BAC Information

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BAC

Clone NameB6Ng01-095B18
Chromosome12 (Build37)
Map Location 113,435,689 - 113,609,811
singlet/doubletdoublet
Overlap genenone
Upstream geneTraf3, Amn, Cdc42bpb, A230065H16Rik, 1200009I06Rik, Tnfaip2, Gm266, Eif5, Mark3, Ckb, 6720458F09Rik, Bag5, 2810002N01Rik, Klc1, Xrcc3, Zfyve21, Ppp1r13b, LOC100041886, 2010107E04Rik, BC048943, Tdrd9, A530050D06Rik, Kif26a
Downstream geneA730018C14Rik, A530016L24Rik, Tmem179, 2610204M08Rik, Adssl1, Siva1, Akt1, EG382639, AW555464, LOC382640, Pld4, AI450948, LOC100041194, BC022687, Cdca4, Gpr132, Jag2, Nudt14, Brf1, Btbd6, Pacs2, Tex22, Mta1, Crip2, Crip1, 4930427A07Rik, LOC676349, Tmem121, Igh, Igh-2, Gm900, Igh-1b, Igh-3, Ighg1, AI324046
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095B18.bB6Ng01-095B18.g
ACCDH906137DH906138
length1,1201,065
definitionDH906137|Mus musculus domesticus DNA, BAC clone: B6Ng01-095B18, 5' end.DH906138|Mus musculus domesticus DNA, BAC clone: B6Ng01-095B18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,608,688 - 113,609,811)(113,435,689 - 113,436,772)
sequence
gaattcttaggtggagaacagctgtgaagagcaggcaggcatttatgcag
caggacaggagcccaacagactcttcagggagatggggggcatagggacc
ccagatccgcagcaaagtaggggctgctttgtgggacagatagattcctg
ctttaagggcagagagagagagaagatacctccccaccaggtactcagaa
gacatctgtggctgtgactctccagccatcctctaccacggacctacact
cagacacagcctcttctccaacttgctgctactcatagtacctgcctcac
tgggcctcacagagcaggaccgtgggaaggtagtagaaagcagtgctttg
ctgagggttcagtctccatcccaggcctctgagaaggcagagttcctgat
tgggcttctaaccaggatcctttctgcctctcacatctcttagccaccgc
cccgtggctgcaggctttggcgtgctagatgagcattatcaggcgtgcct
gaggagaccaagatggcttctcaatggacaggccatcactgcagaaatat
tctaggtcgccagccatcaagggaggcgaaggttgaagctctccagagct
gtacaaaaccaaggctctgagagaggaggcttgttaattccactgccagc
tgggaactgtgcacagggtcacttgacaaaggtcacactactgattgaag
ggttctcagtcagagagaggtggtatttgcccagggatacagaagagtag
atgccaccatgctgggacgctctccgaggagcagcagagtcctgagacag
aggggacattgctctcaagtctggctcttggtcacatgcataactccagg
agttctgtgtgaaaaactgaagaaggtttgacctcattcagggatggcct
atgtcgtgacatcatgacacgtgatgtcaccatgtcgctctgagcagcct
tgtgggccctgggcttgagtgccgctgcttgggctgtcggggaggccatt
gtgtaagcacagagcacactttacagctgggtagttaaacatgagggcca
gagcctcccagtctctactctccctatctggtgtttttttttttcccagt
catgaaccaggctcagcacg
gaattcttttttttctggggcagtcccagggactaagtaggattttagtt
gtaagaggtgaggctggagccaaagccagctggtgggcagagagggagga
atgaggacactccattcctctctgcctggagatccagagcctctcccgag
cgacctcctcctcttcccccatcctgatgccaatcaaccccgcccttgct
ctcactggccacactcacaccgtctgccctccacagctgcagagttcccc
atgggaggcagagccagagtctctgaagctcccctagccacatggggcct
tcatgcctagcactaccagcctagggacaaaggactgtcttccccagctc
accttcgttaagatttctgttgttgtgataaaacattggcaacatgggaa
aggaagggttaatttctcctcacactgtcaggccacagtcccataactga
ggaaactcagggcaggaacctggaggtaggagatgatccagggccatgga
ggaatgctgcttactggtcactgccattggcaggctgactccgaaagttg
gtactctgtccgtactgagttgtcctttgatgagtatctgtgtctctgtc
ttcttctctcatgagaatacagactaggtgatgtctgacctagggtcttt
gctatctcagtcacttctttaatggacccatcttttaatacacttccatg
ctgaggtcctggggacagggtatcaacatgggaagtctgggagggattgc
ccttagaccagaacacccttaatcatcatctgtccccctgggctggcact
tagtgctgtggtccagctggcctctactctacagactctgagaatcacct
cccagcccacacacccggcttgtgcattctgctctctcagagcctctgca
gaagcgtgtgatgaacccagaatatcattagattcactggacatctgctt
ctcagaggccagttgtagaacccagttctagctactttccacagtttttt
tttttagttttttctctatttcatgtgcatgatgatatttgtcgcatgtt
agtcatgcgacggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_113608688_113609811
seq2: B6Ng01-095B18.b_43_1162 (reverse)

seq1  CGTGCTGAG-CTGGGTCAATTGACTGGAAAAAAAAAAAACAACAGAATTA  49
      ||||||||| |||| |||  ||||||| ||||||||||||| ||||  ||
seq2  CGTGCTGAGCCTGGTTCA--TGACTGGGAAAAAAAAAAACACCAGA--TA  46

seq1  GGG-GAGTAGAGACTGGGAGGCTCT-GCCCTCAATGTTTAGACCTACCCA  97
      ||| ||||||||||||||||||||| |||||| ||||||  | |||||||
seq2  GGGAGAGTAGAGACTGGGAGGCTCTGGCCCTC-ATGTTT--AACTACCCA  93

seq1  GCTGTAAAGTGTGCTCTGTGCTTACACAATGGCCTCCCCGACAGCCCAAG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAAAGTGTGCTCTGTGCTTACACAATGGCCTCCCCGACAGCCCAAG  143

seq1  CAGCGGCCACTCAAGCCCAGGGCCCACAAGGCTGCTCAGAGCGACATGGT  197
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGG-CACTCAAGCCCAGGGCCCACAAGGCTGCTCAGAGCGACATGGT  192

seq1  GACATCACGTGTCATGATGTCACGACATAGGCCATCCCTGAATGAGGTCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCACGTGTCATGATGTCACGACATAGGCCATCCCTGAATGAGGTCA  242

seq1  AA-CTTCTTCAGTTTTTCACACAGAACTCCTGGAGTTATGCATGTGACCA  296
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTCTTCAGTTTTTCACACAGAACTCCTGGAGTTATGCATGTGACCA  292

seq1  AGAGCCAGACTTGAGAGCAATGTCCCCTCTGTCTCAGGACTCTGCTGCTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAGACTTGAGAGCAATGTCCCCTCTGTCTCAGGACTCTGCTGCTC  342

seq1  CTCGGAGAGCGTCCCAGCATGGTGGCATCTACTCTTCTGTATCCCTGGGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGAGAGCGTCCCAGCATGGTGGCATCTACTCTTCTGTATCCCTGGGC  392

seq1  AAATACCACCTCTCTCTGACTGAGAACCCTTCAATCAGTAGTGTGACCTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCACCTCTCTCTGACTGAGAACCCTTCAATCAGTAGTGTGACCTT  442

seq1  TGTCAAGTGACCCTGTGCACAGTTCCCAGCTGGCAGTGGAATTAACAAGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGTGACCCTGTGCACAGTTCCCAGCTGGCAGTGGAATTAACAAGC  492

seq1  CTCCTCTCTCAGAGCCTTGGTTTTGTACAGCTCTGGAGAGCTTCAACCTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTCTCAGAGCCTTGGTTTTGTACAGCTCTGGAGAGCTTCAACCTT  542

seq1  CGCCTCCCTTGATGGCTGGCGACCTAGAATATTTCTGCAGTGATGGCCTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTCCCTTGATGGCTGGCGACCTAGAATATTTCTGCAGTGATGGCCTG  592

seq1  TCCATTGAGAAGCCATCTTGGTCTCCTCAGGCACGCCTGATAATGCTCAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGAGAAGCCATCTTGGTCTCCTCAGGCACGCCTGATAATGCTCAT  642

seq1  CTAGCACGCCAAAGCCTGCAGCCACGGGGCGGTGGCTAAGAGATGTGAGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCACGCCAAAGCCTGCAGCCACGGGGCGGTGGCTAAGAGATGTGAGA  692

seq1  GGCAGAAAGGATCCTGGTTAGAAGCCCAATCAGGAACTCTGCCTTCTCAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAAGGATCCTGGTTAGAAGCCCAATCAGGAACTCTGCCTTCTCAG  742

seq1  AGGCCTGGGATGGAGACTGAACCCTCAGCAAAGCACTGCTTTCTACTACC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGGGATGGAGACTGAACCCTCAGCAAAGCACTGCTTTCTACTACC  792

seq1  TTCCCACGGTCCTGCTCTGTGAGGCCCAGTGAGGCAGGTACTATGAGTAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACGGTCCTGCTCTGTGAGGCCCAGTGAGGCAGGTACTATGAGTAG  842

seq1  CAGCAAGTTGGAGAAGAGGCTGTGTCTGAGTGTAGGTCCGTGGTAGAGGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGTTGGAGAAGAGGCTGTGTCTGAGTGTAGGTCCGTGGTAGAGGA  892

seq1  TGGCTGGAGAGTCACAGCCACAGATGTCTTCTGAGTACCTGGTGGGGAGG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGAGAGTCACAGCCACAGATGTCTTCTGAGTACCTGGTGGGGAGG  942

seq1  TATCTTCTCTCTCTCTCTGCCCTTAAAGCAGGAATCTATCTGTCCCACAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCTCTCTCTCTCTGCCCTTAAAGCAGGAATCTATCTGTCCCACAA  992

seq1  AGCAGCCCCTACTTTGCTGCGGATCTGGGGTCCCTATGCCCCCCATCTCC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCCCTACTTTGCTGCGGATCTGGGGTCCCTATGCCCCCCATCTCC  1042

seq1  CTGAAGAGTCTGTTGGGCTCCTGTCCTGCTGCATAAATGCCTGCCTGCTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAGTCTGTTGGGCTCCTGTCCTGCTGCATAAATGCCTGCCTGCTC  1092

seq1  TTCACAGCTGTTCTCCACCTAAGAATTC  1124
      ||||||||||||||||||||||||||||
seq2  TTCACAGCTGTTCTCCACCTAAGAATTC  1120

seq1: chr12_113435689_113436772
seq2: B6Ng01-095B18.g_67_1131

seq1  GAATTCTTTTTTTTCTGGGGCAGTCCCAGGGACTAAGTAGGATTTTAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTTTCTGGGGCAGTCCCAGGGACTAAGTAGGATTTTAGTT  50

seq1  GTAAGAGGTGAGGCTGGAGCCAAAGCCAGCTGGTGGGCAGAGAGGGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGGTGAGGCTGGAGCCAAAGCCAGCTGGTGGGCAGAGAGGGAGGA  100

seq1  ATGAGGACACTCCATTCCTCTCTGCCTGGAGATCCAGAGCCTCTCCCGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGACACTCCATTCCTCTCTGCCTGGAGATCCAGAGCCTCTCCCGAG  150

seq1  CGACCTCCTCCTCTTCCCCCATCCTGATGCCAATCAACCCCGCCCTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCTCCTCCTCTTCCCCCATCCTGATGCCAATCAACCCCGCCCTTGCT  200

seq1  CTCACTGGCCACACTCACACCGTCTGCCCTCCACAGCTGCAGAGTTCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGGCCACACTCACACCGTCTGCCCTCCACAGCTGCAGAGTTCCCC  250

seq1  ATGGGAGGCAGAGCCAGAGTCTCTGAAGCTCCCCTAGCCACATGGGGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGGCAGAGCCAGAGTCTCTGAAGCTCCCCTAGCCACATGGGGCCT  300

seq1  TCATGCCTAGCACTACCAGCCTAGGGACAAAGGACTGTCTTCCCCAGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCTAGCACTACCAGCCTAGGGACAAAGGACTGTCTTCCCCAGCTC  350

seq1  ACCTTCGTTAAGATTTCTGTTGTTGTGATAAAACATTGGCAACATGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCGTTAAGATTTCTGTTGTTGTGATAAAACATTGGCAACATGGGAA  400

seq1  AGGAAGGGTTAATTTCTCCTCACACTGTCAGGCCACAGTCCCATAACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGTTAATTTCTCCTCACACTGTCAGGCCACAGTCCCATAACTGA  450

seq1  GGAAACTCAGGGCAGGAACCTGGAGGTAGGAGATGATCCAGGGCCATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTCAGGGCAGGAACCTGGAGGTAGGAGATGATCCAGGGCCATGGA  500

seq1  GGAATGCTGCTTACTGGTCACTGCCATTGGCAGGCTGACTCCGAAAGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCTGCTTACTGGTCACTGCCATTGGCAGGCTGACTCCGAAAGTTG  550

seq1  GTACTCTGTCCGTACTGAGTTGTCCTTTGATGAGTATCTGTGTCTCTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTGTCCGTACTGAGTTGTCCTTTGATGAGTATCTGTGTCTCTGTC  600

seq1  TTCTTCTCTCATGAGAATACAGACTAGGTGATGTCTGACCTAGGGTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCTCATGAGAATACAGACTAGGTGATGTCTGACCTAGGGTCTTT  650

seq1  GCTATCTCAGTCACTTCTTTAATGGACCCATCTTTTAATACACTTCCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCTCAGTCACTTCTTTAATGGACCCATCTTTTAATACACTTCCATG  700

seq1  CTGAGGTCCTGGGGACAGGGTATCAACATGGGAAGTCTGGGAGGGATTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTCCTGGGGACAGGGTATCAACATGGGAAGTCTGGGAGGGATTGC  750

seq1  CCTTAGACCAGAACACCCTTAATCATCATCTGTCCCCCT-GGCTGGCACT  799
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCTTAGACCAGAACACCCTTAATCATCATCTGTCCCCCTGGGCTGGCACT  800

seq1  TAGTGCTGTGGTCCAGCTGGCCTCTACTCTACAGACTCTGAGAATCACCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCTGTGGTCCAGCTGGCCTCTACTCTACAGACTCTGAGAATCACCT  850

seq1  CCCAGCCCACCACCACCCGGCCTGTGCATCCTGCTCTCTCAGAGCCTCTG  899
      ||||||||||   |||||||| ||||||| ||||||||||||||||||||
seq2  CCCAGCCCAC--ACACCCGGCTTGTGCATTCTGCTCTCTCAGAGCCTCTG  898

seq1  CAGAAGCGTGTGATGAACCCAGAATATCATTAGAATCACTGGACCATCTG  949
      |||||||||||||||||||||||||||||||||| |||||||| ||||| 
seq2  CAGAAGCGTGTGATGAACCCAGAATATCATTAGATTCACTGGA-CATCT-  946

seq1  GCTTCCTCAAGAGGCCAGTTGTTAGAACCCAG-TCTAAGGCTACTTTCCC  998
      |||| ||| |||||||||||| |||||||||| ||||  |||||||| ||
seq2  GCTT-CTC-AGAGGCCAGTTG-TAGAACCCAGTTCTA--GCTACTTT-CC  990

seq1  ACAGTTTTTTTTTTTAAGTTTTTTTTCCTTCTAAATTTCATGTGCATTGA  1048
      ||||||||||||||| ||||||      ||||  |||||||||||| |||
seq2  ACAGTTTTTTTTTTT-AGTTTT------TTCTCTATTTCATGTGCA-TGA  1032

seq1  TTGATATTTGTCTGCATGTATGTCTATGCGACGGTT  1084
       ||||||||||| ||||||  ||| |||||||||||
seq2  -TGATATTTGTC-GCATGTTAGTC-ATGCGACGGTT  1065