BAC Information

Click to search

BAC

Clone NameB6Ng01-092C05
Chromosome12 (Build37)12 (Build37)
Map Location 24,445,802 - 24,446,32223,463,924 - 23,464,152
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668680, LOC100042895, LOC100043435, EG628081, LOC100042903, LOC100043440, EG668518, LOC100043445, LOC668697, LOC100042923, LOC677338, EG668701
Downstream geneLOC668471, LOC668703, LOC546534, 9030624G23Rik, EG668710, LOC100042945, EG668711, EG668714, LOC629364, Taf1b, Grhl1, EG629383, Klf11, Cys1, Rrm2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092C05.bB6Ng01-092C05.g
ACCDH903980DH903981
length515254
definitionDH903980|Mus musculus domesticus DNA, BAC clone: B6Ng01-092C05, 5' end.DH903981|Mus musculus domesticus DNA, BAC clone: B6Ng01-092C05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(24,445,802 - 24,446,322)(23,463,924 - 23,464,152)
sequence
tagggctaaggaaaaaacctgtctccgtgggattccctaacttttcttat
ggtaaactgtatctggctaagactgtcttttcttttcctagtaaacaact
aactgaaaagcctggagctgcaggctctgactttatgatgctaattagtg
cttggtaggtgacttcctagttgaattttaagtagggcgttggaaccctg
gctaagtttgactgaacaaaattgaaatacacttattaagaataacacta
agttgatattcctccgcatttttggatgatgggcaggaaacagggagaag
gggtatgaccggctctgtagtacaaggccaattggctttttatttgggtg
ggaggcagtgaagggcttgccctttccgtgctttctcttggaagagacct
ctaggattagcatcaattctcatctaccttcagactctggtcctattttg
ttcagagcacttcctcagactaggtactgaattcccttcccttccctccc
ctcccctcccatccc
aacaaaggtgccaagagcgactcaatacactgggctgggctctgctccat
caatcattagttaagaaaataccctctggtcaggcatggtggcacatgtc
tttaatcggggctcataggagacaggaggcactctgtgagttcaaggctg
acctggtctaaaaagtgagttctagaacagccaggctgttacatagagga
accctgtttcaataaacaaaacaaaagggaggaaaggagggagagaggga
ggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_24445802_24446322
seq2: B6Ng01-092C05.b_45_565

seq1  GAATTCTAGGGCTAAGGAAAAAACCTGTCTCCGTGGGATTCCCTAACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGGCTAAGGAAAAAACCTGTCTCCGTGGGATTCCCTAACTTT  50

seq1  TCTTATGGTAAACTGTATCTGGCTAAGACTGTCTTTTCTTTTCCTAGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGGTAAACTGTATCTGGCTAAGACTGTCTTTTCTTTTCCTAGTAA  100

seq1  ACAACTAACTGAAAAGCCTGGAGCTGCAGGCTCTGACTTTATGATGCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTAACTGAAAAGCCTGGAGCTGCAGGCTCTGACTTTATGATGCTAA  150

seq1  TTAGTGCTTGGTAGGTGACTTCCTAGTTGAATTTTAAGTAGGGCGTTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGCTTGGTAGGTGACTTCCTAGTTGAATTTTAAGTAGGGCGTTGGA  200

seq1  ACCCTGGCTAAGTTTGACTGAACAAAATTGAAATACACTTATTAAGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGGCTAAGTTTGACTGAACAAAATTGAAATACACTTATTAAGAATA  250

seq1  ACACTAAGTTGATATTCCTCCGCATTTTTGGATGATGGGCAGGAAACAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAAGTTGATATTCCTCCGCATTTTTGGATGATGGGCAGGAAACAGG  300

seq1  GAGAAGGGGTATGACCGGCTCTGTAGTACAAGGCCAATTGGCTTTTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGGGTATGACCGGCTCTGTAGTACAAGGCCAATTGGCTTTTTATT  350

seq1  TGGGTGGGAGGCAGTGAAGGGCTTGCCCTTTCCGTGCTTTCTCTTGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGAGGCAGTGAAGGGCTTGCCCTTTCCGTGCTTTCTCTTGGAAG  400

seq1  AGACCTCTAGGATTAGCATCAATTCTCATCTACCTTCAGACTCTGGTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTCTAGGATTAGCATCAATTCTCATCTACCTTCAGACTCTGGTCCT  450

seq1  ATTTTGTTCAGAGCACTTCCTCAGACTAGGTACTGAATTCCCTTCCCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTCAGAGCACTTCCTCAGACTAGGTACTGAATTCCCTTCCCTTC  500

seq1  CCTCCCCTCCCCTCCCCTCCC  521
      |||||||||||||||| ||||
seq2  CCTCCCCTCCCCTCCCATCCC  521

seq1: chr12_23463924_23464152
seq2: B6Ng01-092C05.g_96_324

seq1  TACACTGGGCTGGGCTCTGCTCCATCAATCATTAGTTAAGAAAATACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGGGCTGGGCTCTGCTCCATCAATCATTAGTTAAGAAAATACCCT  50

seq1  CTGGTCAGGCATGGTGGCACATGTCTTTAATCGGGGCTCATAGGAGACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCAGGCATGGTGGCACATGTCTTTAATCGGGGCTCATAGGAGACAG  100

seq1  GAGGCACTCTGTGAGTTCAAGGCTGACCTGGTCTAAAAAGTGAGTTCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCACTCTGTGAGTTCAAGGCTGACCTGGTCTAAAAAGTGAGTTCTAG  150

seq1  AACAGCCAGGCTGTTACATAGAGGAACCCTGTTTCAATAAACAAAACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCAGGCTGTTACATAGAGGAACCCTGTTTCAATAAACAAAACAAA  200

seq1  AGGGAGGAAAGGAGGGAGAGAGGGAGGGA  229
      |||||||||||||||||||||||||||||
seq2  AGGGAGGAAAGGAGGGAGAGAGGGAGGGA  229