BAC Information

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BAC

Clone NameB6Ng01-098L09
Chromosome12 (Build37)
Map Location 21,408,031 - 21,551,375
singlet/doubletdoublet
Overlap geneYwhaq, LOC100043407
Upstream geneLOC100042751, LOC100043371, EG668455, LOC100042755, LOC100043377, LOC625810, 1700030C10Rik, 3110053B16Rik, LOC668698, LOC546752, EG629257, Ddef2, Itgb1bp1, Cpsf3, Iah1, Adam17
Downstream geneLOC100042796, 6030426L16Rik, LOC434693, EG668645, EG668646, LOC100043416, LOC668650, EG668496, LOC668653, EG432637
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098L09.bB6Ng01-098L09.g
ACCDH908724DH908725
length772526
definitionDH908724|Mus musculus domesticus DNA, BAC clone: B6Ng01-098L09, 5' end.DH908725|Mus musculus domesticus DNA, BAC clone: B6Ng01-098L09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,550,605 - 21,551,375)(21,408,031 - 21,408,562)
sequence
gaattcagccattgagtgagtgataccgatgcactgtttaggagtcaggc
cacataccacccggaaacttcaattttgagaacataatcaagttcgtgaa
tggcacattacttacatctgtgtcaggaagtacagtaatatttgccttct
ttggtaaggccccaggagacagcagcacactgagaacagcggtctctgaa
cgctttctgtggaaggcagaaatctgttattgtcaggccaacacactgca
ccatggttctgaactctacttctagtgttcctggcaatttcatcccccca
aattaaaaaacaatcaaactaaaaatacacagacagtatataaaaataag
gagaatttagtctctctctctttttttaagatttgtttattattataaat
aagtacacggttgctgtcttcagatgcaccagaagagggcgtcagatctc
attacgggtggttgtgagtcaccatgtggttactgggaattgaactcagg
acctttggaagagcagtcagtgctcttacccgctgagccatcttgccagc
ctgagtctcgtctctttagtagcatgaaatgcagtaaccattccataaaa
ctactgaaatatacagagtgagaacaagaaagaaaggtggacagggctag
attggaaacaaagatataggtaaactctctgggagagctgagggagaaaa
ggatgacccaccgtatggatgatcaaagcaacaaagatttgaaaacactg
ttgactttttttttaggggcac
ttaaactatctgtgaacaagctataaataaagtgccaactatgatacaat
ctgggaagtctggaaagtaacccagaataagactgttaaattcaaataaa
tctaatattgaagaaaaagatctatttaccagatctcaaataacatgtgg
ggaaaagatctaatgaaaattgcccaacaaaatgcaaccactgtgtcaga
ttgatagaaatgaggaaaaaaaaaggaccgaaattatttaaatttaaaaa
atttatgaggatgtagagatggctcagtggttaagagccacttgtttata
cagacaatctggattcaattcctagcacttacatggtgttttataactat
ctaacccaggggtctgttgccctcttctgacattttgtggtactagccat
gcatatggtgcacttatgcaggtaaaacactcaaatacataaaataaatc
tttaaaaagaaaaacaaaattaacgttacattcttttttttttttttttt
ttttttgggtttttgagacagggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_21550605_21551375
seq2: B6Ng01-098L09.b_49_820 (reverse)

seq1  GTGCCCC-AAAGAAAAAGTCAACAGTGTTTTC-AATCTTTGTTTGCTTTG  48
      ||||||| ||| |||||||||||||||||||| |||||||| ||||||||
seq2  GTGCCCCTAAAAAAAAAGTCAACAGTGTTTTCAAATCTTTG-TTGCTTTG  49

seq1  ATCATCCATACGGTGGGTCATCCTTTTCTCCCTCAGCTCTCCCAGAGAGT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCATACGGTGGGTCATCCTTTTCTCCCTCAGCTCTCCCAGAGAGT  99

seq1  TTACCTATATCTTTGTTTCCAATCTAGCCCTGTCCACCTTTCTTTCTTGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATATCTTTGTTTCCAATCTAGCCCTGTCCACCTTTCTTTCTTGT  149

seq1  TCTCACTCTGTATATTTCAGTAGTTTTATGGAATGGTTACTGCATTTCAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTCTGTATATTTCAGTAGTTTTATGGAATGGTTACTGCATTTCAT  199

seq1  GCTACTAAAGAGACGAGACTCAGGCTGGCAAGATGGCTCAGCGGGTAAGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTAAAGAGACGAGACTCAGGCTGGCAAGATGGCTCAGCGGGTAAGA  249

seq1  GCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGTAACCACAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGTAACCACAT  299

seq1  GGTGACTCACAACCACCCGTAATGAGATCTGACGCCCTCTTCTGGTGCAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTCACAACCACCCGTAATGAGATCTGACGCCCTCTTCTGGTGCAT  349

seq1  CTGAAGACAGCAACCGTGTACTTATTTATAATAATAAACAAATCTTAAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGACAGCAACCGTGTACTTATTTATAATAATAAACAAATCTTAAAA  399

seq1  AAAGAGAGAGAGACTAAATTCTCCTTATTTTTATATACTGTCTGTGTATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGAGAGACTAAATTCTCCTTATTTTTATATACTGTCTGTGTATT  449

seq1  TTTAGTTTGATTGTTTTTTAATTTGGGGGGATGAAATTGCCAGGAACACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTGATTGTTTTTTAATTTGGGGGGATGAAATTGCCAGGAACACT  499

seq1  AGAAGTAGAGTTCAGAACCATGGTGCAGTGTGTTGGCCTGACAATAACAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAGAGTTCAGAACCATGGTGCAGTGTGTTGGCCTGACAATAACAG  549

seq1  ATTTCTGCCTTCCACAGAAAGCGTTCAGAGACCGCTGTTCTCAGTGTGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGCCTTCCACAGAAAGCGTTCAGAGACCGCTGTTCTCAGTGTGCT  599

seq1  GCTGTCTCCTGGGGCCTTACCAAAGAAGGCAAATATTACTGTACTTCCTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTCCTGGGGCCTTACCAAAGAAGGCAAATATTACTGTACTTCCTG  649

seq1  ACACAGATGTAAGTAATGTGCCATTCACGAACTTGATTATGTTCTCAAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGATGTAAGTAATGTGCCATTCACGAACTTGATTATGTTCTCAAAA  699

seq1  TTGAAGTTTCCGGGTGGTATGTGGCCTGACTCCTAAACAGTGCATCGGTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTTTCCGGGTGGTATGTGGCCTGACTCCTAAACAGTGCATCGGTA  749

seq1  TCACTCACTCAATGGCTGAATTC  771
      |||||||||||||||||||||||
seq2  TCACTCACTCAATGGCTGAATTC  772

seq1: chr12_21408031_21408562
seq2: B6Ng01-098L09.g_67_598

seq1  GAATTCTTAAACTATCTGTGAACAAGCTATAAATAAAGTGCCAACTATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAACTATCTGTGAACAAGCTATAAATAAAGTGCCAACTATGA  50

seq1  TACAATCTGGGAAGTCTGGAAAGTAACCCAGAATAAGACTGTTAAATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATCTGGGAAGTCTGGAAAGTAACCCAGAATAAGACTGTTAAATTCA  100

seq1  AATAAATCTAATATTGAAGAAAAAGATCTATTTACCAGATCTCAAATAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATCTAATATTGAAGAAAAAGATCTATTTACCAGATCTCAAATAAC  150

seq1  ATGTGGGGAAAAGATCTAATGAAAATTGCCCAACAAAATGCAACCACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGGAAAAGATCTAATGAAAATTGCCCAACAAAATGCAACCACTGT  200

seq1  GTCAGATTGATAGAAATGAGGAAAAAAAAAGGACCGAAATTATTTAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATTGATAGAAATGAGGAAAAAAAAAGGACCGAAATTATTTAAATT  250

seq1  TAAAAAATTTATGAGGATGTAGAGATGGCTCAGTGGTTAAGAGCCACTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATTTATGAGGATGTAGAGATGGCTCAGTGGTTAAGAGCCACTTG  300

seq1  TTTATACAGACAATCTGGATTCAATTCCTAGCACTTACATGGTGTTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACAGACAATCTGGATTCAATTCCTAGCACTTACATGGTGTTTTAT  350

seq1  AACTATCTAACCCAGGGGTCTGTTGCCCTCTTCTGACATTTTGTGGTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATCTAACCCAGGGGTCTGTTGCCCTCTTCTGACATTTTGTGGTACT  400

seq1  AGCCATGCATATGGTGCACTTATGCAGGTAAAACACTCAAATACATAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGCATATGGTGCACTTATGCAGGTAAAACACTCAAATACATAAAA  450

seq1  TAAATCTTTAAAAAGAAAAACAAAATTAACGTTACATTCTTTTTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTTTAAAAAGAAAAACAAAATTAACGTTACATTCTTTTTTTTTTT  500

seq1  TTTTTTTTTTTTGGTTTTTTGAGACAGGGTTT  532
      |||||||||||||| |||||||||||||||||
seq2  TTTTTTTTTTTTGGGTTTTTGAGACAGGGTTT  532