BAC Information

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BAC

Clone NameB6Ng01-097M04
Chromosome12 (Build37)
Map Location 32,631,616 - 32,631,704
singlet/doubletsinglet
Overlap geneHbp1
Upstream geneSh3yl1, LOC629656, 9030611O19Rik, LOC668781, LOC100043065, LOC100043514, EG629667, LOC100043068, Lamb1-1, Dld, LOC668786, Slc26a3, Cbll1, Slc26a4, LOC100043531, Bcap29, Dus4l, LOC100043081, Gpr22
Downstream genePrkar2b, Pik3cg, 2010109K11Rik, LOC100043548, Pbef1, LOC100043553, 4933406C10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097M04.bB6Ng01-097M04.g
ACCDH908042DH908043
length1,236648
definitionDH908042|Mus musculus domesticus DNA, BAC clone: B6Ng01-097M04, 5' end.DH908043|Mus musculus domesticus DNA, BAC clone: B6Ng01-097M04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacgtagttgaatccttctcaacagtctgtgttgcgggaacactt
cattaccaccgttgttccccagctgaggtgttctgaatccaggctggatc
cttctcaacagtctgttttatgggaacacttcattaccatgacccgcagt
tctggttccggaatgagggatcttccttgcgctggtgatggtaaattccg
tcccgggttttctcgtcccgggttccggcaccaaatcttacacgcgttca
cgaccggccaggaaagacacaacaaaccggaatcttcaggagccagagag
caagagagcaagagagtaagagctttattgcttacatcttcaggagccag
agagcaagagagagaatggcgaaaccccgtcccttttaaggagaattatc
ctccgcctaggacatgtccatgtcactccctgattggctgcagcccattg
gccaagttgtcgtcacggggaaggcagagcacatggagtggagaactacc
cttggcacatgcgcagattatttgtttaccacttagaacacaggatgtca
gcgccatcttgtaacggcaaatgtgagggtggctccctacaattcagcta
ttaataacgaggacattgtgaattttgtaggcaaacgtatggaactagaa
aatatcatcctgagtgaggtaacccagacacaaaaggacatgcatggtat
ttattcactgataaatggatattagcccaaaagtacataatacccatagt
acaactcacagacattataaagtttaacaagaaggaaagcccaagtaagg
atgcttccgtaccacatagaaaggggagaacaaaataatcaagggaggca
gagggagagagggacctaggtggaagaggggaggcgggtagggagcagat
taggtataagggacacagagagaagcccagagggtcatgagatggatgga
aatatccaggtgggagaatgttccaggactcatggaagatgaccttagct
gaattcccacagtggggagatacaacctggagaaacccaacttaggatct
atcccatggagtgtccaaatctgaattgttactgatgccattggtgcttt
taactgatcctacatggctactttcgaagaggcttatcggcagtgactgg
tacgtgctatattttaagtcagcattgaattgatcagggcctatggaaga
ttttgtcagattaatgggattcagcatgcgtcatct
gaattctcaacacagggatcttgaatggctaagaagcacttaaagaaata
ttcaatgtctttattcaccaggaaaatgaaaatcaaaacaaccctgagat
tccatcttatacccttcagaattgctaagaacaaaatctcaagaaacaga
gcaggctgacaagaatgcagagagatggtaatactcctccattgctggtg
gtcatgcaaacttgtaaaaccacttgagaaattggtctaggaatttctca
gaaaattggatggaaatagtcgtatgtgaagacccagctataccgctgat
gggcatatacccaaaagacattccaccataccacaaggacaggtgctcca
ttatgttcctaacagcatgtaaactgtaaagaaactagatatccagcagc
cgaagaatggatacagaacatgtggttcatttatacaatggaatatattc
agttattaaaaacaaggacatcctgaatttgtagacaaatgggtagacct
agaaaagattatcccccggagctcgtgtctctagctgcatctgtatcaga
agatggcctagtcagctatcagtggaaagagaggcccattggtcgtgcaa
actttgtatgcctcagtacagggaaacgccagggccaagaagtgggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_32631616_32631704
seq2: B6Ng01-097M04.g_581_716 (reverse)

seq1  CTCCCACTTCTTGGCCCTG-------------------------------  19
      |||||||||||||||||||                               
seq2  CTCCCACTTCTTGGCCCTGGCGTTTCCCTGTACTGAGGCATACAAAGTTT  50

seq1  GCAAGACCCATGGGCCTCTCTTTCCACTGA----------------CTTC  53
      ||| |||| |||||||||||||||||||||                ||||
seq2  GCACGACCAATGGGCCTCTCTTTCCACTGATAGCTGACTAGGCCATCTTC  100

seq1  TGATACATACGCAGCTAGAGACACGAGCTCCGGGGG  89
      ||||||| | ||||||||||||||||||||||||||
seq2  TGATACAGATGCAGCTAGAGACACGAGCTCCGGGGG  136