BAC Information

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BAC

Clone NameB6Ng01-097L05
Chromosome12 (Build37)
Map Location 37,852,779 - 37,990,186
singlet/doubletdoublet
Overlap geneMeox2, A530016O06Rik
Upstream geneBzw2, Ankmy2, 1700108M19Rik, Sostdc1, 4930579E17Rik, LOC638858
Downstream geneLOC100043139, Dgkb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097L05.bB6Ng01-097L05.g
ACCDH907999DH908000
length1,1591,111
definitionDH907999|Mus musculus domesticus DNA, BAC clone: B6Ng01-097L05, 5' end.DH908000|Mus musculus domesticus DNA, BAC clone: B6Ng01-097L05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,989,013 - 37,990,186)(37,852,779 - 37,853,905)
sequence
gaattcatgatcttcctgcctcggcctcctgactgctgggttaacaagca
tatgaaaaaaaaatgtctagcctttgtctcattttgcactttaaaagttt
attcttattcattcttaagacaattaacaaataaactgctagtgtcctga
ataactgccaaatcgtgagaatgtttgtcatttttcttcttggttgtttt
gagttgctttagtctgacaaaaataagaattctgaaagcatccaacaaga
tccccagtactgtgtgaaatgtaacttgcatgacagaaagcagaattgtc
ataactgaggctgaggtcgttttcaggaaaattgagcaaattgcacaaaa
tttctagttacacaaagagaatagcttcagcaattattatacaaaatggc
aactatcatgaataatgatattgtattttgaaattcaatgagatattcct
gtctccactacaaagatactgagtttgtatgcttagtaaatcaaccgaga
cattggatacatactttgtaagattgtataatagaaaataactgtacata
attaaatacactttacatcaactaacttatttttttagaaataggacaaa
tcagtgtttttaaattaaaatacattttaaataaaggttatccattttaa
ataacaacaatataaatgacaacccttgttatagataataaagttaatca
gaaataatggttcaagtatattcattcatatactaaaattatagagtaaa
accttttattttctaatttccatttaagttattcagtttacaatgaactt
taaaataactttttaaataaatatactgatttaattcactgctaaataga
atgaaagagatcaaaaatttactgttactttgaaaaacctttgttaagtc
agattacatttgatgactgagttctgtgtttactattacaacttcctggc
taaagacacaggtactgtatgacatgtcttttttaaaacataccctacac
atctgtcgagcacacatctggacattgtggccaactcatcatttcttctt
gtatatcaggactgtcagattatttcaagaggagagcggaacaagtacat
ctttttctgttcagtttcataactacttttttactttacccaggaattca
tcaatgtaa
gaattcatgcctagtcctaaagtgtcatgaacataccattgatagttgac
aaatatgtaatactgatgtttattaaaatatttcatgagctgaaatatgg
ggcagttatttccagtggtgttttgaaatatcagatatactgaaatcctt
atgattcatcatggtttgttctattatccttatattacttccaaaatata
tttcaaattatgtttgttatcagattttttttgtcccaatataggataac
ccattttcttttctcttcttcagttatatgaaaaaaatcatgcacaatca
taaaagtgactgtcttgaattgcacgtttttgatttgccaaagcacacat
taccttgaacatttagagtgcggtgagaaggaggctggagctgttaggaa
agtgctttgtgtgatgtccacttaaccaataaatctgtcatcaccaaatg
gtctctgtttcctccgaaataaacaaatcgattttgagtcctttgataca
ggagacctccaggaaaacaaaagtcacttttgcttcatccttcaaaataa
catttttcataagtggacatgaggttcaagaagaccaggagtagtggggt
ctccacaccttatacaaagtccagaagactacataagggcagttattgaa
aaaaaaaacccataaaccttgactcaccaaaagtgtatgcataagccaag
aagggaacacttagggaaaagctctaagaagagagctgacgtttgggaaa
caggaaatcagcataggacagggtggtgtgtgcaggctctagttaaatta
gcgatggggtaattttacctttatattactccatattatagttttgtttt
gttttgttttttttaaggaggtgaagtttgtagctcagcttgcttggcct
catacttcatagtcttcttgatccagaggatcttcatatgaggactttaa
taagaaaaccagtcattgctgaattgttagccgcaagcactgataagatg
gggcatcctcttattgcttgtatgttcttcctcgacatctaaatataatt
ttatattatctatctatcaaggcaagaatgcctttaagtaatgcctgggg
atctatctagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_37989013_37990186
seq2: B6Ng01-097L05.b_45_1203 (reverse)

seq1  TTACATTTGATGATATCCTGGGGGTAAAGGTTAAAAAAAAGTAGTTTATG  50
      ||||| |||||||  ||||  ||||||||     |||||||||| |||||
seq2  TTACA-TTGATGAATTCCT--GGGTAAAG----TAAAAAAGTAG-TTATG  42

seq1  AAACCTGAACAGAAAAAGGATGTAACTTTGTTCCGCTCTCCTCTTTGAAA  100
      ||| ||||||||||||| ||||||   |||||||||||||||| ||||||
seq2  AAA-CTGAACAGAAAAA-GATGTA--CTTGTTCCGCTCTCCTC-TTGAAA  87

seq1  T-ATCTGACAGTTCCTGGATATACAGAAGGAAATGATGAGTTTGGCCAC-  148
      | ||||||||| |||| ||||||||  | ||||||||||| |||||||| 
seq2  TAATCTGACAG-TCCT-GATATACAAGAAGAAATGATGAG-TTGGCCACA  134

seq1  ATGTCCAGATGTGTGCTCGACAGATGTGTAGGGTTATGTTTTAAAAAAGA  198
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATGTCCAGATGTGTGCTCGACAGATGTGTAGGG-TATGTTTTAAAAAAGA  183

seq1  CATGTCATACAGTACCTGTGTCTTTAGCCAGGAAGTTGTAAATAGTAAAC  248
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CATGTCATACAGTACCTGTGTCTTTAGCCAGGAAGTTGT-AATAGTAAAC  232

seq1  ACAGAACTCAGTCATCAAATGTAATCTGACTTAAC-AAGGTTTTTCAAAG  297
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACAGAACTCAGTCATCAAATGTAATCTGACTTAACAAAGGTTTTTCAAAG  282

seq1  TAACAGTAAATTTTTGATCTCTTTCATTCTATTTAGCAGTGAATTAAATC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTAAATTTTTGATCTCTTTCATTCTATTTAGCAGTGAATTAAATC  332

seq1  AGTATATTTATTTAAAAAGTTATTTTAAAGTTCATTGTAAACTGAATAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATTTATTTAAAAAGTTATTTTAAAGTTCATTGTAAACTGAATAAC  382

seq1  TTAAATGGAAATTAGAAAATAAAAGGTTTTACTCTATAATTTTAGTATAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGGAAATTAGAAAATAAAAGGTTTTACTCTATAATTTTAGTATAT  432

seq1  GAATGAATATACTTGAACCATTATTTCTGATTAACTTTATTATCTATAAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATATACTTGAACCATTATTTCTGATTAACTTTATTATCTATAAC  482

seq1  AAGGGTTGTCATTTATATTGTTGTTATTTAAAATGGATAACCTTTATTTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTGTCATTTATATTGTTGTTATTTAAAATGGATAACCTTTATTTA  532

seq1  AAATGTATTTTAATTTAAAAACACTGATTTGTCCTATTTCTAAAAAAATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTATTTTAATTTAAAAACACTGATTTGTCCTATTTCTAAAAAAATA  582

seq1  AGTTAGTTGATGTAAAGTGTATTTAATTATGTACAGTTATTTTCTATTAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTTGATGTAAAGTGTATTTAATTATGTACAGTTATTTTCTATTAT  632

seq1  ACAATCTTACAAAGTATGTATCCAATGTCTCGGTTGATTTACTAAGCATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTTACAAAGTATGTATCCAATGTCTCGGTTGATTTACTAAGCATA  682

seq1  CAAACTCAGTATCTTTGTAGTGGAGACAGGAATATCTCATTGAATTTCAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCAGTATCTTTGTAGTGGAGACAGGAATATCTCATTGAATTTCAA  732

seq1  AATACAATATCATTATTCATGATAGTTGCCATTTTGTATAATAATTGCTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAATATCATTATTCATGATAGTTGCCATTTTGTATAATAATTGCTG  782

seq1  AAGCTATTCTCTTTGTGTAACTAGAAATTTTGTGCAATTTGCTCAATTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATTCTCTTTGTGTAACTAGAAATTTTGTGCAATTTGCTCAATTTT  832

seq1  CCTGAAAACGACCTCAGCCTCAGTTATGACAATTCTGCTTTCTGTCATGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAAACGACCTCAGCCTCAGTTATGACAATTCTGCTTTCTGTCATGC  882

seq1  AAGTTACATTTCACACAGTACTGGGGATCTTGTTGGATGCTTTCAGAATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACATTTCACACAGTACTGGGGATCTTGTTGGATGCTTTCAGAATT  932

seq1  CTTATTTTTGTCAGACTAAAGCAACTCAAAACAACCAAGAAGAAAAATGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTTGTCAGACTAAAGCAACTCAAAACAACCAAGAAGAAAAATGA  982

seq1  CAAACATTCTCACGATTTGGCAGTTATTCAGGACACTAGCAGTTTATTTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTCTCACGATTTGGCAGTTATTCAGGACACTAGCAGTTTATTTG  1032

seq1  TTAATTGTCTTAAGAATGAATAAGAATAAACTTTTAAAGTGCAAAATGAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGTCTTAAGAATGAATAAGAATAAACTTTTAAAGTGCAAAATGAG  1082

seq1  ACAAAGGCTAGACATTTTTTTTTCATATGCTTGTTAACCCAGCAGTCAGG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGCTAGACATTTTTTTTTCATATGCTTGTTAACCCAGCAGTCAGG  1132

seq1  AGGCCGAGGCAGGAAGATCATGAATTC  1174
      |||||||||||||||||||||||||||
seq2  AGGCCGAGGCAGGAAGATCATGAATTC  1159

seq1: chr12_37852779_37853905
seq2: B6Ng01-097L05.g_67_1177

seq1  GAATTCATGCCTAGTCCTAAAGTGTCATGAACATACCATTGATAGTTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCCTAGTCCTAAAGTGTCATGAACATACCATTGATAGTTGAC  50

seq1  AAATATGTAATACTGATGTTTATTAAAATATTTCATGAGCTGAAATATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTAATACTGATGTTTATTAAAATATTTCATGAGCTGAAATATGG  100

seq1  GGCAGTTATTTCCAGTGGTGTTTTGAAATATCAGATATACTGAAATCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTATTTCCAGTGGTGTTTTGAAATATCAGATATACTGAAATCCTT  150

seq1  ATGATTCATCATGGTTTGTTCTATTATCCTTATATTACTTCCAAAATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCATCATGGTTTGTTCTATTATCCTTATATTACTTCCAAAATATA  200

seq1  TTTCAAATTATGTTTGTTATCAGATTTTTTTTGTCCCAATATAGGATAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATTATGTTTGTTATCAGATTTTTTTTGTCCCAATATAGGATAAC  250

seq1  CCATTTTCTTTTCTCTTCTTCAGTTATATGAAAAAAATCATGCACAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTCTTTTCTCTTCTTCAGTTATATGAAAAAAATCATGCACAATCA  300

seq1  TAAAAGTGACTGTCTTGAATTGCACGTTTTTGATTTGCCAAAGCACACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTGACTGTCTTGAATTGCACGTTTTTGATTTGCCAAAGCACACAT  350

seq1  TACCTTGAACATTTAGAGTGCGGTGAGAAGGAGGCTGGAGCTGTTAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTGAACATTTAGAGTGCGGTGAGAAGGAGGCTGGAGCTGTTAGGAA  400

seq1  AGTGCTTTGTGTGATGTCCACTTAACCAATAAATCTGTCATCACCAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTTGTGTGATGTCCACTTAACCAATAAATCTGTCATCACCAAATG  450

seq1  GTCTCTGTTTCCTCCGAAATAAACAAATCGATTTTGAGTCCTTTGATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGTTTCCTCCGAAATAAACAAATCGATTTTGAGTCCTTTGATACA  500

seq1  GGAGACCTCCAGGAAAACAAAAGTCACTTTTGCTTCATCCTTCAAAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACCTCCAGGAAAACAAAAGTCACTTTTGCTTCATCCTTCAAAATAA  550

seq1  CATTTTTCATAAGTGGACATGAGGTTCAAGAAGACCAGGAGTAGTGGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCATAAGTGGACATGAGGTTCAAGAAGACCAGGAGTAGTGGGGT  600

seq1  CTCCACACCTTATACAAAGTCCAGAAGACTACATAAGGGCAGTTATTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACACCTTATACAAAGTCCAGAAGACTACATAAGGGCAGTTATTGAA  650

seq1  AAAAAAAACCCATAAACCTTGACTCACCAAAAGTGTATGCATAAGCCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACCCATAAACCTTGACTCACCAAAAGTGTATGCATAAGCCAAG  700

seq1  AAGGGAACACTTAGGGAAAAGCTCTAAGAAGAGAGCTGACGTTTGGGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAACACTTAGGGAAAAGCTCTAAGAAGAGAGCTGACGTTTGGGAAA  750

seq1  CAGGAAATCAGCATAGGACAGGGTGGTGTGTGCAGGCTCTAGTTAAATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAATCAGCATAGGACAGGGTGGTGTGTGCAGGCTCTAGTTAAATTA  800

seq1  GCGATGGGGTAATTTTACCTTTATATTACTCCATATTATAGTTTTGTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATGGGGTAATTTTACCTTTATATTACTCCATATTATAGTTTTGTTTT  850

seq1  GTTTTGTTTTTTTTTAAGGAGGTGAAGTTTGTAGCTCAGGCTTGCTTGGC  900
      |||||| ||||||||||||||||||||||||||||||| |||||||||||
seq2  GTTTTG-TTTTTTTTAAGGAGGTGAAGTTTGTAGCTCA-GCTTGCTTGGC  898

seq1  CTCATACTTCATAGTCTTCTTTGATCCAGAAGATCTTCATATGAGAACTT  950
      ||||||||||||||||||| |||||||||| |||||||||||||| ||||
seq2  CTCATACTTCATAGTCTTC-TTGATCCAGAGGATCTTCATATGAGGACTT  947

seq1  TAATAAGAAAACCAGTCATTGCTGAATAGTTAG-CGCAAGCACTGATTAA  999
      ||||||||||||||||||||||||||| ||||| |||||||||||| |||
seq2  TAATAAGAAAACCAGTCATTGCTGAATTGTTAGCCGCAAGCACTGA-TAA  996

seq1  GATGGGGCATCCTCTTATTTGCTTGTATGTATCTTCTCAGAACATCCTAA  1049
      ||||||||||||||||| |||||||||||| ||||| |   |||| ||||
seq2  GATGGGGCATCCTCTTA-TTGCTTGTATGT-TCTTC-CTCGACAT-CTAA  1042

seq1  ATATATATTTTATTATTATCTATCTTAATCAAAGCAAAAGAATGCCTTTA  1099
      ||||| |||||| ||||||||||||  ||||| ||  |||||||||||| 
seq2  ATATA-ATTTTA-TATTATCTATCT--ATCAAGGC--AAGAATGCCTTT-  1085

seq1  AAGTAAATGCCTGTGGATTCTATCTAGC  1127
      |||| |||||||| ||| ||||||||||
seq2  AAGT-AATGCCTGGGGA-TCTATCTAGC  1111