BAC Information

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BAC

Clone NameB6Ng01-097K04
Chromosome12 (Build37)
Map Location 97,028,525 - 97,029,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC217786, LOC100039603, LOC667688, Flrt2
Downstream gene1700019M22Rik, LOC100039664
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097K04.bB6Ng01-097K04.g
ACCDH907953DH907954
length8881,173
definitionDH907953|Mus musculus domesticus DNA, BAC clone: B6Ng01-097K04, 5' end.DH907954|Mus musculus domesticus DNA, BAC clone: B6Ng01-097K04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaatggctgagatgcacctaaagaaatgttcaacatccttagt
catcagggaaatgcaatcctgagattccacctcacaccagtcataatggc
taagatagaaaaactcaggagacagcagattctggcaaggatgtggagaa
agaggaagactcctccattgcatgtttcactttaagcaattaaaatatga
gtttaaaggaaacttcataacccatatattgatatgagtatacatgtgtt
attttatttggttaggtattttcttcatttacattttcaatgctatctcc
gaagtcccccacaccctaccctcactcccctacccacccactcccacttc
ttggccctggcgattccctgtactgaggcatataaagtttgcaataccag
tgggcctctctttccactgatggccaactaggtcatcttctgatacatat
gcagctagagaaacgagctcctggaggtactggttagttcatattgttgt
tcctggtaagtggatattatcccagaaacttagaatacccaagatgcaag
atacaatttgcaaaacgaatgaaactcaagaagaacaaagaccaaaatgt
ggacactttgccctttcttagaattgggaacaaaacacccatggaaggag
ttacagtgttcatttctcttaagcaatttcttttaaaaatgtaagacatg
aaaccagaagaattactgctgcctcctgggtgtggacagaagagactcga
agaagagcatgaggagaaaggacaaaataagatggagaaattgatccata
tgtggtatattgtatggaaatgtccttatggaacctatccttttgaatat
atatgtatatatgtgtgtgtgtgtgtgtgtatgtgggg

gaattcagttactcatctccacaatttaacagctcaccacagggtctgac
acatacccagtgcagagtaatactttgaaaaatgtgtggtagtagtgtcc
agaattttattctctatacaccagttatctgttgaaccatgggtatggcc
acttattttagtcattgtcaaaagcagaagagcttgttgcagtctcagat
gtcctgttgggtttaagttctgcttcactcttgttatttcctgcgaagtt
tagcttctgtttgtttattttgtgtgttgtcttgggaaaacagacaaaaa
aaaaaggaaacaaacaaaacaactgaagaagatgcatagaggaaatatac
atagaatcatcaagcagccagttctactgattttattttaaagcctggca
tgttgaacattatcctgaagcaattgagaagcaattaagagtatttactg
ctccgagagagaacccacatcaggaggttcacaaacatctgaaaacgtag
ttccatttcatctgtttccctcttccagccagcacaagtacctgcacaca
tgtggtaaatgtaaactaatagaggcctacacatatataaaattttcaaa
aaaaataataactttgaacaagttaggcaagtcacatacatactcatgaa
caacaggagtgatttgaatctcaaattattgtgactttgacttcctgtat
gacttcaatactccctcatacatgggataagatattcatgcctctgaggg
tttactagaggaaatggtggtgagaagaagtgagcgacaagcattacagc
taaaacctgaaaaatgtatgtagaggaaaacaacaggaaacacttttcat
tacttcagataagaattaaataactaaggagaaatatttataaaacacat
agaggaaaacttcatttgagttttctaaaatgctgaatttgtcttctatt
tctgcaagtctatgatgttagaagctagcaattctttcatacttagagaa
ataaaattatgagaataattacaaaggataaatattacatcatatgcagc
attgtaatttagagtaataaaatctttcaacaccaccttcccacatttcc
atcccctaaatctgaaacaatacttttttttttttaaatcagagaatgca
tctcgaaataattagttattctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_97028525_97029698
seq2: B6Ng01-097K04.g_68_1240

seq1  GAATTCAGTTACTCATCTCCACAATTTAACAGCTCACCACAGGGTCTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTACTCATCTCCACAATTTAACAGCTCACCACAGGGTCTGAC  50

seq1  ACATACCCAGTGCAGAGTAATACTTTGAAAAATGTGTGGTAGTAGTGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCCAGTGCAGAGTAATACTTTGAAAAATGTGTGGTAGTAGTGTCC  100

seq1  AGAATTTTATTCTCTATACACCAGTTATCTGTTGAACCATGGGTATGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTATTCTCTATACACCAGTTATCTGTTGAACCATGGGTATGGCC  150

seq1  ACTTATTTTAGTCATTGTCAAAAGCAGAAGAGCTTGTTGCAGTCTCAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTTAGTCATTGTCAAAAGCAGAAGAGCTTGTTGCAGTCTCAGAT  200

seq1  GTCCTGTTGGGTTTAAGTTCTGCTTCACTCTTGTTATTTCCTGCGAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTTGGGTTTAAGTTCTGCTTCACTCTTGTTATTTCCTGCGAAGTT  250

seq1  TAGCTTCTGTTTGTTTATTTTGTGTGTTGTCTTGGGAAAACAGACAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCTGTTTGTTTATTTTGTGTGTTGTCTTGGGAAAACAGACAAAAA  300

seq1  AAAAAGGAAACAAACAAAACAACTGAAGAAGATGCATAGAGGAAATATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGAAACAAACAAAACAACTGAAGAAGATGCATAGAGGAAATATAC  350

seq1  ATAGAATCATCAAGCAGCCAGTTCTACTGATTTTATTTTAAAGCCTGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATCATCAAGCAGCCAGTTCTACTGATTTTATTTTAAAGCCTGGCA  400

seq1  TGTTGAACATTATCCTGAAGCAATTGAGAAGCAATTAAGAGTATTTACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAACATTATCCTGAAGCAATTGAGAAGCAATTAAGAGTATTTACTG  450

seq1  CTCCGAGAGAGAACCCACATCAGGAGGTTCACAAACATCTGAAAACGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGAGAGAGAACCCACATCAGGAGGTTCACAAACATCTGAAAACGTAG  500

seq1  TTCCATTTCATCTGTTTCCCTCTTCCAGCCAGCACAAGTACCTGCACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTCATCTGTTTCCCTCTTCCAGCCAGCACAAGTACCTGCACACA  550

seq1  TGTGGTAAATGTAAACTAATAGAGGCCTACACATATATAAAATTTTCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTAAATGTAAACTAATAGAGGCCTACACATATATAAAATTTTCAAA  600

seq1  AAAAATAATAACTTTGAACAAGTTAGGCAAGTCACATACATACTCATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATAACTTTGAACAAGTTAGGCAAGTCACATACATACTCATGAA  650

seq1  CAACAGGAGTGATTTGAATCTCAAATTATTGTGACTTTGACTTCCTGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGAGTGATTTGAATCTCAAATTATTGTGACTTTGACTTCCTGTAT  700

seq1  GACTTCAATACTCCCTCATACATGGGATAAGATATTCATGCCTCTGAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCAATACTCCCTCATACATGGGATAAGATATTCATGCCTCTGAGGG  750

seq1  TTTACTAGAGGAAATGGTGGTGAGAAGAAGTGAGCGACAAGCATTACAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTAGAGGAAATGGTGGTGAGAAGAAGTGAGCGACAAGCATTACAGC  800

seq1  TAAAACCTGAAAAATGTATGTAGAGGAAAACAACAGGAAACAC-TTTCAT  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAAAACCTGAAAAATGTATGTAGAGGAAAACAACAGGAAACACTTTTCAT  850

seq1  TACTTCAGATAAGAATTAAATAACTAAGGAGAAATATTTATAAAACACAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCAGATAAGAATTAAATAACTAAGGAGAAATATTTATAAAACACAT  900

seq1  AGAGGAAAAACTTCATTTGAGTTTTCTAAAATGCTGAATTTGTCTTCTAT  949
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGG-AAAACTTCATTTGAGTTTTCTAAAATGCTGAATTTGTCTTCTAT  949

seq1  TTCTGCAAGTCTATGATGTTAGAAGCTAGCAATTCTTTCATACTTAGAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCAAGTCTATGATGTTAGAAGCTAGCAATTCTTTCATACTTAGAGA  999

seq1  AATAAAATTATGAGAATAA-TACAAAGGAT-AATATTACATCATATGCAG  1047
      ||||||||||||||||||| |||||||||| |||||||||||||||||||
seq2  AATAAAATTATGAGAATAATTACAAAGGATAAATATTACATCATATGCAG  1049

seq1  CA-TGTAATTTAGAGTAAATAAAACATCTTTCAACACCACC-TCCCACA-  1094
      || ||||||||||||| ||||||  |||||||||||||||| ||||||| 
seq2  CATTGTAATTTAGAGT-AATAAA--ATCTTTCAACACCACCTTCCCACAT  1096

seq1  TTCCATCCCCTAAATCTGGAAACAATACTTTTTTTTTTTTAAATCAGAGA  1144
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTCCATCCCCTAAATCT-GAAACAATACTTTTTTTTTTTTAAATCAGAGA  1145

seq1  ATGCATTCTCAGAATAATTAGGTTATTCTT  1174
      ||||| ||||  |||||||| |||||||||
seq2  ATGCA-TCTCGAAATAATTA-GTTATTCTT  1173


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