BAC Information

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BAC

Clone NameB6Ng01-095L04
Chromosome12 (Build37)
Map Location 102,242,852 - 102,244,011
singlet/doubletsinglet
Overlap gene0610010D24Rik
Upstream geneKcnk13, Psmc1, BC002230, Calm1, Ttc7b, Rps6ka5, LOC100040123, 9030617O03Rik, EG667148, Gpr68
Downstream geneLOC100040184, Smek1, 4930463M05Rik, Mylf-ps, 4932415G16Rik, Mtac2d1, Fbln5, Trip11, Atxn3, LOC100040305, LOC100040297, Cpsf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095L04.bB6Ng01-095L04.g
ACCDH906566DH906567
length1,1601,142
definitionDH906566|Mus musculus domesticus DNA, BAC clone: B6Ng01-095L04, 5' end.DH906567|Mus musculus domesticus DNA, BAC clone: B6Ng01-095L04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaagtacccaagagctaagggatcttcaaccctata
ggtgaacaacattatgactaccagtaccctgagctctgacctctagctgc
atatgtatcaaagatgctagtcgcatcactggtagagaggccatgaaccg
cagactttgtgtgccggtaagggacgtcagggccaaggggggggagagat
gggttagaag
gaattctccatcttcctgcagcccaagtgctagggttacaagcttatctt
tccacactctgctcctactgcatggatagttcattctgtcctgagaacga
actattccctacagcacatctccacctctaagagaagtcaccacaggaat
tttatttcagaagccaaatggtgcagagaaaaatgaagggcagagttctg
aaatcgatgcagatattcaggccatacaagatggtgcaggcctttcttta
gtcccagcacttgggaggcagatagacctctgtgagttccaggtcagcca
ggacatcacagtgagactctgactctcacacacacacacacacacacaca
cacacacacacacacacacactccctccctccctccctccccccccccac
ccctctctgggtatggcccagggcaagcctctccacactccagggcctca
tttctcatcagtgagaaatgaggacaatacccaagccatctgcttcataa
tttttaatgggctcttcgatgactggccttactctctttgtttctcgtat
gacaaagctataattaaaaagctaatccatgtctgaaccaatgaggcagc
atgtacaaccacaggcatgcgtgtgtgcccgcgcatacacacacacacac
acacacacacacacacacacacacaactttgaggtacacacagctcaatc
atcatactgttctgtggccatgctctagaggcctctttctaagggccaat
ctctttttctctgtctctgctgtgtgtgcgtgttactcttctgttgctgt
gctaagacaccatgtcaacacagctctcagagtgatacgagtctatcaag
gtcagcaggcagcaggcagcagcagcatgccagcaggcagcaagttgtaa
ttggctgcagcaagcagctaggggctcttcatatagtgagcccacaacca
cggagcagagagagccaactagaaattggcctgagtctaagttttcaaag
cctgaccccagtgacttcttcaagaagaaatgcttctaaactttcccaac
agcacatcaggggcacagcacaatttctatctaaactatgggtgaactat
cactcaacttccaagttgtttgttactaacattcgactttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_102242852_102244011
seq2: B6Ng01-095L04.g_68_1209

seq1  GAATTCTCCATCTTCCTGCAGCCCAAGTGCTAGGGTTACAAGCTTATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATCTTCCTGCAGCCCAAGTGCTAGGGTTACAAGCTTATCTT  50

seq1  TCCACACTCTGCTCCTACTGCATGGATAGTTCATTCTGTCCTGAGAACGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACTCTGCTCCTACTGCATGGATAGTTCATTCTGTCCTGAGAACGA  100

seq1  ACTATTCCCTACAGCACATCTCCACCTCTAAGAGAAGTCACCACAGGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTCCCTACAGCACATCTCCACCTCTAAGAGAAGTCACCACAGGAAT  150

seq1  TTTATTTCAGAAGCCAAATGGTGCAGAGAAAAATGAAGGGCAGAGTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCAGAAGCCAAATGGTGCAGAGAAAAATGAAGGGCAGAGTTCTG  200

seq1  AAATCGATGCAGATATTCAGGCCATACAAGATGGTGCAGGCCTTTCTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCGATGCAGATATTCAGGCCATACAAGATGGTGCAGGCCTTTCTTTA  250

seq1  GTCCCAGCACTTGGGAGGCAGATAGACCTCTGTGAGTTCCAGGTCAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGCACTTGGGAGGCAGATAGACCTCTGTGAGTTCCAGGTCAGCCA  300

seq1  GGACATCACAGTGAGACTCTGACTCTCACACACACACACACACACACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCACAGTGAGACTCTGACTCTCACACACACACACACACACACACA  350

seq1  CACACACACACACACACACACTCCCTCCCTCCCTCCCTCCCCCCCCCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACTCCCTCCCTCCCTCCCTCCCCCCCCCCAC  400

seq1  CCCTCTCTGGGTATGGCCCAGGGCAAGCCTCTCCACACTCCAGGGCCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCTGGGTATGGCCCAGGGCAAGCCTCTCCACACTCCAGGGCCTCA  450

seq1  TTTCTCATCAGTGAGAAATGAGGACAATACCCAAGCCATCTGCTTCATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATCAGTGAGAAATGAGGACAATACCCAAGCCATCTGCTTCATAA  500

seq1  TTTTTAATGGGCTCTTCGATGACTGGCCTTACTCTCTTTGTTTCTCGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATGGGCTCTTCGATGACTGGCCTTACTCTCTTTGTTTCTCGTAT  550

seq1  GACAAAGCTATAATTAAAAAGCTAATCCATGTCTGAACCAATGAGGCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGCTATAATTAAAAAGCTAATCCATGTCTGAACCAATGAGGCAGC  600

seq1  ATGTACAACCACAGGCATGCGTGTGTGCCCGCGCATACACACACACACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAACCACAGGCATGCGTGTGTGCCCGCGCATACACACACACACAC  650

seq1  ACACACACACACACACACACACACAACTTTGAGGTACACACAGCTCAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACAACTTTGAGGTACACACAGCTCAATC  700

seq1  ATCATACTGTTCTGTGGCCATGCTCTAGAGGCCTCTTTCTAAGGGCCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACTGTTCTGTGGCCATGCTCTAGAGGCCTCTTTCTAAGGGCCAAT  750

seq1  CTCTTTTTCTCTGTCTCTGCTGTGTGTGCGTGTTACTCTTCTGTTGCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTTCTCTGTCTCTGCTGTGTGTGCGTGTTACTCTTCTGTTGCTGT  800

seq1  GCTAAGACACCATGTCCAACACAGCTCTCAGAGTGATACGAGTCTATCAA  850
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCTAAGACACCATGT-CAACACAGCTCTCAGAGTGATACGAGTCTATCAA  849

seq1  GGTCAGCAGGCAGCAGGCAGCAGGCAGCATGGCAGCAGGCAGCAAG-TGT  899
      |||||||||||||||||||||| |||||||| |||||||||||||| |||
seq2  GGTCAGCAGGCAGCAGGCAGCA-GCAGCATGCCAGCAGGCAGCAAGTTGT  898

seq1  -ATTGGCTGCAGCAGGCAGCTAGGGGCTC-TCATATAGTGAG-CCACAAA  946
       ||||||||||||| |||||||||||||| |||||||||||| |||||| 
seq2  AATTGGCTGCAGCAAGCAGCTAGGGGCTCTTCATATAGTGAGCCCACAAC  948

seq1  CACGGAGCAGAGAGAGCCAACTAGAAA-TGGCCTGAGTCTAAGTTTTCAA  995
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CACGGAGCAGAGAGAGCCAACTAGAAATTGGCCTGAGTCTAAGTTTTCAA  998

seq1  AGCCTGACCCCAGTGACTTCCTCCAGGAAGGACATGCCTCCTAAACCTTC  1045
      |||||||||||||||||||| || ||  | || ||| || |||||| |||
seq2  AGCCTGACCCCAGTGACTTCTTCAAG--AAGAAATG-CTTCTAAACTTTC  1045

seq1  CCAAACAGCACCATCAACCGGGCACCAGGCACCAAATGTCTATCTAAAAC  1095
      || ||||||| |||||   ||||||   ||||  ||| ||||||| ||||
seq2  CC-AACAGCA-CATCA--GGGGCAC--AGCAC--AATTTCTATCT-AAAC  1086

seq1  TATGTGTGACATTTATCACTCAAACCTCCACAGTTGTTTTGTTACTAACA  1145
      |||| |||  |  |||||||| ||| |||| ||||| |||||||||||||
seq2  TATGGGTG--AACTATCACTC-AACTTCCA-AGTTG-TTTGTTACTAACA  1131

seq1  CATTTCGGACTTTCC  1160
         ||| ||||||||
seq2  ---TTC-GACTTTCC  1142