BAC Information

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BAC

Clone NameB6Ng01-094J04
Chromosome12 (Build37)
Map Location 43,204,246 - 43,205,203
singlet/doubletsinglet
Overlap genenone
Upstream geneLrrn3, Immp2l, EG638533
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094J04.bB6Ng01-094J04.g
ACCDH905755DH905756
length1,2631,170
definitionDH905755|Mus musculus domesticus DNA, BAC clone: B6Ng01-094J04, 5' end.DH905756|Mus musculus domesticus DNA, BAC clone: B6Ng01-094J04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcaggcttcttgtatgttcatgggcatctcttctttaggtttg
gaaagttttcttctataattttgttgaagatatttgctgtccctttaagt
ggaaaatattcattctcatctactcctattatccataggtttggtcttct
cattgtgtcctagatttcctggatgctttgagttaggatgtttttgcctt
ttgcattgtctttgattgttgtgccaatgttctctatgcaatcttctgca
cctgagattctctcttccatctcttgtattctgttgctaatgctcgcatc
tatggttccagatttctttcctagagtttctatctctagcattgcctcac
tttgggttttctttattgtttctactttcctgtttaggtcttgtatggtt
ttgttcatttccatcacctatttggatatgttttcctgtttttctttaag
gacttctacctgtttggttgtgttttcctgtttttctttaaggacttgta
acactttagcagtgttctcctgtatttctttaagtgagttattaaagtcc
ttctttatgtcctccaccatcatcatgagatatgcctttaaatccgggtc
ttacttttcagatgtgttggggtgcccaggactggctgaggtgggagtac
tgggttctgatgatgagtgagtggtcttggtttttgttagtaagattctt
atgtttgcctttttccatctggtaatctctggagttagttgttatagttg
tctctggataaagcttgttcctctcctgattctgttagcctctatcagca
gacctgggagtctagctctttcctgagtttcagtggttagagcactctct
gcaggtaagtctcctcttgtaggtagtgtggacatatatctggtgtttgg
acctgcctcctgggctgagatgaagcctgaaacaggcccggacgtctgga
gcccaaaattgggtctgcttcagaagctctgtgcttctggctgtcccagt
agctgttagcttctgtagttcaactctctcacctgggcagactaattctt
ggcagatcccgggaccagattgcttccccgaatgctcaagttagtagcct
taataggactagaaatttcatttgaatccttgtcgaattgctttaacatt
aacattccaatcgaagcctttaagttcaaataaatttaataccaatcgtc
tagaagactggtaagttcctttcctgtcctccacgtgttatttacgtaca
ggtgcctccttgt
gaattctttgcttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattagatattagtccc
ctatctgatttaggattggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacagtgtcttttgccttgcagaagctttgcaattttc
tgaggtctcatttgttgattctcaatcttatagcacaagctactgatgtt
ctatttaggaattttttcccctgtgctcatatcatcgagacttttcccca
ctttctcctctataaatttcactgtctcttggttttatgtggagtttctt
gatccacttagatttgaccttagtacaaggagataggaatggatcaattc
gcattcttctacatgataactgccagttgtgccagcaccattatttgaaa
atgctgtctttggtctctgcctttctaataaatctcctactccaaatctc
atatttctattatcacagttttattttccctatgtgtgaacttggagtgg
ctggagttcctagctatattgttcttttgtgtatgtttctttcttcaatt
aattttattaagactcacttgttttatgtatttgtaattagttgattttc
attgctgcatggtattttattgttggaatacacacagattattttatttt
agttctcttctcctgtttaagtacttggtgtttcatattaaaaacatata
tggacctccagctttcctgattcattggctatgggatcatatctgagaat
ctacatttttaaccaagtaccacagataattatgaggaagttgagttgca
gaacacactttatgaaaaccaacatcgatagtgaaacttttctctctagt
ttcatcacattatttcttttatactgcatgtgtgtaagaggtcttagcag
ttccattgtcccctgtttgtgtacaatttggagtttgaccatcatccttc
tctagctttatttccacaagttttcagtctttgagtcatgacccttgggt
tcacagggtcacatattagaatattctgcatatctgataacattatgatc
attacgtagtaaattacagtttgaagtaaaacaaaaatatgtgtgtcatg
gcattccccaccgaatttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_43204246_43205203
seq2: B6Ng01-094J04.g_301_1236

seq1  ACAAGCTACTGATGTTCTATTTAGGAATTTTTTCCCCTGTGCTCATATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTACTGATGTTCTATTTAGGAATTTTTTCCCCTGTGCTCATATCA  50

seq1  TCGAGACTTTTCCCCACTTTCTCCTCTATAAATTTCACTGTCTCTTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGACTTTTCCCCACTTTCTCCTCTATAAATTTCACTGTCTCTTGGTT  100

seq1  TTATGTGGAGTTTCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGGAGTTTCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGAT  150

seq1  AGGAATGGATCAATTCGCATTCTTCTACATGATAACTGCCAGTTGTGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGGATCAATTCGCATTCTTCTACATGATAACTGCCAGTTGTGCCA  200

seq1  GCACCATTATTTGAAAATGCTGTCTTTGGTCTCTGCCTTTCTAATAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATTATTTGAAAATGCTGTCTTTGGTCTCTGCCTTTCTAATAAATC  250

seq1  TCCTACTCCAAATCTCATATTTCTATTATCACAGTTTTATTTTCCCTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTCCAAATCTCATATTTCTATTATCACAGTTTTATTTTCCCTATG  300

seq1  TGTGAACTTGGAGTGGCTGGAGTTCCTAGCTATATTGTTCTTTTGTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACTTGGAGTGGCTGGAGTTCCTAGCTATATTGTTCTTTTGTGTAT  350

seq1  GTTTCTTTCTTCAATTAATTTTATTAAGACTCACTTGTTTTATGTATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTCTTCAATTAATTTTATTAAGACTCACTTGTTTTATGTATTTG  400

seq1  TAATTAGTTGATTTTCATTGCTGCATGGTATTTTATTGTTGGAATACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGTTGATTTTCATTGCTGCATGGTATTTTATTGTTGGAATACACA  450

seq1  CAGATTATTTTATTTTAGTTCTCTTCTCCTGTTTAAGTACTTGGTGTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTATTTTATTTTAGTTCTCTTCTCCTGTTTAAGTACTTGGTGTTTC  500

seq1  ATATTAAAAACATATATGGACCTCCAGCTTTCCTGATTCATTGGCTATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAAAACATATATGGACCTCCAGCTTTCCTGATTCATTGGCTATGG  550

seq1  GATCATATCTGAGAATCTACATTTTTAACCAAGTACCACAGATAATTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATATCTGAGAATCTACATTTTTAACCAAGTACCACAGATAATTATG  600

seq1  AGGAAGTTGAGTTGCAGAACACACTTTATGAAAACCAACATCGATAGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGGAAGTTGAGTTGCAGAACACACTTTATGAAAACCAACATCGATAGTG-  649

seq1  AAACTTTTCTCTCTAGTTTCATCACATTATTTCTTTTATACTGCATGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTTCTCTCTAGTTTCATCACATTATTTCTTTTATACTGCATGTGT  699

seq1  GTAAGGAGGTCTTAGCAGGTTCCATTGTTCCCCTGTTTGTGTACAATTT-  749
      |||| |||||||||||| ||||||||| ||||||||||||||||||||| 
seq2  GTAA-GAGGTCTTAGCA-GTTCCATTG-TCCCCTGTTTGTGTACAATTTG  746

seq1  GAGTTTGAACCATTCATCCTTCCTCTAAGGCTTTATTTCCAC-AGTTTTC  798
      ||||||| |||| |||||||| |||||  ||||||||||||| |||||||
seq2  GAGTTTG-ACCA-TCATCCTT-CTCTA--GCTTTATTTCCACAAGTTTTC  791

seq1  AGTCTTTGAGTCATGACCCCTTTGGGTTTCACAGGGGTCACATATTAG-A  847
      |||||||||||||||||||  ||||| |||||| |||||||||||||| |
seq2  AGTCTTTGAGTCATGACCC--TTGGG-TTCACA-GGGTCACATATTAGAA  837

seq1  TATTCTGCATATCTGATAACATTATGATTCATTACAGTAGTAAAATTACA  897
      ||||||||||||||||||||||||||| ||||||| ||||| ||||||||
seq2  TATTCTGCATATCTGATAACATTATGA-TCATTAC-GTAGT-AAATTACA  884

seq1  GTTTTGAAGTAACAACAAAAATAATGT-TGTCATGGCATTCACCACAACA  946
      | |||||||||| ||||||||| |||| ||||||||||||| ||||    
seq2  G-TTTGAAGTAA-AACAAAAAT-ATGTGTGTCATGGCATTCCCCAC----  927

seq1  CGAGGAATTTTA  958
          ||||||||
seq2  ---CGAATTTTA  936