BAC Information

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BAC

Clone NameB6Ng01-092H17
Chromosome12 (Build37)16 (Build37)
Map Location 61,364,821 - 61,365,48387,885,358 - 87,885,455
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC665628, LOC238199, LOC665639, LOC665644, EG622488
Downstream geneLOC665665, Ppia-ps12_475.1, LOC100040300
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092H17.bB6Ng01-092H17.g
ACCDH904234DH904235
length979942
definitionDH904234|Mus musculus domesticus DNA, BAC clone: B6Ng01-092H17, 5' end.DH904235|Mus musculus domesticus DNA, BAC clone: B6Ng01-092H17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(61,364,821 - 61,365,483)(87,885,358 - 87,885,455)
sequence
gaattcaagtccaggtactttgctatgaaaactctaggacagctatgtaa
tgctgtttctcaaaattaagactaatgttaactttattgctgatatccac
tattcatatactgcattaaactgaacaaaaactttactgaaatgagttat
caaatcactttagccctgatactttctgttctccagtttcaatttatcaa
catattattaaaactgagccaacatttgttgcctgtgagctagtgagata
tccagtattactgttgactaaattgttgtacagaaggagtagcagttacc
atcttaaatattatggtgaaattgtgttgctgtccctattggttaaagga
agttactttcaaagtttcaggtgtactgaagtagattgaaataaaactgt
gcttaacagttgcacttcaagtgccaaagaatatattgatttgttctaca
tgccttaacaaaaaagaaacatttagaacagagtatgcaatcaaagctgt
tccagattgggcttaaagtaatccatcatcattctccatgtaccatttat
cttttgcaattagcaacctggagaattaatgacaatgtgatacaaataat
cacagccgaatctctcaagctctgacagttacactaatctctgccattcc
ctggagaatgaagaatcaccctttcattcattaccttcattactctggga
aagagtaagatgcagggacttctataatactccagtttagtggtctttat
gtcatcgatctaggcaaccaacataatgaaattaattagtttatatcaag
taataaaaaactggaaaataccttcctacccatcattgaaagaaatacaa
atgattcacagtatgcacatgacatgttatatgagaattctccttaacat
gcttgggccattatttggtttctataatctgttttaaaaatgaaaagaaa
gtaaaacaaaaaacacattcaagaagttt
gaattctcaccttaggaataccgaatggctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcaaatcaaaacaaccgtgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcctgcaatacatctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttgcacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctagagggcatcatcctgagtgaggtaacacaatcacaaa
agaactcaaatgatatgtactcactgataagtggatattagtccagaaac
ttagtatacctgagatataagatacaatttatttcattctatttgtaagg
cctttctttgagttttctagttagattgttgtgttttcgattccattttc
attttagcttgagtcctcttcaatgtttctatctctttactgaattccat
ttttcaaatcctctgttgtcttcattattcccactattttttttttatgt
ctttgaatttttgatgaagctttgtgggttgttttgtaaatatttattgt
gcagcattttcatctgggtcattcttattagcaaacacatctattaacac
tggtggccttgtggggggataaggtgaaattactacctcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_61364821_61365483
seq2: B6Ng01-092H17.b_42_704 (reverse)

seq1  CTTCATTCTCCAGGGAATGGCAGAGATTAGTGTAACTGTCAGAGCTTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTCTCCAGGGAATGGCAGAGATTAGTGTAACTGTCAGAGCTTGAG  50

seq1  AGATTCGGCTGTGATTATTTGTATCACATTGTCATTAATTCTCCAGGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCGGCTGTGATTATTTGTATCACATTGTCATTAATTCTCCAGGTTG  100

seq1  CTAATTGCAAAAGATAAATGGTACATGGAGAATGATGATGGATTACTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTGCAAAAGATAAATGGTACATGGAGAATGATGATGGATTACTTTA  150

seq1  AGCCCAATCTGGAACAGCTTTGATTGCATACTCTGTTCTAAATGTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAATCTGGAACAGCTTTGATTGCATACTCTGTTCTAAATGTTTCTT  200

seq1  TTTTGTTAAGGCATGTAGAACAAATCAATATATTCTTTGGCACTTGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTAAGGCATGTAGAACAAATCAATATATTCTTTGGCACTTGAAGT  250

seq1  GCAACTGTTAAGCACAGTTTTATTTCAATCTACTTCAGTACACCTGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGTTAAGCACAGTTTTATTTCAATCTACTTCAGTACACCTGAAAC  300

seq1  TTTGAAAGTAACTTCCTTTAACCAATAGGGACAGCAACACAATTTCACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAGTAACTTCCTTTAACCAATAGGGACAGCAACACAATTTCACCA  350

seq1  TAATATTTAAGATGGTAACTGCTACTCCTTCTGTACAACAATTTAGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTAAGATGGTAACTGCTACTCCTTCTGTACAACAATTTAGTCAA  400

seq1  CAGTAATACTGGATATCTCACTAGCTCACAGGCAACAAATGTTGGCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATACTGGATATCTCACTAGCTCACAGGCAACAAATGTTGGCTCAG  450

seq1  TTTTAATAATATGTTGATAAATTGAAACTGGAGAACAGAAAGTATCAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATAATATGTTGATAAATTGAAACTGGAGAACAGAAAGTATCAGGG  500

seq1  CTAAAGTGATTTGATAACTCATTTCAGTAAAGTTTTTGTTCAGTTTAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTGATTTGATAACTCATTTCAGTAAAGTTTTTGTTCAGTTTAATG  550

seq1  CAGTATATGAATAGTGGATATCAGCAATAAAGTTAACATTAGTCTTAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATATGAATAGTGGATATCAGCAATAAAGTTAACATTAGTCTTAATT  600

seq1  TTGAGAAACAGCATTACATAGCTGTCCTAGAGTTTTCATAGCAAAGTACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAACAGCATTACATAGCTGTCCTAGAGTTTTCATAGCAAAGTACC  650

seq1  TGGACTTGAATTC  663
      |||||||||||||
seq2  TGGACTTGAATTC  663

seq1: chr16_87885358_87885455
seq2: B6Ng01-092H17.g_533_640 (reverse)

seq1  GTGAGTACATATCATTTGAGT----------TTGGGTTGCCTCACTCAGG  40
      |||||||||||||||||||||          ||| ||| |||||||||||
seq2  GTGAGTACATATCATTTGAGTTCTTTTGTGATTGTGTTACCTCACTCAGG  50

seq1  ATAATGCCCTTCAGGTCCAACCATTTGCCTAGGAATTTCATAAATTCATT  90
      || |||||||  ||||||| ||||||||||||||||||||||||||||||
seq2  ATGATGCCCTCTAGGTCCATCCATTTGCCTAGGAATTTCATAAATTCATT  100

seq1  CTTTTTAA  98
      ||||||||
seq2  CTTTTTAA  108