BAC Information

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BAC

Clone NameB6Ng01-099P05
Chromosome12 (Build37)
Map Location 61,620,511 - 61,621,322
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665644, EG622488
Downstream geneLOC665665, Ppia-ps12_475.1, LOC100040300, LOC665677, Nanog-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099P05.bB6Ng01-099P05.g
ACCDH909598DH909599
length1,169995
definitionDH909598|Mus musculus domesticus DNA, BAC clone: B6Ng01-099P05, 5' end.DH909599|Mus musculus domesticus DNA, BAC clone: B6Ng01-099P05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatttagttttataccccatttttaattgggttatttggggttt
ggcttctaatttcttgagttctttatcaattttgaatgttagtcctctga
aacatatggcgttgaggaagatcgcttcctaatctgtaggttgctcattt
gtcctaatggcagtgtcttttgccttacagaagctatacagtttcataag
gtcccatttatcaattgttgatcttaagagtccgagccattgatgttctc
ttcagaaatttgaatttgtgcctgtaccaatgatcaagggtattttttag
tttctattctatgagatttagtgtatctgactgtatgttgaggtccttga
accacatggacttgagttttatgcagggtgatatataatttttctacatg
taggcatcctgtcaattcagcagaaattgttgaagatgctctaatttttc
cattgtatgcttttgccttctttatcaaaaatcaagtgtccataggtgtg
tgagcttatttctggtgtcttttattcagtttcattgatcagcatgtctg
cttcactactcattccatgcagtttttatcactattgctctgtagtacag
cttgtgctttctcctgaagttattttattgtctaggattgttttggctct
cctgcattttgtttttccatacatagctaattgctctttcaaggtctata
aaaaattatgttggaattttgatggggattacattgaatctgtagattgt
ttttggtaagatagccattctcactatgttaatcctacctatccatgagt
tttggaaaaatttacatcttctgatatcttctttaatttctttcttaaga
aaacgtgaagttcttttcattcagttctccacttactttgttagagttac
atcaagacattttatattattcatagctattaccaacagtgttgtttccc
taattttttacttggcctgtttatcatttttgtaaaggaaggatacgatt
tctttgatttatgttgtgtcagatcctgtgctgagaatcctctggtagaa
ttttgaattgcttagtgtattatcaattatcgtaaaaacatactttaact
tcttccatttcatttgatccatggattcttttgtgtttttatgctttgaa
ctagacattcacagatcca
gaattctctgtttagcttttttccttatttttaaattggctcatttggtt
tgttgctgtttaacagctttcttataaaagccaggacccccaacccaggt
gtggcaccacccatagtgggcttggcccttcccatcagacactaggaaaa
ttccttacagctggattttacagaggcattttctcaattgaggttcactc
ttttcagataactctagtttgtatgtcaagttaacataagacttgccatt
tgagtgtattacaaattttttttaaacttattgttttgagccagagtcta
tgactgttcagcttctggctagcctatgacttttaggatctgcctatctc
tgtcccctaatgctgtcataacaaccatatatagccatgctcagtctttt
ttattgggtgctggggatgtgaattcaggttcgcatgctttcataggaag
cccctagctctcctttacattctgagagcagctttgactccctcctcttc
ctccagtcatttcttctcacatcttctccgctgtcatacccctaacatct
ctactcaaagaagggtaggcctcctgttgatatgaaccagacttggcata
taaagtagcagttaggggagaggggtccaaaagcaggcaatagaatcaaa
gacagcccctcctctagttgctagggtcccacttgaagatcaagttgcat
atctattacatatattatgaggcctagttacattccatgcatgctcagtg
gttagggattcagtttctctgagcacctaggccccggttagttaatacat
cttgtgatgtatgtacttgatacctctgtatatgttacagttttattata
tgcatatgtaatacattctttatccattaatttattgaagtatacctagt
gttgtccaatgtttgggctatttcaaatatactagtaataaatatgatgt
actctgtgatatgcgcctttaaatgatgcaactaaaaaaccagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_61620511_61621322
seq2: B6Ng01-099P05.g_68_879 (reverse)

seq1  ATACATCACAAGATGTATTAACTAACCGGGGCCTAGGTGCTCAGAGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCACAAGATGTATTAACTAACCGGGGCCTAGGTGCTCAGAGAAAC  50

seq1  TGAATCCCTAACCACTGAGCATGCATGGAATGTAACTAGGCCTCATAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCCTAACCACTGAGCATGCATGGAATGTAACTAGGCCTCATAATA  100

seq1  TATGTAATAGATATGCAACTTGATCTTCAAGTGGGACCCTAGCAACTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAATAGATATGCAACTTGATCTTCAAGTGGGACCCTAGCAACTAGA  150

seq1  GGAGGGGCTGTCTTTGATTCTATTGCCTGCTTTTGGACCCCTCTCCCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGCTGTCTTTGATTCTATTGCCTGCTTTTGGACCCCTCTCCCCTA  200

seq1  ACTGCTACTTTATATGCCAAGTCTGGTTCATATCAACAGGAGGCCTACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTACTTTATATGCCAAGTCTGGTTCATATCAACAGGAGGCCTACCC  250

seq1  TTCTTTGAGTAGAGATGTTAGGGGTATGACAGCGGAGAAGATGTGAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGAGTAGAGATGTTAGGGGTATGACAGCGGAGAAGATGTGAGAAG  300

seq1  AAATGACTGGAGGAAGAGGAGGGAGTCAAAGCTGCTCTCAGAATGTAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACTGGAGGAAGAGGAGGGAGTCAAAGCTGCTCTCAGAATGTAAAG  350

seq1  GAGAGCTAGGGGCTTCCTATGAAAGCATGCGAACCTGAATTCACATCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTAGGGGCTTCCTATGAAAGCATGCGAACCTGAATTCACATCCCC  400

seq1  AGCACCCAATAAAAAAGACTGAGCATGGCTATATATGGTTGTTATGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCAATAAAAAAGACTGAGCATGGCTATATATGGTTGTTATGACAG  450

seq1  CATTAGGGGACAGAGATAGGCAGATCCTAAAAGTCATAGGCTAGCCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGGGACAGAGATAGGCAGATCCTAAAAGTCATAGGCTAGCCAGAA  500

seq1  GCTGAACAGTCATAGACTCTGGCTCAAAACAATAAGTTTAAAAAAAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAACAGTCATAGACTCTGGCTCAAAACAATAAGTTTAAAAAAAATTT  550

seq1  GTAATACACTCAAATGGCAAGTCTTATGTTAACTTGACATACAAACTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATACACTCAAATGGCAAGTCTTATGTTAACTTGACATACAAACTAGA  600

seq1  GTTATCTGAAAAGAGTGAACCTCAATTGAGAAAATGCCTCTGTAAAATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTGAAAAGAGTGAACCTCAATTGAGAAAATGCCTCTGTAAAATCC  650

seq1  AGCTGTAAGGAATTTTCCTAGTGTCTGATGGGAAGGGCCAAGCCCACTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTAAGGAATTTTCCTAGTGTCTGATGGGAAGGGCCAAGCCCACTAT  700

seq1  GGGTGGTGCCACACCTGGGTTGGGGGTCCTGGCTTTTATAAGAAAGCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTGCCACACCTGGGTTGGGGGTCCTGGCTTTTATAAGAAAGCTGT  750

seq1  TAAACAGCAACAAACCAAATGAGCCAATTTAAAAATAAGGAAAAAAGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGCAACAAACCAAATGAGCCAATTTAAAAATAAGGAAAAAAGCTA  800

seq1  AACAGAGAATTC  812
      ||||||||||||
seq2  AACAGAGAATTC  812