BAC Information

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BAC

Clone NameB6Ng01-095L19
Chromosome2 (Build37)12 (Build37)
Map Location 101,344,080 - 101,344,38610,947,902 - 10,948,039
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668705
Downstream geneB230118H07Rik, Rag2, Rag1, LOC100042930, Traf6, 2600010E01Rik, LOC100043302, Commd9, Ldlrad3, LOC674202, Trim44, Fjx1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095L19.bB6Ng01-095L19.g
ACCDH906596DH906597
length1,143138
definitionDH906596|Mus musculus domesticus DNA, BAC clone: B6Ng01-095L19, 5' end.DH906597|Mus musculus domesticus DNA, BAC clone: B6Ng01-095L19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(101,344,080 - 101,344,386)(10,947,902 - 10,948,039)
sequence
gaattctttgttcagttctgagccccatattttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagtacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgttaagttccttga
tccacttagatttgatcttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggtacttt
tatccttgagaagagcttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagttttatcatac
agatctttcacttccttagttagagtcacgccagatattttatattattt
gtgactattgagaggtgtgtttccctaattcttctcagctgttattcttt
gtatagagaaaggcatgacttgttggttatttatattcagctacttcccc
gaagctgtttatcaggttagaagtctctggtgggaatttaagtcacttat
ttacatcaatctatcgcaagaattgactctccttcatgtatct
actgcagattaaattaaaatcatagaaatttctgaaaagtattcagaatg
ctttaaatcatgcattaatgtctttgttatcagaagtttatctttggaga
ggaagggaatgatgatgtggagggggccgggaggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_101344080_101344386
seq2: B6Ng01-095L19.b_680_1195

seq1  GGTGATTCCACCAGAGGTTCTTTTATCCTTGAGAAGACTTTTTGCTATCC  50
      |||||||||||||||||| ||||||||||||||||||  |||||||||||
seq2  GGTGATTCCACCAGAGGTACTTTTATCCTTGAGAAGAGCTTTTGCTATCC  50

seq1  TAGGTTTTTTGTTATTCCAGATGAATTTGCAAATTGCTCCTTCTAATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TAGGTTTTTTGTTATTCCAGATGAATTTGCAAATTGCTCCTTCTAATTCG  100

seq1  TTGAAGAATTGAGTTGGAATTTTGATGGGGATTGCATTGAATCTGTAGA-  149
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTGAAGAATTGAGTTGGAATTTTGATGGGGATTGCATTGAATCTGTAGAT  150

seq1  ---TCTGAGCAGG-------GTTTTCTAAT-----CCCTGTAATTTTGTT  184
         | |  ||| |        ||||  |||      ||||  | |   | 
seq2  TGCTTTTGGCAAGATAGCCATTTTTACAATGTTGATCCTGCCAATCCATG  200

seq1  AG------------TT--GTCTCCTG-GCTAGTC----AATTGTTTTTTC  215
      ||            ||   ||| ||| | |  ||    | || ||| |||
seq2  AGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTCTTTCTTC  250

seq1  ----ACTT----TTTTCTC-------TCTCTCCCATTCAT-GTTAGGG--  247
          | ||    |||| ||       ||| || | | | | ||||| |  
seq2  AGAGATTTGAAGTTTTATCATACAGATCTTTCACTTCCTTAGTTAGAGTC  300

seq1  ------GATTTCTGAT----TTCCTGA-AATTTACATGATTAATGCTTTC  286
            ||| | | ||    ||  |||  ||| |   ||    || || |
seq2  ACGCCAGATATTTTATATTATTTGTGACTATTGA---GAGGTGTGTTTCC  347

seq1  CTAACTCTCCTTCA--TGTATCT---------------------------  307
      |||| ||| | |||  ||| | |                           
seq2  CTAATTCTTC-TCAGCTGT-TATTCTTTGTATAGAGAAAGGCATGACTTG  395

seq1  --------------------------------------------------  307
                                                        
seq2  TTGGTTATTTATATTCAGCTACTTCCCCGAAGCTGTTTATCAGGTTAGAA  445

seq1  --------------------------------------------------  307
                                                        
seq2  GTCTCTGGTGGGAATTTAAGTCACTTATTTACATCAATCTATCGCAAGAA  495

seq1  ---------------------  307
                           
seq2  TTGACTCTCCTTCATGTATCT  516

seq1: chr12_10947902_10948039
seq2: B6Ng01-095L19.g_74_211

seq1  ACTGCAGATTAAATTAAAATCATAGAAATTTCTGAAAAGTATTCAGAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGATTAAATTAAAATCATAGAAATTTCTGAAAAGTATTCAGAATG  50

seq1  CTTTAAATCATGCATTAATGTCTTTGTTATCAGAAGTTTATCTTTGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAATCATGCATTAATGTCTTTGTTATCAGAAGTTTATCTTTGGAGA  100

seq1  GGAAGGGAATGATGATGTGGAGGGGGCCGGGAGGGGGA  138
      ||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGAATGATGATGTGGAGGGGGCCGGGAGGGGGA  138