttctgaggatttaa
actctcacttcctttcccccagagaaactgcattacttctgtcacattga
aggaagctggctgtctaccttccatctctaaaggtgagcccttcacaaaa
aaacaaaaacagaaacaaaacaaaataaaacaaacaaacaaacaaaaaaa
aaacaaaccttctctttgcctccaggctagcagctaggcaaaccaccaaa
aacagagagaaagcatgagataagatgaaaagctttttagctcatgtaaa
tttgagttgttgttcttcaattaacttcttagttcacagaatttgaagtg
aaaaagataatctgtgtctggagatgctttgaaaagcaaaggagttggaa
aagaaagcaaatccagtttattatttatatagggcagttctaattaaatc
aacatgttcgcagaggtaccaagcaacagaactcaggaggcagaggtagg
aggatctcatgagttcgagagcagctgggtctataaagtgaatttcaggg
cagctatggctgttaaacagaaaaaccctgtcttgaaaaaccaaaacaaa
taaaagaaaagaagaagataaacccagaagacatttcttctgaataaaag
acataaagcaggagtttggagctggagagataggttaggcagtaaattct
tgacacacaagcatgaaggcctcagttcaattcccaaaccagtccctaga
acacgtattagtttttgattttgttttaaaggccaggtatgttgacccaa
ttgtaatctctgcatagagaaggtgtaaatggttgatcttggcttgctgg
tcaggcaggttgacaaatctgcaagcacctggtccctgagaaccctatgt
ttcatataggtggatagctcctaagaggaatggcaatcaaattgctctcg
tcctccacgtttgtgcacacacaaagcaccacaaaacgcacactcgtaca
cacaaggaacacttctgtcatcggcatcattgtctctgaatatctggcta
attctaatcacagaaatctctgcattaattgttctgaattggctattcta
tcacacacaatccctctgacaatctt
gaattcttagacatgtgagagcctcctactgatcagtaggaggttcatga
tatttctgataaatggaataattgactgcttatttcttaaaggaaagcaa
gatgctgacacagtgtctaacatggtgggcagtatagtcagagagttcag
atttgaatctgtgcaagctctgttctttttgggaaagttaactctatgag
cctatacatgataactatcaaaataccttctgtaattcaccgaggcttaa
gtgaggtggtgcaggtcacttggcattgatcaataattatgaactaatta
ttaatttaacattatgattaacctgtgtattataattcatgttaactgtc
attattattacctgtagtagtttcttcatttataagcaagtgtcagtgct
ggagaaagtagtcatctgcattacagattcttgcaagaacacccttgaaa
tctgaaaagtgaagtaaaagtatttactagtaggtacctactagttgatt
tcaggtcaaaagactcataaagaatggaagaataatactttgttaagtaa
gataccttagcatttgaagttaaaatatagatgatttacttttgttgaaa
agcaaggctaagtaatagatcaattttgttcaacataagcatagttgtga
tccctagagtgttttaaaatagttgatggattagattagttttgcctttg
agagtctgaggaccaatgatgggttatatcttagaaatttggcttttcag
aggcctgggtccactaacgtatttaaaaggtagagcatcattctgtgacc
gggtcttgtaaatgccaaggcccattatagacagtgtaaaggaaaagatt
caacctgtgaaacaatgcaagaaatatgtgaactttttgtttacttttag
aaaatgttttattttgccacagttgcgcggggcaatgaagtgaatgaaat
tatagaagatacctggagataaagaatatcctttatgcatttcctttaca
caatttgtagcaaattgcgcataattcccattgactgggaaggcagagag
tcagggtactgggagcactgcaaggcttttctcaggttgctgtggtcgac
agctctcgaaggtcttatctgcactccccttcgtaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_90314267_90315458
seq2: B6Ng01-092B17.b_44_1219 (reverse)

seq1  AAGATTGTCAGAGG--ATGTGTGTGAATAGAATTAGCCAGATATTCAGAG  48
      ||||||||||||||   |||||||| |||||| ||||||   ||||||| 
seq2  AAGATTGTCAGAGGGATTGTGTGTG-ATAGAA-TAGCCA---ATTCAGA-  44

seq1  ACAATAGATGCCAGAGGATGTCTGTGAATAGAATTAGCCAGATATTCAGA  98
      |||||  ||| |||| ||| ||||||| ||||||||||||||||||||||
seq2  ACAATTAATG-CAGA-GATTTCTGTGATTAGAATTAGCCAGATATTCAGA  92

seq1  GACAATAGATGCCGATGACAGAAAGTGTTCTTTGTGTGTACGAGTGTGCG  148
      |||||| |||||||||||||| |||||||| |||||||||||||||||||
seq2  GACAAT-GATGCCGATGACAG-AAGTGTTCCTTGTGTGTACGAGTGTGCG  140

seq1  TTTTTGTGGGTGCTTTGTGTGTGCACAAACGTGGAGGACGGAGAGCAATT  198
       |||||| ||||||||||||||||||||||||||||||| |||||||| |
seq2  -TTTTGT-GGTGCTTTGTGTGTGCACAAACGTGGAGGAC-GAGAGCAA-T  186

seq1  TTGATTGCCATTCCTCCTTAGGAGCTATCCACCTTATATTGAAACATAGG  248
      ||||||||||||||| ||||||||||||||||| |||| |||||||||||
seq2  TTGATTGCCATTCCT-CTTAGGAGCTATCCACC-TATA-TGAAACATAGG  233

seq1  GTTTCTCAGGGACCAGGTGCTTGCAGATTTGTCAACCTGCCTGACCAGCA  298
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-TTCTCAGGGACCAGGTGCTTGCAGATTTGTCAACCTGCCTGACCAGCA  282

seq1  AGCCAAGATCAACCATTTACACCTTCTCTATGCAGAGATTACAATTGGGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGATCAACCATTTACACCTTCTCTATGCAGAGATTACAATTGGGT  332

seq1  CAACATACCTGGCCTTTAAAACAAAATCAAAAACTAATACGTGTTCTAGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATACCTGGCCTTTAAAACAAAATCAAAAACTAATACGTGTTCTAGG  382

seq1  GACTGGTTTGGGAATTGAACTGAGGCCTTCATGCTTGTGTGTCAAGAATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTTTGGGAATTGAACTGAGGCCTTCATGCTTGTGTGTCAAGAATT  432

seq1  TACTGCCTAACCTATCTCTCCAGCTCCAAACTCCTGCTTTATGTCTTTTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCTAACCTATCTCTCCAGCTCCAAACTCCTGCTTTATGTCTTTTA  482

seq1  TTCAGAAGAAATGTCTTCTGGGTTTATCTTCTTCTTTTCTTTTATTTGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAGAAATGTCTTCTGGGTTTATCTTCTTCTTTTCTTTTATTTGTT  532

seq1  TTGGTTTTTCAAGACAGGGTTTTTCTGTTTAACAGCCATAGCTGCCCTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTCAAGACAGGGTTTTTCTGTTTAACAGCCATAGCTGCCCTGA  582

seq1  AATTCACTTTATAGACCCAGCTGCTCTCGAACTCATGAGATCCTCCTACC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACTTTATAGACCCAGCTGCTCTCGAACTCATGAGATCCTCCTACC  632

seq1  TCTGCCTCCTGAGTTCTGTTGCTTGGTACCTCTGCGAACATGTTGATTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCTGAGTTCTGTTGCTTGGTACCTCTGCGAACATGTTGATTTA  682

seq1  ATTAGAACTGCCCTATATAAATAATAAACTGGATTTGCTTTCTTTTCCAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAACTGCCCTATATAAATAATAAACTGGATTTGCTTTCTTTTCCAA  732

seq1  CTCCTTTGCTTTTCAAAGCATCTCCAGACACAGATTATCTTTTTCACTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTGCTTTTCAAAGCATCTCCAGACACAGATTATCTTTTTCACTTC  782

seq1  AAATTCTGTGAACTAAGAAGTTAATTGAAGAACAACAACTCAAATTTACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTGTGAACTAAGAAGTTAATTGAAGAACAACAACTCAAATTTACA  832

seq1  TGAGCTAAAAAGCTTTTCATCTTATCTCATGCTTTCTCTCTGTTTTTGGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTAAAAAGCTTTTCATCTTATCTCATGCTTTCTCTCTGTTTTTGGT  882

seq1  GGTTTGCCTAGCTGCTAGCCTGGAGGCAAAGAGAAGGTTTGTTTTTTTTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGCCTAGCTGCTAGCCTGGAGGCAAAGAGAAGGTTTGTTTTTTTTT  932

seq1  TGTTTGTTTGTTTGTTTTATTTTGTTTTGTTTCTGTTTTTGTTTTTTTGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTGTTTTATTTTGTTTTGTTTCTGTTTTTGTTTTTTTGT  982

seq1  GAAGGGCTCACCTTTAGAGATGGAAGGTAGACAGCCAGCTTCCTTCAATG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGCTCACCTTTAGAGATGGAAGGTAGACAGCCAGCTTCCTTCAATG  1032

seq1  TGACAGAAGTAATGCAGTTTCTCTGGGGGAAAGGAAGTGAGAGTTTAAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGAAGTAATGCAGTTTCTCTGGGGGAAAGGAAGTGAGAGTTTAAAT  1082

seq1  CCTCAGAAGGAAGAACCCATGGCCTTGTGCATGCCTGACAAACATTATTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAAGGAAGAACCCATGGCCTTGTGCATGCCTGACAAACATTATTC  1132

seq1  CATGTAACTATATTCCCTTGAGAGATGGATACTCTATTGAATTC  1192
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAACTATATTCCCTTGAGAGATGGATACTCTATTGAATTC  1176

seq1: chr12_90182014_90183161
seq2: B6Ng01-092B17.g_69_1205

seq1  GAATTCTTAGACATGTGAGAGCCTCCTACTGATCAGTAGGAGGTTCATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGACATGTGAGAGCCTCCTACTGATCAGTAGGAGGTTCATGA  50

seq1  TATTTCTGATAAATGGAATAATTGACTGCTTATTTCTTAAAGGAAAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGATAAATGGAATAATTGACTGCTTATTTCTTAAAGGAAAGCAA  100

seq1  GATGCTGACACAGTGTCTAACATGGTGGGCAGTATAGTCAGAGAGTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGACACAGTGTCTAACATGGTGGGCAGTATAGTCAGAGAGTTCAG  150

seq1  ATTTGAATCTGTGCAAGCTCTGTTCTTTTTGGGAAAGTTAACTCTATGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAATCTGTGCAAGCTCTGTTCTTTTTGGGAAAGTTAACTCTATGAG  200

seq1  CCTATACATGATAACTATCAAAATACCTTCTGTAATTCACCGAGGCTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATACATGATAACTATCAAAATACCTTCTGTAATTCACCGAGGCTTAA  250

seq1  GTGAGGTGGTGCAGGTCACTTGGCATTGATCAATAATTATGAACTAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTGGTGCAGGTCACTTGGCATTGATCAATAATTATGAACTAATTA  300

seq1  TTAATTTAACATTATGATTAACCTGTGTATTATAATTCATGTTAACTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTAACATTATGATTAACCTGTGTATTATAATTCATGTTAACTGTC  350

seq1  ATTATTATTACCTGTAGTAGTTTCTTCATTTATAAGCAAGTGTCAGTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATTACCTGTAGTAGTTTCTTCATTTATAAGCAAGTGTCAGTGCT  400

seq1  GGAGAAAGTAGTCATCTGCATTACAGATTCTTGCAAGAACACCCTTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGTAGTCATCTGCATTACAGATTCTTGCAAGAACACCCTTGAAA  450

seq1  TCTGAAAAGTGAAGTAAAAGTATTTACTAGTAGGTACCTACTAGTTGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAAGTGAAGTAAAAGTATTTACTAGTAGGTACCTACTAGTTGATT  500

seq1  TCAGGTCAAAAGACTCATAAAGAATGGAAGAATAATACTTTGTTAAGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCAAAAGACTCATAAAGAATGGAAGAATAATACTTTGTTAAGTAA  550

seq1  GATACCTTAGCATTTGAAGTTAAAATATAGATGATTTACTTTTGTTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTTAGCATTTGAAGTTAAAATATAGATGATTTACTTTTGTTGAAA  600

seq1  AGCAAGGCTAAGTAATAGATCAATTTTGTTCAACATAAGCATAGTTGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGCTAAGTAATAGATCAATTTTGTTCAACATAAGCATAGTTGTGA  650

seq1  TCCCTAGAGTGTTTTAAAATAGTTGATGGATTAGATTAGTTTTGCCTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGAGTGTTTTAAAATAGTTGATGGATTAGATTAGTTTTGCCTTTG  700

seq1  AGAGTCTGAGGACCAATGATGGGTTATATCTTAGAAATTTGGCTTTTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTGAGGACCAATGATGGGTTATATCTTAGAAATTTGGCTTTTCAG  750

seq1  AGGCCTGGGTCCACTAACGTATTTAAAAGGTAGAGCATCATTCTGTGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGGGTCCACTAACGTATTTAAAAGGTAGAGCATCATTCTGTGACC  800

seq1  GGGTCTTGTAAATGCCAAGGCCCATTATAGACAGTGTAAGGGAAAAGATT  850
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGGTCTTGTAAATGCCAAGGCCCATTATAGACAGTGTAAAGGAAAAGATT  850

seq1  CAACCTGTGAAACAATGCAAGAAAATATGTGAACTTTTTGTTTACTTTTA  900
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAACCTGTGAAACAATGCAAG-AAATATGTGAACTTTTTGTTTACTTTTA  899

seq1  GAAAAATGTTTTATTTTGCCACAGTTGCGCGGGGCAATGAAGTGAATGAA  950
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-AAAATGTTTTATTTTGCCACAGTTGCGCGGGGCAATGAAGTGAATGAA  948

seq1  ATTATAAGAAAGAATACCTGGAGATAAAGAATATCCTTTATGCATTTTCC  1000
      ||||| ||||   ||||||||||||||||||||||||||||||| |||||
seq2  ATTAT-AGAA--GATACCTGGAGATAAAGAATATCCTTTATGCA-TTTCC  994

seq1  TTTACACCAATTTGTAGCAAAATGGCCGCATAA-TCCCATGACCTGGGAA  1049
      |||||| |||||||||||||| ||  ||||||| ||||||   |||||||
seq2  TTTACA-CAATTTGTAGCAAATTG--CGCATAATTCCCATTGACTGGGAA  1041

seq1  GGCAGAGAGTCAAGGTAACTGGAGCACTGCAAGGC-TTTCTCAAGTTGCC  1098
      |||||||||||| ||||   ||||||||||||||| ||||||| |||| |
seq2  GGCAGAGAGTCAGGGTACTGGGAGCACTGCAAGGCTTTTCTCAGGTTG-C  1090

seq1  TGTGTTCGACAGCTCTCGAAAGTTCTAATCTGCACTCCCACTTCTGTAAT  1148
      |||| ||||||||||||| ||| ||| |||||||||||| |||| |||||
seq2  TGTGGTCGACAGCTCTCG-AAGGTCTTATCTGCACTCCC-CTTC-GTAAT  1137