BAC Information

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BAC

Clone NameB6Ng01-097A11
Chromosome12 (Build37)
Map Location 71,940,503 - 72,059,522
singlet/doubletdoublet
Overlap geneFrmd6, Actr10
Upstream geneMap4k5, Spg3a, EG622339, Sav1, LOC100040999, Nin, ENSMUSG00000056391, Gm804, Pygl, Trim9, Txndc1, LOC100040965, LOC100041061
Downstream genePsma3, 3110056K07Rik, Arid4a, Timm9, LOC100041035, 2700049A03Rik, LOC666162, Dact1, LOC100041190, Daam1, LOC666213
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097A11.bB6Ng01-097A11.g
ACCDH907510DH907511
length1,1761,176
definitionDH907510|Mus musculus domesticus DNA, BAC clone: B6Ng01-097A11, 5' end.DH907511|Mus musculus domesticus DNA, BAC clone: B6Ng01-097A11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,058,338 - 72,059,522)(71,940,503 - 71,941,688)
sequence
gaattcttcatccaactgctttggtgtctcaatcactaccatactcagca
acattaactataaaatttcacaaaaaagttaaaataaaaaagtgtaagcc
aggtgtggtggcccatgcctgtaattccacgacttgagaggaaaaggcag
aagaaatttgtagaattgtcacaagttcaagggtagcctggtctatacag
tgaatacaggccaaaaacaaaccaaaaaacaagaaaacacaagtgataac
aacaacaacaacaacagtattctataaaattctaataggaaataagtaat
aaaagggtttgaaaaattactttattcttacaaataatatatgacaagga
aaaatgcagaagataacacttaaaaatattctttgaagttactcttagaa
caatgggaaattgtataaatacctgtaaaagggaatccaaaattaaagtg
gcaactgacttctcctcattatcttgttcaaaaaggatttccacaactga
atctctaatgaaattaaaaagagaacactttatagtcaccatataacata
gaagaatcattagttacactgacataatgttttaagtggcagtaccatct
tcatgaattattgaataaactagaaagcttttctccttgtaaatggggaa
atggtgtatctacctccaggggctgagaagattcagtgagtgtgtaaaac
aaggtctggcatacagaaaacattcctcaagtgttagctactgctctaga
aagatgtacatgtgttggatttcatgacacctcaaacataactgaaaaga
agttatactctgtaaaagctaacatgatttcacatgcctgtaagtcagga
atacatgagattttacaacaggtaacaaaaccctttgttttttaagtttt
tctgaagcaagatcccatgtagctgaagctggcttcaactccttctcctc
tttcttgtctctaccacccacgtgcggaaacctcagtgtgagccaccaca
cctggcatttcacatgtttttttaaattttaaaatgacacaaagctgata
tggtgactcatactcagcacatgttttgtgcaccatgtggatgttgatgc
ccacaaggccagagccgtgcactgacacctcagcactagagttaagatgg
tctgagttacatggcgctggaattga
gaattcactatgtgggccaggttaaccttgaactcacaagtttcagcctg
tacctactgatgaacacctttaatcccagcacctggaggcaggggcagga
ggatctctgagttccaggccagcctggtctacatagcgagtctcaggaca
gctagagctacacagagaaaccctgtcatcttcaaaacaaaacagtaaaa
gaaaaaaaggatacagtgagatcttacagcagaccttaaaataatcagaa
tataaaaacatagactttgggagaaaattcatgaagatgtaattcctgta
actgtcaaaaccagggggtggggtttgaatgtttaaagaaggaaaaacaa
atttccaaagagatttcttaggctgttgtcattgcagcagtgttaatact
ttatgactccagaatttgtttggtgattcaatctctttttgaagatcgaa
tgaaagacaaaaagaaaattaggctgtaaatgtaagacagctaatttgca
aagtaacttattttgatgaatctattatttcaaagacattcatagtaagg
actgttctttctgagatgagagaaataaagataagtgagcgcccctcccc
catgagacatgggtggcacctttatttagtgagtccaagctggtaactga
agagtgccagtgttttccccatctgatttctttaggaagtgatgagaccc
atggagaggaatgtttgtgtatattccttcaccacaaccggaaattgctc
tggttttcttccaatgaaaagagaattctctgcttaacgaaacctatgtg
aatgcagtgttaatgttttcatagtaaattaaagtcagcttcagggggcc
agtttgacatattttaaggaattcaagttactcatagaaggtgatttttt
aaataacattttaaagcctactacttcatataaacctaagattttcaatg
tacattaaaaatattttttcaaaatcaaattaggaacagtcacacacaca
cacacacacacacacaaatgtctagtgccttaaattacagtaaattctaa
atggaattttaaaatgaagcctttctaatcacaggagtccattccagact
tcaaaaaagacatttagacgattgtacctcactggatatttggcctttac
aggtgcctagaagaacacttaaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_72058338_72059522
seq2: B6Ng01-097A11.b_45_1220 (reverse)

seq1  TCAATTCCCAGCGCCATTTGGTAACTCAGAACCATCTCTAACTCTAGTTG  50
      |||||| ||||||||||   ||||||||| ||||||| ||||||||| ||
seq2  TCAATT-CCAGCGCCAT---GTAACTCAG-ACCATCT-TAACTCTAG-TG  43

seq1  CTGA-GTGTCCAGTGCACGGCTCTGGCCTTTGTGGGCATC-ACATCCACA  98
      |||| |||| |||||||||||||||||| ||||||||||| |||||||||
seq2  CTGAGGTGT-CAGTGCACGGCTCTGGCC-TTGTGGGCATCAACATCCACA  91

seq1  TGGTGCAC-AGACATGTGCTGGAGTATGAGTCACCATATTCAGCTTTGTG  147
      |||||||| | ||||||||| ||||||||||||||||| |||||||||||
seq2  TGGTGCACAAAACATGTGCT-GAGTATGAGTCACCATA-TCAGCTTTGTG  139

seq1  TCATTTTAAAATTT-AAAAAACATGTGAAATGCCAGGTGTGGTGGCTCAC  196
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCATTTTAAAATTTAAAAAAACATGTGAAATGCCAGGTGTGGTGGCTCAC  189

seq1  ACCTGAGGTTTCCGCACGTGGGTGGTAGAGACAAGAAAGAGGAGAAGGAG  246
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-CTGAGGTTTCCGCACGTGGGTGGTAGAGACAAGAAAGAGGAGAAGGAG  238

seq1  TTTGAAGCCAGCTTCAGCTACATGGGATCTTGCTTCAGAAAAACTTAAAA  296
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTGAAGCCAGCTTCAGCTACATGGGATCTTGCTTCAGAAAAACTTAAAA  287

seq1  AACAAAGGGTTTTGTTACCTGTTGTAAAATCTCATGTATTCCTGACTTAC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGGGTTTTGTTACCTGTTGTAAAATCTCATGTATTCCTGACTTAC  337

seq1  AGGCATGTGAAATCATGTTAGCTTTTACAGAGTATAACTTCTTTTCAGTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGTGAAATCATGTTAGCTTTTACAGAGTATAACTTCTTTTCAGTT  387

seq1  ATGTTTGAGGTGTCATGAAATCCAACACATGTACATCTTTCTAGAGCAGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGAGGTGTCATGAAATCCAACACATGTACATCTTTCTAGAGCAGT  437

seq1  AGCTAACACTTGAGGAATGTTTTCTGTATGCCAGACCTTGTTTTACACAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAACACTTGAGGAATGTTTTCTGTATGCCAGACCTTGTTTTACACAC  487

seq1  TCACTGAATCTTCTCAGCCCCTGGAGGTAGATACACCATTTCCCCATTTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGAATCTTCTCAGCCCCTGGAGGTAGATACACCATTTCCCCATTTA  537

seq1  CAAGGAGAAAAGCTTTCTAGTTTATTCAATAATTCATGAAGATGGTACTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGAAAAGCTTTCTAGTTTATTCAATAATTCATGAAGATGGTACTG  587

seq1  CCACTTAAAACATTATGTCAGTGTAACTAATGATTCTTCTATGTTATATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTAAAACATTATGTCAGTGTAACTAATGATTCTTCTATGTTATATG  637

seq1  GTGACTATAAAGTGTTCTCTTTTTAATTTCATTAGAGATTCAGTTGTGGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTATAAAGTGTTCTCTTTTTAATTTCATTAGAGATTCAGTTGTGGA  687

seq1  AATCCTTTTTGAACAAGATAATGAGGAGAAGTCAGTTGCCACTTTAATTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTTTTGAACAAGATAATGAGGAGAAGTCAGTTGCCACTTTAATTT  737

seq1  TGGATTCCCTTTTACAGGTATTTATACAATTTCCCATTGTTCTAAGAGTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCCCTTTTACAGGTATTTATACAATTTCCCATTGTTCTAAGAGTA  787

seq1  ACTTCAAAGAATATTTTTAAGTGTTATCTTCTGCATTTTTCCTTGTCATA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAAGAATATTTTTAAGTGTTATCTTCTGCATTTTTCCTTGTCATA  837

seq1  TATTATTTGTAAGAATAAAGTAATTTTTCAAACCCTTTTATTACTTATTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTGTAAGAATAAAGTAATTTTTCAAACCCTTTTATTACTTATTT  887

seq1  CCTATTAGAATTTTATAGAATACTGTTGTTGTTGTTGTTGTTATCACTTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTAGAATTTTATAGAATACTGTTGTTGTTGTTGTTGTTATCACTTG  937

seq1  TGTTTTCTTGTTTTTTGGTTTGTTTTTGGCCTGTATTCACTGTATAGACC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTTGTTTTTTGGTTTGTTTTTGGCCTGTATTCACTGTATAGACC  987

seq1  AGGCTACCCTTGAACTTGTGACAATTCTACAAATTTCTTCTGCCTTTTCC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTACCCTTGAACTTGTGACAATTCTACAAATTTCTTCTGCCTTTTCC  1037

seq1  TCTCAAGTCGTGGAATTACAGGCATGGGCCACCACACCTGGCTTACACTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGTCGTGGAATTACAGGCATGGGCCACCACACCTGGCTTACACTT  1087

seq1  TTTTATTTTAACTTTTTTGTGAAATTTTATAGTTAATGTTGCTGAGTATG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTAACTTTTTTGTGAAATTTTATAGTTAATGTTGCTGAGTATG  1137

seq1  GTAGTGATTGAGACACCAAAGCAGTTGGATGAAGAATTC  1185
      |||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGATTGAGACACCAAAGCAGTTGGATGAAGAATTC  1176

seq1: chr12_71940503_71941688
seq2: B6Ng01-097A11.g_68_1243

seq1  GAATTCACTATGTGTGCCAGGTTAACCTTGAACTCACAAGTTTCAGCCTG  50
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTGGGCCAGGTTAACCTTGAACTCACAAGTTTCAGCCTG  50

seq1  TACCTACTGATGAACACCTTTAATCCCAGCACCTGGAGGCAGGGGCAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTACTGATGAACACCTTTAATCCCAGCACCTGGAGGCAGGGGCAGGA  100

seq1  GGATCTCTGAGTTCCAGGCCAGCCTGGTCTACATAGCGAGTCTCAGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCTGAGTTCCAGGCCAGCCTGGTCTACATAGCGAGTCTCAGGACA  150

seq1  GCTAGAGCTACACAGAGAAACCCTGTCATCTTCAAAACAAAACAGTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGCTACACAGAGAAACCCTGTCATCTTCAAAACAAAACAGTAAAA  200

seq1  GAAAAAAAGGATACAGTGAGATCTTACAGCAGACCTTAAAATAATCAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAGGATACAGTGAGATCTTACAGCAGACCTTAAAATAATCAGAA  250

seq1  TATAAAAACATAGACTTTGGGAGAAAATTCATGAAGATGTAATTCCTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAACATAGACTTTGGGAGAAAATTCATGAAGATGTAATTCCTGTA  300

seq1  ACTGTCAAAACCAGGGGGTGGGGTTTGAATGTTTAAAGAAGGAAAAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCAAAACCAGGGGGTGGGGTTTGAATGTTTAAAGAAGGAAAAACAA  350

seq1  ATTTCCAAAGAGATTTCTTAGGCTGTTGTCATTGCAGCAGTGTTAATACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAAAGAGATTTCTTAGGCTGTTGTCATTGCAGCAGTGTTAATACT  400

seq1  TTATGACTCCAGAATTTGTTTGGTGATTCAATCTCTTTTTGAAGATCGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACTCCAGAATTTGTTTGGTGATTCAATCTCTTTTTGAAGATCGAA  450

seq1  TGAAAGACAAAAAGAAAATTAGGCTGTAAATGTAAGACAGCTAATTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGACAAAAAGAAAATTAGGCTGTAAATGTAAGACAGCTAATTTGCA  500

seq1  AAGTAACTTATTTTGATGAATCTATTATTTCAAAGACATTCATAGTAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACTTATTTTGATGAATCTATTATTTCAAAGACATTCATAGTAAGG  550

seq1  ACTGTTCTTTCTGAGATGAGAGAAATAAAGATAAGTGAGCGCCCCTCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCTTTCTGAGATGAGAGAAATAAAGATAAGTGAGCGCCCCTCCCC  600

seq1  CATGAGACATGGGTGGCACCTTTATTTAGTGAGTCCAAGCTGGTAACTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGACATGGGTGGCACCTTTATTTAGTGAGTCCAAGCTGGTAACTGA  650

seq1  AGAGTGCCAGTGTTTTCCCCATCTGATTTCTTTAGGAAGTGATGAGACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCCAGTGTTTTCCCCATCTGATTTCTTTAGGAAGTGATGAGACCC  700

seq1  ATGGAGAGGAATGTTTGTGTATATTCCTTCACCACAACCGGAAATTGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGAGGAATGTTTGTGTATATTCCTTCACCACAACCGGAAATTGCTC  750

seq1  TGGTTTTCTTCCAATGAAAAGAGAATTCTCTGCTTAACGAAACCTATGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTCTTCCAATGAAAAGAGAATTCTCTGCTTAACGAAACCTATGTG  800

seq1  AATGCAGTGTTAATGTTTTCATAGTAAATTAAAGTCAGCTTCAGGGGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGTGTTAATGTTTTCATAGTAAATTAAAGTCAGCTTCAGGGGGCC  850

seq1  AGTTTGACATATTTTAAGGAATTCAAGTTACTCATAGAAGGTGATTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGACATATTTTAAGGAATTCAAGTTACTCATAGAAGGTGATTTTTT  900

seq1  AAATAACATTTTAAAGCCTACTACTTCATATAAACCTAAGATTTTCAAAT  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAATAACATTTTAAAGCCTACTACTTCATATAAACCTAAGATTTTC-AAT  949

seq1  GTAACATTAAAAATATTTTTTCAAAAATCAAATTAAGGAACAGTTCACAC  1000
      || ||||||||||||||||||| ||||||||||| |||||||| ||||||
seq2  GT-ACATTAAAAATATTTTTTC-AAAATCAAATT-AGGAACAG-TCACAC  995

seq1  ACACACACACACACACACACAAATGTCTAGTGCCTAAAATTTACAGTAAA  1050
      ||||||||||||||||||||||||||||||||||| ||| ||||||||||
seq2  ACACACACACACACACACACAAATGTCTAGTGCCTTAAA-TTACAGTAAA  1044

seq1  TTCTAATTGAATATGTTTAAAATGAAGCCTTTCTAATCACAAGAGTTCAT  1100
      |||||| || | || |||||||||||||||||||||||||| |||| |||
seq2  TTCTAAATGGA-AT-TTTAAAATGAAGCCTTTCTAATCACAGGAGTCCAT  1092

seq1  TTCAGACATCAGAAAAAGGACATTTAGACGATTTGTAACTCACTGAATTA  1150
      | ||||| ||  ||||| ||||||||||||| ||||| ||||||| ||  
seq2  TCCAGACTTC--AAAAAAGACATTTAGACGA-TTGTACCTCACTGGATAT  1139

seq1  TTTGCTTTTACAGGTGCCTAGAGAAACA-TTAAAAGA  1186
      || || ||||||||||||||||  |||| ||||||||
seq2  TTGGCCTTTACAGGTGCCTAGAAGAACACTTAAAAGA  1176