BAC Information

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BAC

Clone NameB6Ng01-100D14
Chromosome12 (Build37)
Map Location 59,685,908 - 59,687,046
singlet/doubletsinglet
Overlap genenone
Upstream gene4921506M07Rik, EG217600, BC042761, Sstr1, Clec14a
Downstream geneLOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33, LOC665628, LOC238199, LOC665639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100D14.bB6Ng01-100D14.g
ACCDH909784DH909785
length1,0811,130
definitionDH909784|Mus musculus domesticus DNA, BAC clone: B6Ng01-100D14, 5' end.DH909785|Mus musculus domesticus DNA, BAC clone: B6Ng01-100D14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttgtgattgggttatctcactcaggatgatgccctccaggtc
catccatttgcctaggaatttcataaattcattctttttaatagctgagt
agtactccattgtgtaaatgtaccacattttctgtatccattcctctgtt
gaggggcatctgggttctttgcagcttctggttattataaataagactgc
tatgaacatagtggagcatgtgtccttcttaccggttggaacatcttctg
gatataggtccaggagaggtattgcaggatcctccggtagtactatgtcc
aattttctgaggaaatgccagactaatttccagagtggttgtacaagctt
gcaatcccaccaacaatggaagagtgttcccctttctccacatcctcctc
agcatctgctgtcacctgaatttttgatcttagccattctgactggtgtg
aggtagaatttcagggttgctttgatttgcatttccctgatgattaagga
tgctgaacatattttcaggtgcttctctgccattcggtattcctcaggtg
aggattctttgttcagctctcagccccattttttaatggggttatttgat
tttctggagtccaccttcttgagttctttatatatattggatattagtcc
cctatctgatttaggataggtaaagatcctttcccaatctgttggtggcc
tttttttcttatttacagtgtctttttgccttacagaagctttgcaattt
tatgaggtcccatttgtcgattctcgatcttacagctcaagccattgctg
ttctattcaggaattttccccctgtgctcatatctttgaggcttttcccc
actttctactctataagtttcagtgtctctggttttatgtggagcttcct
tgatccactagatttgacctttagtacaaggatattaggaatggatcaat
tagcattcttctacatgataaccaccaggtgtgccagcacatttgttgaa
atgctgtcttttttcactggatgttttagcttccttgtgaaatcaatgga
ccatggtgtgggggtcaatttctgggtctca
gaattcctcctattgtaaagtctgactatgcttattgatctcgagtaaca
tcacaaaaaaaaaaggactagaaagaacagagtccaggcaggctcagaca
gagcagggcaaattggagaagaaatctgaaaatggatcccctaaagacaa
ttagcttaattgtttccatgggcatccactgaattctgtgcctattgatc
agctttcctgataattagactaaacgacctggaccatctctatacaatca
cttgcattctaccgagcacatagttagttcctcttgtcttttgatatgga
ttcagcttttatgtcacaggctggaggcaattcttttgatatttaaaata
gaaaaggcaaatatatgagttaccatcttcgagagaagaaatagatgaag
aaaatcaaatatgagtcgtttaataagtttcctctattctgaaattctaa
aatcctatactctgtctctaataatttatttatagctatacacagacttc
aagtttagctttgaaggacacatttgaagaaggcgaaacttgtgctttcc
cagaaaaacaaagtaatttttaattgttgaacttgcagggaaactcctga
ttaactgataattaaagaaacttaatatatggagcatatttcaaggagtt
agagctggccttccaacacgggctaagaggaaatgagtttctgaaggaca
gcaaagctgaaggggcatactggcaatggagaagagatctggccaggtga
ccccaaaggtcccttccagaagtgacatcatgcagatagagagctgtgag
aggtgtgcccgtagagcaagaaagcagcctaggtctcattcccattgggc
tgagaaacaaggcagcgaaatctacttttgcaactggataaaatccctgt
aaattagctgttaaatacaaaagctactacacaaagactttttaatatca
ttattttgggtgttgggtggagaaacctccacagtctgtttcaaaccctg
atgccatagagcagaggtaaatctggacaaaggtatggcagagaaggagt
agtgaggacggtaggaattacttcaacgtctgtagtaagtagaagagctg
aaggtgggcaacactaatagtatattcgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_59685908_59687046
seq2: B6Ng01-100D14.g_68_1197

seq1  GAATTCCTCCTATTGTAAAGTCTGACTATGCTTATTGATCTCGAGTAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTATTGTAAAGTCTGACTATGCTTATTGATCTCGAGTAACA  50

seq1  TCACAAAAAAAAAAGGACTAGAAAGAACAGAGTCCAGGCAGGCTCAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAAAAAAAAGGACTAGAAAGAACAGAGTCCAGGCAGGCTCAGACA  100

seq1  GAGCAGGGCAAATTGGAGAAGAAATCTGAAAATGGATCCCCTAAAGACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGGCAAATTGGAGAAGAAATCTGAAAATGGATCCCCTAAAGACAA  150

seq1  TTAGCTTAATTGTTTCCATGGGCATCCACTGAATTCTGTGCCTATTGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTAATTGTTTCCATGGGCATCCACTGAATTCTGTGCCTATTGATC  200

seq1  AGCTTTCCTGATAATTAGACTAAACGACCTGGACCATCTCTATACAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCCTGATAATTAGACTAAACGACCTGGACCATCTCTATACAATCA  250

seq1  CTTGCATTCTACCGAGCACATAGTTAGTTCCTCTTGTCTTTTGATATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATTCTACCGAGCACATAGTTAGTTCCTCTTGTCTTTTGATATGGA  300

seq1  TTCAGCTTTTATGTCACAGGCTGGAGGCAATTCTTTTGATATTTAAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTTTTATGTCACAGGCTGGAGGCAATTCTTTTGATATTTAAAATA  350

seq1  GAAAAGGCAAATATATGAGTTACCATCTTCGAGAGAAGAAATAGATGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGCAAATATATGAGTTACCATCTTCGAGAGAAGAAATAGATGAAG  400

seq1  AAAATCAAATATGAGTCGTTTAATAAGTTTCCTCTATTCTGAAATTCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAAATATGAGTCGTTTAATAAGTTTCCTCTATTCTGAAATTCTAA  450

seq1  AATCCTATACTCTGTCTCTAATAATTTATTTATAGCTATACACAGACTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTATACTCTGTCTCTAATAATTTATTTATAGCTATACACAGACTTC  500

seq1  AAGTTTAGCTTTGAAGGACACATTTGAAGAAGGCGAAACTTGTGCTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAGCTTTGAAGGACACATTTGAAGAAGGCGAAACTTGTGCTTTCC  550

seq1  CAGAAAAACAAAGTAATTTTTAATTGTTGAACTTGCAGGGAAACTCCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAACAAAGTAATTTTTAATTGTTGAACTTGCAGGGAAACTCCTGA  600

seq1  TTAACTGATAATTAAAGAAACTTAATATATGGAGCATATTTCAAGGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGATAATTAAAGAAACTTAATATATGGAGCATATTTCAAGGAGTT  650

seq1  AGAGCTGGCCTTCCAACACGGGCTAAGAGGAAATGAGTTTCTGAAGGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGGCCTTCCAACACGGGCTAAGAGGAAATGAGTTTCTGAAGGACA  700

seq1  GCAAAGCTGAAGGGGCATACTGGCAATGGAGAAGAGATCTGGCCAGGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCTGAAGGGGCATACTGGCAATGGAGAAGAGATCTGGCCAGGTGA  750

seq1  CCCCAAAGGTCCCTTCCAGAAGTGACATCATGCAGATAGAGAGCTGTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAGGTCCCTTCCAGAAGTGACATCATGCAGATAGAGAGCTGTGAG  800

seq1  AGGTGTGCCCGTAGAGCAAGAAAGCAGCCTAGGTCTCATTCCCATTGGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGCCCGTAGAGCAAGAAAGCAGCCTAGGTCTCATTCCCATTGGGC  850

seq1  TGAGAAACAAGGCAGCGAAATCTACTTTTGCAACTGGAT-AAATCCCTGT  899
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGAGAAACAAGGCAGCGAAATCTACTTTTGCAACTGGATAAAATCCCTGT  900

seq1  AAATTAGCTGTTAAATACAAAAGCTACTACACAAAGACCTTTTAAATATC  949
      ||||||||||||||||||||||||||||||||||||| ||||| ||||||
seq2  AAATTAGCTGTTAAATACAAAAGCTACTACACAAAGA-CTTTTTAATATC  949

seq1  ATTATTTTGGGTGTTGGGTGGAGAAACCTCCACAGTCTGTTTCAAACCCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTGGGTGTTGGGTGGAGAAACCTCCACAGTCTGTTTCAAACCCT  999

seq1  GATGCCATAGAAGCAGAGAGTAGAACCGGACAAAGGTATGGCAGAGGAAG  1049
      |||||||||| ||||||| ||| | | |||||||||||||||||||  | 
seq2  GATGCCATAG-AGCAGAG-GTAAATCTGGACAAAGGTATGGCAGAG--AA  1045

seq1  GGAGTAGTGAGGACGGTTAGGAATAACCTCTAACGTTCTGTAGTATAGTA  1099
      |||||||||||||||| ||||||| || || |||| ||||||||| ||||
seq2  GGAGTAGTGAGGACGG-TAGGAATTACTTC-AACG-TCTGTAGTA-AGTA  1091

seq1  AGAGAGCTG-AGGTTGGCAACAATTAATAGTATATTTCGAT  1139
        ||||||| |||| |||||| | |||||||||| ||||||
seq2  GAAGAGCTGAAGGTGGGCAAC-ACTAATAGTATA-TTCGAT  1130