BAC Information

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BAC

Clone NameB6Ng01-096L17
Chromosome12 (Build37)
Map Location 67,050,481 - 67,184,425
singlet/doubletdoublet
Overlap genenone
Upstream geneKlhl28, A430041B07Rik, Prpf39, Fkbp3, Fancm, C79407, Wdr20b
Downstream geneLOC100040700, EG238217, Mdga2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096L17.bB6Ng01-096L17.g
ACCDH907296DH907297
length9781,124
definitionDH907296|Mus musculus domesticus DNA, BAC clone: B6Ng01-096L17, 5' end.DH907297|Mus musculus domesticus DNA, BAC clone: B6Ng01-096L17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,050,481 - 67,051,461)(67,183,298 - 67,184,425)
sequence
gaattctttctgtgataatgtgatattctgtctttatcaacccctactgt
ttcaaagggaacaatgttgcctcaagtttttgctaagaatatacacgcat
gtgatcagaaggactcttggcttgaaaataggaggtctatctacattgcc
aaaattttactggtacacttacaacagagtagtccagaagcctttagacc
tagtcccatgtttgcacatactttatccaattgctctttaaactgaacta
aggggacattgttctgccatgatatccttctagcaaaaccagcacagatt
gctccttgctttgatatttgggaacagttggcctgtgatcagaaaagggg
atgtgaaaattatagggatagcatacaggctacaatggcgattttttgtt
tttgtttttgtttttgctcttttagttggaaataattccaacaattttaa
aattatagagaaagttataagactataacaaagaacacccttacccaagc
ccagaattgtaagggaatcagttgccaagaaaagggcctaatgctcacta
gcctcaaatacatgagtttgtgtgtacttgctaaaagaaagggagcaggg
tttccaaaaggaccacagtataacaatcaaagccaggcagtggacactga
tgctccctatcaatgaaccttatcaggttttactagcagtaccattaatt
gatatatagatatagacatagacatagacatcgacatcgacatagacaga
catagacatagacatagacatagacatagacatagacatagacatagaca
tagacatagacatagaaatagacatagacatacataaacagacataggca
taggcataggcaaagacatagacatagacatagacatagacatagacata
gacatagacatagacatagacatagacatagacatagacatagacataca
taaacagacatagcatagcaaagcaaag
gaattcctgtgtatatgttgcttaaatacctacccttattcatgaaattg
tctgtaagattttatagagttgaactggtgtgaaatataaaattacacaa
ggggctctatgcccctcagaaattcctaatttatttctctaccctatatt
atttaaatttttatgactaagccgggcgtggtggcacacgcctttaatcc
cagcacttgggaggcagaggcaggcggatttctgagttcgaggccagcct
ggtctacagagtgagttccaggtcagccagggctacacagagaaaccctg
tctcgaaaaaccaaaataaataaataaataaataaataaataaataaata
aattatgattaatacataccatttaatttcatattctgcttgtttcacat
aacaagtcaataagacatttaatactaggtaatgaggtattattagacgt
aattatgtataaagtaatactagaataaattaattggtatatatccataa
aactaatatattttatggtatttaatgggtatgaaaaattgagacattgt
acattttaaactaagtatgggatagattttcaataggaaagtgactcaaa
tcatatcatagcaatcaacataaattatgaggctacaggcaatgacagga
tttaaataagattacacttacagaggttgctgacaatttatttgccacat
atgtgatttattaatgagaagtgtattttatggaaattatgacttagaat
ttggagtactgggaacctagtatgtattgacactgaataataaatgccag
atatttaacgtaagtatttcaaaaagtaatttcttaggacatgtttgagc
aaagtatcatgaacttgttaatagaatttctaggccatgataatttgttt
ctaagtctaatagttaagtaattgtgacaagtatagacctttgttactta
catgaatctttaacctctttaaactaaaattgacaaattagcaaacactt
acagatcacaggacaccacagatcttactctgagtttcccactttgctga
gagaaagaactgatcataggacagtagtttattcaacagctacaagttca
aaagagagcttgaatgatcgtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_67050481_67051461
seq2: B6Ng01-096L17.b_44_1021

seq1  GAATTCTTTCTGTGATAATGTGATATTCTGTCTTTATCAACCCCTACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTGTGATAATGTGATATTCTGTCTTTATCAACCCCTACTGT  50

seq1  TTCAAAGGGAACAATGTTGCCTCAAGTTTTTGCTAAGAATATACACGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGGGAACAATGTTGCCTCAAGTTTTTGCTAAGAATATACACGCAT  100

seq1  GTGATCAGAAGGACTCTTGGCTTGAAAATAGGAGGTCTATCTACATTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCAGAAGGACTCTTGGCTTGAAAATAGGAGGTCTATCTACATTGCC  150

seq1  AAAATTTTACTGGTACACTTACAACAGAGTAGTCCAGAAGCCTTTAGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTACTGGTACACTTACAACAGAGTAGTCCAGAAGCCTTTAGACC  200

seq1  TAGTCCCATGTTTGCACATACTTTATCCAATTGCTCTTTAAACTGAACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCCATGTTTGCACATACTTTATCCAATTGCTCTTTAAACTGAACTA  250

seq1  AGGGGACATTGTTCTGCCATGATATCCTTCTAGCAAAACCAGCACAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGACATTGTTCTGCCATGATATCCTTCTAGCAAAACCAGCACAGATT  300

seq1  GCTCCTTGCTTTGATATTTGGGAACAGTTGGCCTGTGATCAGAAAAGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTGCTTTGATATTTGGGAACAGTTGGCCTGTGATCAGAAAAGGGG  350

seq1  ATGTGAAAATTATAGGGATAGCATACAGGCTACAATGGCGATTTTTTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAAATTATAGGGATAGCATACAGGCTACAATGGCGATTTTTTGTT  400

seq1  TTTGTTTTTGTTTTTGCTCTTTTAGTTGGAAATAATTCCAACAATTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTGTTTTTGCTCTTTTAGTTGGAAATAATTCCAACAATTTTAA  450

seq1  AATTATAGAGAAAGTTATAAGACTATAACAAAGAACACCCTTACCCAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAGAGAAAGTTATAAGACTATAACAAAGAACACCCTTACCCAAGC  500

seq1  CCAGAATTGTAAGGGAATCAGTTGCCAAGAAAAGGGCCTAATGCTCACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATTGTAAGGGAATCAGTTGCCAAGAAAAGGGCCTAATGCTCACTA  550

seq1  GCCTCAAATACATGAGTTTGTGTGTACTTGCTAAAAGAAAGGGAGCAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAAATACATGAGTTTGTGTGTACTTGCTAAAAGAAAGGGAGCAGGG  600

seq1  TTTCCAAAAGGACCACAGTATAACAATCAAAGCCAGGCAGTGGACACTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAAAGGACCACAGTATAACAATCAAAGCCAGGCAGTGGACACTGA  650

seq1  TGCTCCCTATCAATGAACCTTATCAGGTTTTACTAGCAGTACCATTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCTATCAATGAACCTTATCAGGTTTTACTAGCAGTACCATTAATT  700

seq1  GATATATAGATATAGACATAGACATAGACATCGACATCGACATAGACAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATAGATATAGACATAGACATAGACATCGACATCGACATAGACAGA  750

seq1  CATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACATAGACATAGACATAGACATAGACATAGACATAGACATAGACA  800

seq1  TAGACATAGACATAGAAATAGACATAGACATACATAAACAGACATAGGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATAGACATAGAAATAGACATAGACATACATAAACAGACATAGGCA  850

seq1  TAGGCATAGGCAAAGACATAGACATAGACATAGACATAGACATAGACATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATAGGCAAAGACATAGACATAGACATAGACATAGACATAGACATA  900

seq1  GACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGACATAGACATAGACATAGACATAGACATAGACATAGACATACA  950

seq1  TAAACAGACATAGGCATAGGCAAAGGCAAAG  981
      |||||||||||| ||||| ||||| ||||||
seq2  TAAACAGACATA-GCATA-GCAAA-GCAAAG  978

seq1: chr12_67183298_67184425
seq2: B6Ng01-096L17.g_68_1191 (reverse)

seq1  TTCACTGATCATTTCAGGCTCT-TTTGAAACTTGTAGCTGTTGTATAAAC  49
      ||||| ||||| |||| ||||| |||  ||||||||||||||| ||||||
seq2  TTCAC-GATCA-TTCAAGCTCTCTTTTGAACTTGTAGCTGTTGAATAAAC  48

seq1  TACTGTCCTGTGATCAGTTCTTTTCTCTCAGCAAAGGTGGGAAACTCAGA  99
      ||||||||| |||||||||| |||||||||||||| ||||||||||||||
seq2  TACTGTCCTATGATCAGTTC-TTTCTCTCAGCAAA-GTGGGAAACTCAGA  96

seq1  GTTAAGATCTGTGTGTTCCTGTGATCTGTAGTTGTTTTGCTTATTTGTCA  149
      | |||||||||||   ||||||||||||||  || |||||| ||||||||
seq2  G-TAAGATCTGTGGTGTCCTGTGATCTGTAAGTG-TTTGCTAATTTGTCA  144

seq1  ATTTTAGTTTAAAGAGGTTAAAGATTCATGTAAGTAACAAAGGTCTATAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTTTAAAGAGGTTAAAGATTCATGTAAGTAACAAAGGTCTATAC  194

seq1  TTGTCACAATTACTTAACTATTAGACTTAGAAACAAATTATCATGGCCTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACAATTACTTAACTATTAGACTTAGAAACAAATTATCATGGCCTA  244

seq1  GAAATTCTATTAACAAGTTCATGATACTTTGCTCAAACATGTCCTAAGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCTATTAACAAGTTCATGATACTTTGCTCAAACATGTCCTAAGAA  294

seq1  ATTACTTTTTG-AATACTTACGTTAAATATCTGGCATTTATTATTCAGTG  348
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTTTTGAAATACTTACGTTAAATATCTGGCATTTATTATTCAGTG  344

seq1  TCAATACATACTAGGTTCCCAGTACTCCAAATTCTAAGTCATAATTTCCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACATACTAGGTTCCCAGTACTCCAAATTCTAAGTCATAATTTCCA  394

seq1  TAAAATACACTTCTCATTAATAAATCACATATGTGGCAAATAAATTGTCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATACACTTCTCATTAATAAATCACATATGTGGCAAATAAATTGTCA  444

seq1  GCAACCTCTGTAAGTGTAATCTTATTTAAATCCTGTCATTGCCTGTAGCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTCTGTAAGTGTAATCTTATTTAAATCCTGTCATTGCCTGTAGCC  494

seq1  TCATAATTTATGTTGATTGCTATGATATGATTTGAGTCACTTTCCTATTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATTTATGTTGATTGCTATGATATGATTTGAGTCACTTTCCTATTG  544

seq1  AAAATCTATCCCATACTTAGTTTAAAATGTACAATGTCTCAATTTTTCAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTATCCCATACTTAGTTTAAAATGTACAATGTCTCAATTTTTCAT  594

seq1  ACCCATTAAATACCATAAAATATATTAGTTTTATGGATATATACCAATTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTAAATACCATAAAATATATTAGTTTTATGGATATATACCAATTA  644

seq1  ATTTATTCTAGTATTACTTTATACATAATTACGTCTAATAATACCTCATT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTCTAGTATTACTTTATACATAATTACGTCTAATAATACCTCATT  694

seq1  ACCTAGTATTAAATGTCTTATTGACTTGTTATGTGAAACAAGCAGAATAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGTATTAAATGTCTTATTGACTTGTTATGTGAAACAAGCAGAATAT  744

seq1  GAAATTAAATGGTATGTATTAATCATAATTTATTTATTTATTTATTTATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAAATGGTATGTATTAATCATAATTTATTTATTTATTTATTTATT  794

seq1  TATTTATTTATTTATTTTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTTATTTTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCC  844

seq1  CTGGCTGACCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGACCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGA  894

seq1  AATCCGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGTGCCAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGTGCCAC  944

seq1  CACGCCCGGCTTAGTCATAAAAATTTAAATAATATAGGGTAGAGAAATAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCCCGGCTTAGTCATAAAAATTTAAATAATATAGGGTAGAGAAATAA  994

seq1  ATTAGGAATTTCTGAGGGGCATAGAGCCCCTTGTGTAATTTTATATTTCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAATTTCTGAGGGGCATAGAGCCCCTTGTGTAATTTTATATTTCA  1044

seq1  CACCAGTTCAACTCTATAAAATCTTACAGACAATTTCATGAATAAGGGTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTTCAACTCTATAAAATCTTACAGACAATTTCATGAATAAGGGTA  1094

seq1  GGTATTTAAGCAACATATACACAGGAATTC  1128
      ||||||||||||||||||||||||||||||
seq2  GGTATTTAAGCAACATATACACAGGAATTC  1124