MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-096E05
Chromosome	12 (Build37)
Map Location	110,214,419 - 110,215,574
singlet/doublet	singlet
Overlap gene	Wdr25
Upstream gene	Bcl11b, Setd3, Ccnk, EG668158, 1600002O04Rik, Cyp46a1, Eml1, Evl, Degs2, LOC668164, Yy1, Slc25a29, AI132487, Wars
Downstream gene	BM948371, LOC668194, Dlk1, Gtl2, Rtl1, 6430411K18Rik, B830012L14Rik, LOC100040715, LOC100040724, LOC675987, LOC100041509, LOC100040746
Link	Open Mouse BAC browser

Click to get alignment info.

name	Bcl11b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58208 MGI:1929913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Setd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52690 MGI:1289184
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccnk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12454 MGI:1276106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668158 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668158 MGI:3644008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins

name	1600002O04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214305 MGI:1919265
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp46a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13116 MGI:1341877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eml1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68519 MGI:1915769
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Evl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14026 MGI:1194884
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Degs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70059 MGI:1917309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668164 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668164
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 512 ESTs, 3 Proteins pseudo : _no_value

name	Yy1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22632 MGI:99150
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc25a29 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214663 MGI:2444911
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI132487 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104910 MGI:2144766
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wars (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22375 MGI:104630
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdr25 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212198 MGI:3045255
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 ESTs, 2 Proteins

name	BM948371 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380785 MGI:3044626
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 4 Proteins

name	LOC668194 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668194
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Dlk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13386 MGI:94900
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17263 MGI:1202886
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 87 ESTs

name	Rtl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:353326 MGI:2656842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6430411K18Rik (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:76880
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B830012L14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320085 MGI:2443332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040715 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040715
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040724 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	LOC675987 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675987
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100041509 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041509
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 467 ESTs, 10 Proteins pseudo : _no_value

name	LOC100040746 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040746
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Bcl11b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120586998 GeneID:58208 MGI:1929913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : B-cell leukemia/lymphoma 11B transcript_id : NM_021399.2

name	Bcl11b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120587006 GeneID:58208 MGI:1929913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : B-cell leukemia/lymphoma 11B transcript_id : NM_001079883.1

name	Setd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802818 GeneID:52690 MGI:1289184
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET domain containing 3 transcript_id : NM_028262.2

name	Ccnk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39930320 GeneID:12454 MGI:1276106
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin K transcript_id : NM_009832.1

name	EG668158 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263541 GeneID:668158 MGI:3644008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins product : predicted gene, EG668158 transcript_id : XM_994648.2

name	1600002O04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249063 GeneID:214305 MGI:1919265
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1600002O04 gene transcript_id : NM_001044380.1

name	Cyp46a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753589 GeneID:13116 MGI:1341877
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 46, subfamily a, polypeptide 1 transcript_id : NM_010010.1

name	Eml1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112807170 GeneID:68519 MGI:1915769
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : echinoderm microtubule associated protein like 1 transcript_id : NM_001043336.1

name	Eml1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112807167 GeneID:68519 MGI:1915769
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : echinoderm microtubule associated protein like 1 transcript_id : NM_001043335.1

name	Evl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254643 GeneID:14026 MGI:1194884
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ena-vasodilator stimulated phosphoprotein transcript_id : NM_007965.2

name	Degs2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345826 GeneID:70059 MGI:1917309
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : degenerative spermatocyte homolog 2 (Drosophila), lipid desaturase transcript_id : NM_027299.3

name	Yy1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130338 GeneID:22632 MGI:99150
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : YY1 transcription factor transcript_id : NM_009537.3

name	Slc25a29 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370761 GeneID:214663 MGI:2444911
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29 transcript_id : NM_181328.3

name	AI132487 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60097913 GeneID:104910 MGI:2144766
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI132487 transcript_id : NM_001012310.1

name	Wars (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328205 GeneID:22375 MGI:104630
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tryptophanyl-tRNA synthetase transcript_id : NM_011710.2

name	Wdr25 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263513 GeneID:212198 MGI:3045255
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 ESTs, 2 Proteins product : WD repeat domain 25 transcript_id : XM_001474974.1

name	BM948371 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263515 GeneID:380785 MGI:3044626
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 4 Proteins product : expressed sequence BM948371, transcript variant 1 transcript_id : XM_354696.6

name	Dlk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802319 GeneID:13386 MGI:94900
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : delta-like 1 homolog (Drosophila) transcript_id : NM_010052.3

name	Rtl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46309584 GeneID:353326 MGI:2656842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retrotransposon-like 1 transcript_id : NM_184109.1

name	B830012L14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263544 GeneID:320085 MGI:2443332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA B830012L14 gene transcript_id : XM_001476751.1

name	LOC100040715 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263518 GeneID:100040715
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040715 transcript_id : XM_001475122.1

name	LOC100040724 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263520 GeneID:100040724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : hypothetical protein LOC100040724 transcript_id : XM_001475138.1

name	Bcl11b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120586999 GeneID:58208 MGI:1929913
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; B-cell lymphoma/leukaemia 11B; COUP-TF interacting protein 2 product : B-cell leukemia/lymphoma 11B isoform b protein_id : NP_067374.2

name	Bcl11b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120587007 GeneID:58208 MGI:1929913
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; B-cell lymphoma/leukaemia 11B; COUP-TF interacting protein 2 product : B-cell leukemia/lymphoma 11B isoform a protein_id : NP_001073352.1

name	Setd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312266 CCDS:CCDS26159.1 GeneID:52690 MGI:1289184
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : SET domain containing 3 protein_id : NP_082538.1

name	Ccnk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930321 GeneID:12454 MGI:1276106
definition	GO_function : GO:0016538 - cyclin-dependent protein kinase regulator activity [Evidence IEA]; GO:0019901 - protein kinase binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0000079 - regulation of cyclin-dependent protein kinase activity [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : cyclin K protein_id : NP_033962.1

name	EG668158 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94393134 GeneID:668158 MGI:3644008
definition	codon_start : 1 product : similar to MGC114619 protein protein_id : XP_999742.1

name	1600002O04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249064 GeneID:214305 MGI:1919265
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005044 - scavenger receptor activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC214305 protein_id : NP_001037845.1

name	Cyp46a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753590 CCDS:CCDS26160.1 GeneID:13116 MGI:1341877
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008203 - cholesterol metabolism [Evidence IEA]; GO:0006118 - electron transport [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA] codon_start : 1 note : cytochrome P450, 46 (cholesterol 24-hydroxylase); cholestrol 24-hydroxylase; cytochrome P450, 46a1 (cholesterol 24-hydroxylase) product : cytochrome P450, family 46, subfamily a, polypeptide 1 protein_id : NP_034140.1

name	Eml1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112807168 GeneID:68519 MGI:1915769
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003993 - acid phosphatase activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : echinoderm microtubule associated protein like 1 isoform 1 protein_id : NP_001036800.1

name	Eml1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112807171 GeneID:68519 MGI:1915769
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003993 - acid phosphatase activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : echinoderm microtubule associated protein like 1 isoform 2 protein_id : NP_001036801.1

name	Evl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254644 CCDS:CCDS26161.1 GeneID:14026 MGI:1194884
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005925 - focal adhesion [Evidence IDA]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005522 - profilin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0017124 - SH3 domain binding [Evidence IDA] GO_process : GO:0030048 - actin filament-based movement [Evidence NAS]; GO:0045010 - actin nucleation [Evidence NAS]; GO:0008154 - actin polymerization and/or depolymerization [Evidence IDA]; GO:0007411 - axon guidance [Evidence NAS]; GO:0051016 - barbed-end actin filament capping [Evidence NAS]; GO:0007166 - cell surface receptor linked signal transduction [Evidence ISS]; GO:0007399 - nervous system development [Evidence ISS]; GO:0009887 - organ morphogenesis [Evidence ISS]; GO:0030168 - platelet activation [Evidence NAS] codon_start : 1 exception : mismatches in translation product : Ena-vasodilator stimulated phosphoprotein protein_id : NP_031991.2

name	Degs2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754029 CCDS:CCDS26162.1 GeneID:70059 MGI:1917309
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [Evidence IEA]; GO:0000170 - sphingosine hydroxylase activity [Evidence IDA] GO_process : GO:0006636 - fatty acid desaturation [Evidence IEA] codon_start : 1 product : sphingolipid delta 4 desaturase/C-4 hydroxylase protein_id : NP_081575.2

name	Yy1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982421 CCDS:CCDS26163.1 GeneID:22632 MGI:99150
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0031519 - PcG protein complex [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IMP] [Evidence IGI]; GO:0048595 - eye morphogenesis (sensu Mammalia) [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : UCRBP transcription factor; delta transcription factor; Yin Yang 1 product : YY1 transcription factor protein_id : NP_033563.2

name	Slc25a29 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044469 CCDS:CCDS26164.1 GeneID:214663 MGI:2444911
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0015227 - acyl carnitine transporter activity [Evidence IDA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006844 - acyl carnitine transport [Evidence IDA] codon_start : 1 product : solute carrier family 25, member 29 protein_id : NP_851845.1

name	AI132487 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60097914 CCDS:CCDS26165.1 GeneID:104910 MGI:2144766
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : mitochondrial hepatocellular carcinoma-downregulated carrier protein protein_id : NP_001012310.1

name	Wars (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328206 CCDS:CCDS26166.1 GeneID:22375 MGI:104630
definition	GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]; GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : tryptophanyl-tRNA synthetase protein_id : NP_035840.2

name	Wdr25 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263514 GeneID:212198 MGI:3045255
definition	codon_start : 1 product : WD repeat domain 25 protein_id : XP_001475024.1

name	BM948371 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263516 GeneID:380785 MGI:3044626
definition	codon_start : 1 product : similar to Brain-enriched guanylate kinase-associated protein isoform 1 protein_id : XP_354696.6

name	Dlk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83816918 CCDS:CCDS26168.1 GeneID:13386 MGI:94900
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : delta-like 1 homolog protein_id : NP_034182.2

name	Rtl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46309585 CCDS:CCDS26170.1 GeneID:353326 MGI:2656842
definition	codon_start : 1 product : retrotransposon-like 1 protein_id : NP_908998.1

name	B830012L14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263545 GeneID:320085 MGI:2443332
definition	codon_start : 1 product : hypothetical protein LOC320085 protein_id : XP_001476801.1

name	LOC100040715 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263519 GeneID:100040715
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475172.1

name	LOC100040724 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263521 GeneID:100040724
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475188.1

name	LOC668194 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668194
definition	number : 1 pseudo : _no_value

name	LOC668194 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668194
definition	number : 2 pseudo : _no_value

name	LOC675987 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675987
definition	number : 1 pseudo : _no_value

name	LOC675987 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675987
definition	number : 2 pseudo : _no_value

name	LOC675987 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675987
definition	number : 3 pseudo : _no_value

name	LOC100040746 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040746
definition	number : 1 pseudo : _no_value

name	LOC100040746 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040746
definition	number : 2 pseudo : _no_value

name	LOC668164 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263542 GeneID:668164
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 512 ESTs, 3 Proteins product : similar to H3 histone, family 3A pseudo : _no_value transcript_id : XR_032875.1

name	Gtl2 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149263543 GeneID:17263 MGI:1202886
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 87 ESTs product : GTL2, imprinted maternally expressed untranslated mRNA transcript_id : XR_035483.1

name	6430411K18Rik (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:84872140 GeneID:76880
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6430411K18 gene transcript_id : NR_002848.1

name	LOC100041509 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263546 GeneID:100041509
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 467 ESTs, 10 Proteins product : similar to QM protein pseudo : _no_value transcript_id : XR_032910.1

clone name	MSMg01-378B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160M13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-321C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388L10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-104F07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-308I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441D03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-434P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491J05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-532C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244L20
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-096E05.b	B6Ng01-096E05.g
ACC	DH906973	DH906974
length	1,140	431
definition	DH906973\|Mus musculus domesticus DNA, BAC clone: B6Ng01-096E05, 5' end.	DH906974\|Mus musculus domesticus DNA, BAC clone: B6Ng01-096E05, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcaaggccagtgtagaaagtggattacgtttctatgtgttagagtt gaacagtccagaatttaaaaaaatgcatctgcactagcccctaaactcat caggagtccatttgacaaagatgtgtctgagcttcacagccatgcttcac ataagatgcccaggacctggattccctactgtgccttaccagtgtgctac gcagccagcttggtttatttccatctcagtctgtgatgaaagcaggcctg agctttgaaacaccccaggaaaggttcctccggctcctgtgcacaaatgg gctgctcatgtccccttggcaaaggaaggcacgaactgtgtggactccta gggagctgtgagttagggagtggtctggcagagtgttttttggagcagca ggagctggtgagtcaaaagctactgccactggatctcaaagccagcacag ccacccccagaaatgtgacagtcagttgtccctaggtgtggacatagggg agactcttatttgattttctttttctgtctttgaaaaatatattttgttg gactgtgcttatttcccatgtaacccgagaaacaaccataccatagtaat acctaccccgcgtgccacacacacgctttagagtttgagttctttgtaag gagagtgtatttctctcaaaacaagcagcagggcctataggctggctcag tgggtaatggtgcttgctgcacaaacctagccactgagtttgatctctgg aaccattggtgggctgagagaactgtctgtcagagttgtcctctgacctc tacacatttcctatgacatgcatatgtcccctttcaataacttaaataaa atgcaaacaaaacccaaaccaaaaggcatcaagaacattgcctgaggccg aagcaatagctgggccgtcctcagagaccccagacagctgcagtggcagt ggcagtactggtcgtgaaacagacactcactctactgtgtttttccgtca tgttcttgtagatgtgtgctttgttgaaaccaaacgtgctaataattgta gtatacatggagtcatcttcagacagtctacagaaactgggttcttaatc ttgtgaaagcagcttgggatcttcaattacttgctgaaaa	tgtcttcttctggacaggacatggccgtgagttaaggagctcacatcagc tgtgattaactacctaaggcccacccacccaagatcaggacagtcacaat tccagcatggatgagtggggggctccaaaggtctcatcgctggctcatgg gctgtcggcagttgatggctgctaggggagagacagtcattggggacaga gtgaccactagtgggttgtttacaccctaataatgaccgcacaaccatac acatttgggcagcactaattggaatcagtgggttattttcaagggaaaga cgaagttggaagggagatgtgttaggagtcagggattatttggtgggagg gaatatgatctaaataccctgctcctttattattttttcatagggcaaat gcatccattaattacaattatcacggctgtt
quality values	Open. Hide. 61 42 23 30 61 31 19 43 61 61 53 43 38 61 47 47 61 55 61 61 61 55 32 37 61 61 36 36 28 23 38 25 42 52 61 61 59 59 61 59 59 59 61 61 59 59 61 59 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 61 59 59 61 61 59 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 49 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 59 59 59 59 61 61 61 52 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 55 61 61 61 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 53 53 61 61 53 61 61 61 61 53 61 47 61 61 61 61 61 61 61 61 61 61 43 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 42 47 61 61 61 61 35 61 61 61 61 61 61 61 53 43 61 61 53 61 61 52 61 61 52 47 61 53 61 61 61 61 53 61 61 61 50 50 61 53 57 43 57 53 57 53 53 53 57 42 53 52 53 53 53 53 57 53 57 53 57 57 57 53 57 57 57 57 45 57 45 53 53 53 47 53 38 57 53 57 57 57 52 50 39 57 45 53 47 47 53 53 45 53 53 53 53 57 57 53 30 47 47 50 57 53 40 57 45 43 53 45 45 43 57 57 50 53 53 53 50 37 24 47 47 52 53 57 52 52 53 45 53 47 13 41 47 38 57 45 53 53 53 33 47 38 47 57 41 30 53 45 42 45 52 47 43 47 31 50 50 30 57 34 27 38 30 53 52 47 37 52 35 37 33 43 24 57 45 52 52 38 37 37 50 57 27 50 35 53 52 33 35 57 52 39 33 25 36 50 53 38 57 32 30 42 36 52 30 37 47 57 44 40 57 51 37 27 42 37 52 20 52 29 38 33 19 32 50 24 44 42 52 28 40 42 25 52 21 43 35 29 24 37 53 36 42 33 27 36 17 41 37 37 30 31 37 24 37 22 20 53 52 33 42 30 36 29 26 37 29 25 32 29 19 24 36 32 29 37 31 37 57 57 53 28 57 41 37 19 28 34 30 33 32 28 33 24 57 33 29 31 57 53 28 23 30 17 17 46 27 30 27 46 45 29 22 47 30 14 13 31 24 30 24 45 41 31 16 25 8 17 29 28 23 29 18 36 19 27 21 37 36 36 18 28 28 29 27 15 27 28 24 13 30 19 10 27 20 29 30 13 7 10 29 34 43 29 9 18 18 10 41 8 11 19 14 8 31 10 29 15 29 33 29 9 8 36 12 28 26 30 26 18 23 13 17 14 14 29 8 14 13 21 24 30 11 23 17 25 22 10 10 16 19 12 13 13 5 7 10 16 6 16 11 5 17 10 8 21 10 15 12 7 13 25 20 16 24 19 24 5 7 12 30 51 46 9 9 17 8 9 24 11 12 16 7 18 20 16 14 12 7 7 5 15 5 6 9 12 6 7 5 8 38 22 51 31 9 28 11 5 5 5 9 5 5 7 25 6 10 7 16 12 14 18 11 32 7 10 7 15 6 11 5 4 6 7 11 8 15 23 25 9 5 12 7 6 5 9 14 6 7 16 7 5 30 6 11 13 19 7 6 10 4 3 4 6 6 5 5 6 20 15 10 6 4 7 5 16 20 15 9 11 6 9 7 6 9 13 21 8 17 10 17 5 3 11 7 14 10 9 28 8 10 12 7 5 11 11 24 8 12 9 14 15 4 3 4 11 26 32 30 11	Open. Hide. 61 28 18 32 18 23 26 26 24 18 41 59 59 59 59 59 59 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 49 49 36 23 49 50 43 49 52 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 59 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 47 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 50 50 61 61 61 52 61 61 43 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 47 61 50 61 61 52 61 61 61 53 61 61 42 40 61 61 61 61 61 61 61 53 61 61 53 47 36 42 19 30 28 24 20 22 27 23 35 16 10 10 8 19 16 15 22 6 14 16 10 12 10 12 18 21 13 14 9 5 4 12 14 7 24 21 21 19 10 10 16 20 21 31 31 17 24 17 20 14 21 16 16 11 17 12 12 10 9 16 8 26 11 12 10 17 30 18 10 14 17 9 8 11 7 13 10 7 11 8 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_110214419_110215574
seq2: B6Ng01-096E05.b_44_1183

seq1  GAATTCAAGGCCAGTGTAGAAAGTGGATTACGTTTCTATGTGTTAGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCAGTGTAGAAAGTGGATTACGTTTCTATGTGTTAGAGTT  50

seq1  GAACAGTCCAGAATTTAAAAAAATGCATCTGCACTAGCCCCTAAACTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTCCAGAATTTAAAAAAATGCATCTGCACTAGCCCCTAAACTCAT  100

seq1  CAGGAGTCCATTTGACAAAGATGTGTCTGAGCTTCACAGCCATGCTTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTCCATTTGACAAAGATGTGTCTGAGCTTCACAGCCATGCTTCAC  150

seq1  ATAAGATGCCCAGGACCTGGATTCCCTACTGTGCCTTACCAGTGTGCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATGCCCAGGACCTGGATTCCCTACTGTGCCTTACCAGTGTGCTAC  200

seq1  GCAGCCAGCTTGGTTTATTTCCATCTCAGTCTGTGATGAAAGCAGGCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCAGCTTGGTTTATTTCCATCTCAGTCTGTGATGAAAGCAGGCCTG  250

seq1  AGCTTTGAAACACCCCAGGAAAGGTTCCTCCGGCTCCTGTGCACAAATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGAAACACCCCAGGAAAGGTTCCTCCGGCTCCTGTGCACAAATGG  300

seq1  GCTGCTCATGTCCCCTTGGCAAAGGAAGGCACGAACTGTGTGGACTCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCATGTCCCCTTGGCAAAGGAAGGCACGAACTGTGTGGACTCCTA  350

seq1  GGGAGCTGTGAGTTAGGGAGTGGTCTGGCAGAGTGTTTTTTGGAGCAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCTGTGAGTTAGGGAGTGGTCTGGCAGAGTGTTTTTTGGAGCAGCA  400

seq1  GGAGCTGGTGAGTCAAAAGCTACTGCCACTGGATCTCAAAGCCAGCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGGTGAGTCAAAAGCTACTGCCACTGGATCTCAAAGCCAGCACAG  450

seq1  CCACCCCCAGAAATGTGACAGTCAGTTGTCCCTAGGTGTGGACATAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCCAGAAATGTGACAGTCAGTTGTCCCTAGGTGTGGACATAGGGG  500

seq1  AGACTCTTATTTGATTTTCTTTTTCTGTCTTTGAAAAATATATTTTGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTTATTTGATTTTCTTTTTCTGTCTTTGAAAAATATATTTTGTTG  550

seq1  GACTGTGCTTATTTCCCATGTAACCCGAGAAACAACCATACCATAGTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGCTTATTTCCCATGTAACCCGAGAAACAACCATACCATAGTAAT  600

seq1  ACCTACCCCGCGTGCCACACACACGCTTTAGAGTTTGAGTTCTTTGTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACCCCGCGTGCCACACACACGCTTTAGAGTTTGAGTTCTTTGTAAG  650

seq1  GAGAGTGTATTTCTCTCAAAACAAGCAGCAGGGCCTATAGGCTGGCTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGTATTTCTCTCAAAACAAGCAGCAGGGCCTATAGGCTGGCTCAG  700

seq1  TGGGTAATGGTGCTTGCTGCACAAACCTAGCCACTGAGTTTGATCTCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAATGGTGCTTGCTGCACAAACCTAGCCACTGAGTTTGATCTCTGG  750

seq1  AACCATTGGTGGGCTGAGAGAACTGTCTGTCAGAGTTGTCCTCTGACCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTGGTGGGCTGAGAGAACTGTCTGTCAGAGTTGTCCTCTGACCTC  800

seq1  TACACATTTCCTATGACATGCATATGTCCCCTTTCAATAACTTAAATAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATTTCCTATGACATGCATATGTCCCCTTTCAATAACTTAAATAAA  850

seq1  ATGCAAACAAAACCCAAACCAAAAGGCAATCAAGAACATTGCCTGAGGCC  900
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATGCAAACAAAACCCAAACCAAAAGGC-ATCAAGAACATTGCCTGAGGCC  899

seq1  GAAGCAATAGGCTGGGCCGTCCTCAGAGACCCCAGACAGCTGCAGTGGCA  950
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAATA-GCTGGGCCGTCCTCAGAGACCCCAGACAGCTGCAGTGGCA  948

seq1  GTGGCAGTACTGGTCGGTGACACAGACACTCAACTCTACTGTGTTTTTCC  1000
      ||||||||||||||| |||| |||||||||| |||||||||||||||| |
seq2  GTGGCAGTACTGGTC-GTGAAACAGACACTC-ACTCTACTGTGTTTTT-C  995

seq1  CGTCATGTTCTTGTCAGATGTGTGGCTTTGGTTGGACACACAGACCGTGC  1050
      |||||||||||||| |||||||| ||||| ||||   | ||  | |||||
seq2  CGTCATGTTCTTGT-AGATGTGT-GCTTT-GTTG---AAACCAAACGTGC  1039

seq1  TAATAATTGTAGCTAATACATGGAGTCATC-TCAGAACAGTCTACAGGAG  1099
      ||||||||||||   ||||||||||||||| |||| |||||||||| || 
seq2  TAATAATTGTAG--TATACATGGAGTCATCTTCAG-ACAGTCTACA-GAA  1085

seq1  ACTGGGCTCCTTAATCCTGTGAAGGCAGTTTGGGATCTCTAATTACTTGG  1149
      |||||| | ||||||| |||||| |||| |||||||||  |||||||| |
seq2  ACTGGG-TTCTTAATCTTGTGAAAGCAGCTTGGGATCTTCAATTACTT-G  1133

seq1  TTGAAAA  1156
       ||||||
seq2  CTGAAAA  1140

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BAC

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Alignment Information