BAC Information

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BAC

Clone NameB6Ng01-093A06
Chromosome12 (Build37)
Map Location 60,093,452 - 60,094,488
singlet/doubletsinglet
Overlap geneSec23a
Upstream geneSstr1, Clec14a, LOC100040183
Downstream geneSip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33, LOC665628, LOC238199, LOC665639, LOC665644, EG622488
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093A06.bB6Ng01-093A06.g
ACCDH904621DH904622
length1,1521,038
definitionDH904621|Mus musculus domesticus DNA, BAC clone: B6Ng01-093A06, 5' end.DH904622|Mus musculus domesticus DNA, BAC clone: B6Ng01-093A06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccatatggctgataagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
ttcatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtgtatgtggagaaataggaacactcctccattattggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggttgttcctca
gaaaattggacatagtactaccagaggatcccgcaatatctctcctgggc
atatatccagaagatgttccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcctatcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacatgatatgtactcacagataagtggatattagcccagaaac
ttagaatacccaagatacaagatacaatttgcaaacacatgaaaactcaa
gaagagcaaagacgaaactgtggacactttgatccttctgagaattggaa
acaaaacacccatggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatctagagactgccatacccggggatccatcccattat
cagcccccaaacgctgacaccatcgcacacactagcaagatgttgctgaa
aggaccctgatatagctgtctcttgtgaggctatgccgggcctagtaaca
cagaagtggatgctcacagtcagctaatggatggatcacaggtcccaatg
gaggagctagagaagtacccagagctaaagggtctgcaccctatagtgga
caacattatgaactaaccagtaccccccgagctcgtgtctctagctgcat
atgtatcagagatgacctagtcgcatcatgaaaggaaggccttggtcgtg
caactttattgcttcatacaaggaggcaaggcaaaaatgggagatggggg
gg
gaattcctcattatttcttgtgtgtcaatagcattcttttttatgtttcc
attttatttacttatttgaagttgtgtgtggcgctggggttcagcctgcg
ccttgagattgctgggaaagatttccctctgagctttgcttgcagccctg
cttccctatttttaaagaggcaggcaccctttctccatttcatgggcatc
atgtgataaagagaaagtagattggagtagttaatccattagcttcagtt
acacatataaataatgcttatgttttatttttattttttaatacagattc
tcataggcaaggctagactcaaacttgccatgtagccaaagctggttttg
aacttctgatcttcctttcccttcctaagtgctggggttacaggcatgaa
gactgtgtctggttttatgtggtgctggggatccaacctaggctttgtgg
atactaggcaagcattctagcaactgtgctgttacctaagccccagcaat
actcccattttaaatacagaaaacaagaataaaacccagaagacaatgtc
ttctcttttacccacttcaacagctacaaagcaggaaacataacctttgc
tatagggtaagtttagagattgctttaaaactaagaatgtagtactgttt
aggatttagaaagaaatctatccaaataaatgtcttccttttagcattta
cttattattattattattttttttcaagacagggtttctctgtatagtcc
tggctgttctggaactcactttgtagaccaggctggcctcaaactcagaa
atccgcctgcctctgcctcccgagtgctgggattaaaggcgtgcgccacc
acgcccggctttctttttttaataatgctttttttttttaaataaaggat
ttacttacttattgtatgtatgtgagtactcagtacacctgtcacttctt
cagacacacccagaagatggcattggatcccatttcagatggtgtgagcc
accatggtggttgctggggaattgaactcaagacctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_60093452_60094488
seq2: B6Ng01-093A06.g_70_1107 (reverse)

seq1  AGAGGTCCTGAGTTCAATT-CCCAGCAACCA-CATGGTGGCTCACAACCA  48
      ||||||| ||||||||||| ||||||||||| ||||||||||||| ||||
seq2  AGAGGTCTTGAGTTCAATTCCCCAGCAACCACCATGGTGGCTCAC-ACCA  49

seq1  TCTGAAATGGGATCCAATGCCATCTTCT-GGTGTGTCTGAAGAAAGTGAC  97
      |||||||||||||||||||||||||||| ||||||||||||| |||||||
seq2  TCTGAAATGGGATCCAATGCCATCTTCTGGGTGTGTCTGAAG-AAGTGAC  98

seq1  A-GTGTACTGAGTACTCACATACATACAATAAGTAAGTAAATCCTTTATT  146
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTACTGAGTACTCACATACATACAATAAGTAAGTAAATCCTTTATT  148

seq1  TAAAAAAAAAAAGCATTATTTAAAAAAAGAAAGCCGGGCGTGGTGGCGCA  196
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAAAGCATTA-TTAAAAAAAGAAAGCCGGGCGTGGTGGCGCA  197

seq1  CGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTT  247

seq1  TGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGAACAGCCAGGACTATAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGAACAGCCAGGACTATAC  297

seq1  AGAGAAACCCTGTCTTGAAAAAAAATAATAATAATAATAAGTAAATGCTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACCCTGTCTTGAAAAAAAATAATAATAATAATAAGTAAATGCTA  347

seq1  AAAGGAAGACATTTATTTGGATAGATTTCTTTCTAAATCCTAAACAGTAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGACATTTATTTGGATAGATTTCTTTCTAAATCCTAAACAGTAC  397

seq1  TACATTCTTAGTTTTAAAGCAATCTCTAAACTTACCCTATAGCAAAGGTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCTTAGTTTTAAAGCAATCTCTAAACTTACCCTATAGCAAAGGTT  447

seq1  ATGTTTCCTGCTTTGTAGCTGTTGAAGTGGGTAAAAGAGAAGACATTGTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCCTGCTTTGTAGCTGTTGAAGTGGGTAAAAGAGAAGACATTGTC  497

seq1  TTCTGGGTTTTATTCTTGTTTTCTGTATTTAAAATGGGAGTATTGCTGGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGTTTTATTCTTGTTTTCTGTATTTAAAATGGGAGTATTGCTGGG  547

seq1  GCTTAGGTAACAGCACAGTTGCTAGAATGCTTGCCTAGTATCCACAAAGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGGTAACAGCACAGTTGCTAGAATGCTTGCCTAGTATCCACAAAGC  597

seq1  CTAGGTTGGATCCCCAGCACCACATAAAACCAGACACAGTCTTCATGCCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTGGATCCCCAGCACCACATAAAACCAGACACAGTCTTCATGCCT  647

seq1  GTAACCCCAGCACTTAGGAAGGGAAAGGAAGATCAGAAGTTCAAAACCAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCCCAGCACTTAGGAAGGGAAAGGAAGATCAGAAGTTCAAAACCAG  697

seq1  CTTTGGCTACATGGCAAGTTTGAGTCTAGCCTTGCCTATGAGAATCTGTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCTACATGGCAAGTTTGAGTCTAGCCTTGCCTATGAGAATCTGTA  747

seq1  TTAAAAAATAAAAATAAAACATAAGCATTATTTATATGTGTAACTGAAGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATAAAAATAAAACATAAGCATTATTTATATGTGTAACTGAAGC  797

seq1  TAATGGATTAACTACTCCAATCTACTTTCTCTTTATCACATGATGCCCAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGATTAACTACTCCAATCTACTTTCTCTTTATCACATGATGCCCAT  847

seq1  GAAATGGAGAAAGGGTGCCTGCCTCTTTAAAAATAGGGAAGCAGGGCTGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGAGAAAGGGTGCCTGCCTCTTTAAAAATAGGGAAGCAGGGCTGC  897

seq1  AAGCAAAGCTCAGAGGGAAATCTTTCCCAGCAATCTCAAGGCGCAGGCTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAGCTCAGAGGGAAATCTTTCCCAGCAATCTCAAGGCGCAGGCTG  947

seq1  AACCCCAGCGCCACACACAACTTCAAATAAGTAAATAAAATGGAAACATA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAGCGCCACACACAACTTCAAATAAGTAAATAAAATGGAAACATA  997

seq1  AAAAAGAATGCTATTGACACACAAGAAATAATGAGGAATTC  1037
      |||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAATGCTATTGACACACAAGAAATAATGAGGAATTC  1038