BAC Information

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BAC

Clone NameB6Ng01-093K23
Chromosome12 (Build37)
Map Location 90,126,851 - 90,281,784
singlet/doubletdoublet
Overlap geneNrxn3
Upstream geneLOC100039052, LOC100039076, LOC100039087, LOC100039100, LOC100039191, LOC100039203, LOC627873, LOC100039162, LOC627881, LOC100039129, LOC636517, LOC544884, LOC100039226, LOC432715, EG667350, LOC546543, EG667388, LOC627971, LOC667395, LOC100039315, EG638008, EG666862, EG435337, LOC100039154, LOC633093, LOC667440, LOC100039383, EG266459, LOC667475, LOC620915, LOC435314, Adck1, LOC100039261, EG666915
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093K23.bB6Ng01-093K23.g
ACCDH905103DH905104
length1,1301,011
definitionDH905103|Mus musculus domesticus DNA, BAC clone: B6Ng01-093K23, 5' end.DH905104|Mus musculus domesticus DNA, BAC clone: B6Ng01-093K23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,126,851 - 90,127,987)(90,280,777 - 90,281,784)
sequence
gaattcactaagtgaggtaggtaggcaggtcagtgagccccaggggtctg
cttgtttctaccttattagtgtttgtattacaagtgcagggcactatacc
tggcttgttttctttcctaaacgtgggtactaggactataattcagtttc
tcgtgattagattataagcattttactaactgagccatcacccagcccta
gaaacttcttactaataagatagaagattagaactagtttatggaaaggg
aaattttgtgaattcagagctcccaggtggctggatagtccagtacttgg
gggttctattcctttgttcctggtggaagaataaccaccaggtggcctcc
tattttggagattaattttataaggtttcaccaccattggctgaagtatc
tcatgaggccagccgtgataacccttgtaacaagcaggggatgaaagact
taatatctatgaaagaataagggaagactagagaagtagataataggtct
tgggtgggattcttttcagataacttaaacaaactaggaaggagtcatgc
aagctcccacttcaaggttactctccttttctctcaccctcaccccatca
gccttgctgatttaaaacacagagcttctccaaatccttattgactttta
gaaacccttctagtctcaagtccttacttgaggtggtaaaaataactggg
cattgtcaagatgtggacattggctccctggggagggaaaaaggaacttc
agtattgttctctttttctctcttttagactttcacagggtgctctcata
tcttgtgcattgccaagggtgttgggcactttgtcagctgttttggtgcc
attgataatttccacataagttgatatcttgtttcttaaggtggttgaaa
aaaaacctcaatgttaaacttttttcaatttttcttatcagtatcaccat
tctgtttatatgactgattattttgcatatcattaaatattaatttattt
acaataaaattaaaaaatttcataagataaaccagatgttattaagttaa
acagaacttgaggtgttatttaatggtttacagggacagggacccaaatg
cagttgaagcctgttacccaccctctgctg
gaattctcatctgaggaatagcgaatggctgagaaacacctgaaaaaatg
ttcagcacccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcagaaattcagatgctggt
gaggatatggagaaagaggaacactcctacattgttggtgggattacaag
cttgtacaaccactctggaaatcagtcgggtggttcctcagaaaattgga
catagtactaccagaggatccagcaatacctctcctgggcatatatccag
aagatgttccaactggtaagaaagatacatgctccactatgttcatagca
gccttatttataatagccagaagctggaaagaatccaggtgtccttcaac
agaggaatggatacagaaaatgtggtacatttacacaatggagtacccct
ccaatagtaattcttaaaatattctcagcaaaaaccttgacagtccagta
ggaacaaatctcaaatccagagattatggactaagataacttgtcactga
atgtttcaaaccctttaccttggataacagagagggaagtggaaattgtc
tttttaaaatctgttctgtgtgataggcctataatttacatcatatataa
tgtctcatttcaactctaactatagaatgaccttgatatgtgatcaatat
ttatcctcatgagaaacagaggctaagagaggcagactactttgaacaga
atcagtgctagccagtctatccagggacaggagttaagtctacacatctc
tagttctaagtgccaattcttacactgctggtagggctctcccaatagga
cttaagaaagaaatagtaagcaggaaaacttttagacactgttccaagtg
taaagtgcagagacatcacttggtgggttgtgatttctatttttttgtga
tgcattgatgatgtgttggtttgaaatgtggaagtttgtctcccaatcag
aagaaaactgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_90126851_90127987
seq2: B6Ng01-093K23.b_48_1177

seq1  GAATTCACTAAGTGAGGTAGGTAGGCAGGTCAGTGAGCCCCAGGGGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAAGTGAGGTAGGTAGGCAGGTCAGTGAGCCCCAGGGGTCTG  50

seq1  CTTGTTTCTACCTTATTAGTGTTTGTATTACAAGTGCAGGGCACTATACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTCTACCTTATTAGTGTTTGTATTACAAGTGCAGGGCACTATACC  100

seq1  TGGCTTGTTTTCTTTCCTAAACGTGGGTACTAGGACTATAATTCAGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGTTTTCTTTCCTAAACGTGGGTACTAGGACTATAATTCAGTTTC  150

seq1  TCGTGATTAGATTATAAGCATTTTACTAACTGAGCCATCACCCAGCCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGATTAGATTATAAGCATTTTACTAACTGAGCCATCACCCAGCCCTA  200

seq1  GAAACTTCTTACTAATAAGATAGAAGATTAGAACTAGTTTATGGAAAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTCTTACTAATAAGATAGAAGATTAGAACTAGTTTATGGAAAGGG  250

seq1  AAATTTTGTGAATTCAGAGCTCCCAGGTGGCTGGATAGTCCAGTACTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTGTGAATTCAGAGCTCCCAGGTGGCTGGATAGTCCAGTACTTGG  300

seq1  GGGTTCTATTCCTTTGTTCCTGGTGGAAGAATAACCACCAGGTGGCCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTATTCCTTTGTTCCTGGTGGAAGAATAACCACCAGGTGGCCTCC  350

seq1  TATTTTGGAGATTAATTTTATAAGGTTTCACCACCATTGGCTGAAGTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGAGATTAATTTTATAAGGTTTCACCACCATTGGCTGAAGTATC  400

seq1  TCATGAGGCCAGCCGTGATAACCCTTGTAACAAGCAGGGGATGAAAGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGGCCAGCCGTGATAACCCTTGTAACAAGCAGGGGATGAAAGACT  450

seq1  TAATATCTATGAAAGAATAAGGGAAGACTAGAGAAGTAGATAATAGGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCTATGAAAGAATAAGGGAAGACTAGAGAAGTAGATAATAGGTCT  500

seq1  TGGGTGGGATTCTTTTCAGATAACTTAAACAAACTAGGAAGGAGTCATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGATTCTTTTCAGATAACTTAAACAAACTAGGAAGGAGTCATGC  550

seq1  AAGCTCCCACTTCAAGGTTACTCTCCTTTTCTCTCACCCTCACCCCATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCCACTTCAAGGTTACTCTCCTTTTCTCTCACCCTCACCCCATCA  600

seq1  GCCTTGCTGATTTAAAACACAGAGCTTCTCCAAATCCTTATTGACTTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCTGATTTAAAACACAGAGCTTCTCCAAATCCTTATTGACTTTTA  650

seq1  GAAACCCTTCTAGTCTCAAGTCCTTACTTGAGGTGGTAAAAATAACTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTTCTAGTCTCAAGTCCTTACTTGAGGTGGTAAAAATAACTGGG  700

seq1  CATTGTCAAGATGTGGACATTGGCTCCCTGGGGAGGGAAAAAGGAACTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCAAGATGTGGACATTGGCTCCCTGGGGAGGGAAAAAGGAACTTC  750

seq1  AGTATTGTTCTCTTTTTCTCTCTTTTAGACTTTCACAGGGTGCTCTCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTGTTCTCTTTTTCTCTCTTTTAGACTTTCACAGGGTGCTCTCATA  800

seq1  TCTTGTGCATTGCCAAGGGTGTTGGGCACTTTGTCAGCTGTTTTGGTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGCATTGCCAAGGGTGTTGGGCACTTTGTCAGCTGTTTTGGTGCC  850

seq1  ATTGATAATTTCCACATAAGTTGATATCTTGTTTCTTAAGGTGGTTGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATAATTTCCACATAAGTTGATATCTTGTTTCTTAAGGTGGTTGAAA  900

seq1  AAAAACCTCAATTGTTAAACTTTTTTCAATTTTTCTTATCAGTATCACCA  950
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCTCAA-TGTTAAACTTTTTTCAATTTTTCTTATCAGTATCACCA  949

seq1  TTCTGTTTAATAATGACTGATTATTTTGCAATATCATTAAATTATTAATT  1000
      |||||||||   ||||||||||||||||| ||||||||||| ||||||||
seq2  TTCTGTTTA--TATGACTGATTATTTTGC-ATATCATTAAA-TATTAATT  995

seq1  TATTTACAATAAAATTAAAAAATTTCAATAAGATACACCAGATGTTA-TC  1049
      |||||||||||||||||||||||||| |||||||| ||||||||||| | 
seq2  TATTTACAATAAAATTAAAAAATTTC-ATAAGATAAACCAGATGTTATTA  1044

seq1  AGTTAAACAGAACTGAAGGTGTTATTTAAATGGTTTACAGGAACCAGGAA  1099
      ||||||||||||||  ||||||||||| ||||||||||||| | |||| |
seq2  AGTTAAACAGAACTTGAGGTGTTATTT-AATGGTTTACAGGGA-CAGGGA  1092

seq1  CCAAAATGCAGTTGAAGCCTGTTACCCACCCTCTGCTG  1137
      || |||||||||||||||||||||||||||||||||||
seq2  CCCAAATGCAGTTGAAGCCTGTTACCCACCCTCTGCTG  1130

seq1: chr12_90280777_90281784
seq2: B6Ng01-093K23.g_70_1080 (reverse)

seq1  ACAGTTTTGTACTGACTGGGAGACCAAC-TCCACATTTCCAAACCAAACA  49
      |||||||| | |||| |||||||| ||| ||||||||| |||||| ||||
seq2  ACAGTTTTCTTCTGATTGGGAGACAAACTTCCACATTT-CAAACC-AACA  48

seq1  CATCATCACTGCATCAC-AAAAGATAGAAATCACAA-CCACCAAGTGATG  97
      |||||||| |||||||| |||| ||||||||||||| |||||||||||||
seq2  CATCATCAATGCATCACAAAAAAATAGAAATCACAACCCACCAAGTGATG  98

seq1  TCTCTGCACTTTACACTTGGAACAGTGTCTAAAAGTTTTCCTGCTTACTA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCACTTTACACTTGGAACAGTGTCTAAAAGTTTTCCTGCTTACTA  148

seq1  TTTCTTTCTTAAGTCCTATTGGGAGAGCCCTACCAGCAGTGTAGGAATTG  197
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTTCTTTCTTAAGTCCTATTGGGAGAGCCCTACCAGCAGTGTAAGAATTG  198

seq1  GCACTTAGAACTAGAGATGTGTAGACTTAACTCCTGT-CCTGGATAGACT  246
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GCACTTAGAACTAGAGATGTGTAGACTTAACTCCTGTCCCTGGATAGACT  248

seq1  GGCTAGCACTGATTCTGTTC-AAGTAGTCTGCCTCTCTTAGCCTCTGTTT  295
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GGCTAGCACTGATTCTGTTCAAAGTAGTCTGCCTCTCTTAGCCTCTGTTT  298

seq1  CTCATGAGGATAAATATTGATCACATATCAAGGTCATTCTATAGTTAGAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAGGATAAATATTGATCACATATCAAGGTCATTCTATAGTTAGAG  348

seq1  TTGAAATGAGACATTATATATGATGTAAATTATAGGCCTATCACACAGAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATGAGACATTATATATGATGTAAATTATAGGCCTATCACACAGAA  398

seq1  CAGATTTTAAAAAGACAATTTCCACTTCCCTCTCTGTTATCCAAGGTAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTTAAAAAGACAATTTCCACTTCCCTCTCTGTTATCCAAGGTAAA  448

seq1  GGGTTTGAAACATTCAGTGACAAGTTATCTTAGTCCATAATCTCTGGATT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGAAACATTCAGTGACAAGTTATCTTAGTCCATAATCTCTGGATT  498

seq1  TGAGATTTGTTCCTACTGGACTGTCAAGGTTTTTGCTGAGAATATTTTAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTTGTTCCTACTGGACTGTCAAGGTTTTTGCTGAGAATATTTTAA  548

seq1  GAATTACTATTGGAGGGGTACTCCATTGTGTAAATGTACCACATTTTCTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTACTATTGGAGGGGTACTCCATTGTGTAAATGTACCACATTTTCTG  598

seq1  TATCCATTCCTCTGTTGAAGGACACCTGGATTCTTTCCAGCTTCTGGCTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATTCCTCTGTTGAAGGACACCTGGATTCTTTCCAGCTTCTGGCTA  648

seq1  TTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTATCTTTCTTACCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTATCTTTCTTACCA  698

seq1  GTTGGAACATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAACATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTC  748

seq1  TGGTAGTACTATGTCCAATTTTCTGAGGAACCACCCGACTGATTTCCAGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGTACTATGTCCAATTTTCTGAGGAACCACCCGACTGATTTCCAGA  798

seq1  GTGGTTGTACAAGCTTGTAATCCCACCAACAATGTAGGAGTGTTCCTCTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTGTACAAGCTTGTAATCCCACCAACAATGTAGGAGTGTTCCTCTT  848

seq1  TCTCCATATCCTCACCAGCATCTGAATTTCTGATCTTAGCCATTCTGACT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATATCCTCACCAGCATCTGAATTTCTGATCTTAGCCATTCTGACT  898

seq1  GGTGTGAGATGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGAGATGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGAT  948

seq1  TAAGGGTGCTGAACATTTTTTCAGGTGTTTCTCAGCCATTCGCTATTCCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGTGCTGAACATTTTTTCAGGTGTTTCTCAGCCATTCGCTATTCCT  998

seq1  CAGATGAGAATTC  1008
      |||||||||||||
seq2  CAGATGAGAATTC  1011